Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,521,187 A→G V88A (GTT→GCT)  hofO ← DNA utilization protein HofO

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,521,1870AG99.4% 1415.9 / ‑4.3 343V88A (GTT→GCT) hofODNA utilization protein HofO
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (165/176);  total (166/177)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 343 total aligned reads displayed.

TGACGTTGCGCTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAACCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGCGATACAGTGCGGC  >  NC_000913/3521089‑3521284
                                                                                                  |                                                                                                 
tGACGTTGCGCTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGcc                                                                                                 <  2:6787993/101‑1 (MQ=255)
 gACGTTGCGCTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCa                                                                                                >  2:6788432/1‑101 (MQ=255)
  aCGTTGCGCTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAg                                                                                               >  1:6788435/1‑101 (MQ=255)
  aCGTTGCGCTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAg                                                                                               <  1:6788086/101‑1 (MQ=255)
    gTTGCGCTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGtt                                                                                             >  1:6788441/1‑101 (MQ=255)
    gTTGCGCTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGtt                                                                                             >  2:6788443/1‑101 (MQ=255)
     ttGCGCTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTg                                                                                            <  1:6787920/101‑1 (MQ=255)
      tGCGCTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTgc                                                                                           <  2:6787857/101‑1 (MQ=255)
      tGCGCTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTgc                                                                                           <  1:6788051/101‑1 (MQ=255)
       gcgcTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTgcg                                                                                          >  1:2257098/1‑101 (MQ=255)
       gcgcTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTgcg                                                                                          >  1:6788447/1‑101 (MQ=255)
       gcgcTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTgcg                                                                                          <  1:6787891/101‑1 (MQ=255)
        cgcTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTgcgc                                                                                         >  2:6788451/1‑101 (MQ=255)
        cgcTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTgcgc                                                                                         >  1:6788453/1‑101 (MQ=255)
        cgcTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTgcgc                                                                                         <  1:6787828/101‑1 (MQ=255)
          ctctGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTgcgcgc                                                                                       >  2:6788458/1‑101 (MQ=255)
           tctGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGcc                                                                                      >  1:6788459/1‑101 (MQ=255)
             tGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCgg                                                                                    <  1:6788108/101‑1 (MQ=255)
                cAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATa                                                                                 >  2:6788464/1‑101 (MQ=255)
                    cGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTg                                                                             >  1:6788469/1‑101 (MQ=255)
                     gtgtAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGa                                                                            <  1:6787871/101‑1 (MQ=255)
                     gtgtAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGa                                                                            >  2:6788470/1‑101 (MQ=255)
                      tgtAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGaa                                                                           >  1:6788474/1‑101 (MQ=255)
                         aaaTGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAAt                                                                        >  1:6788480/1‑101 (MQ=255)
                         aaaTGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAAt                                                                        >  2:6788482/1‑101 (MQ=255)
                         aaaTGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAAt                                                                        <  1:6787938/101‑1 (MQ=255)
                          aaTGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATc                                                                       <  2:6788380/101‑1 (MQ=255)
                           aTGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATcc                                                                      <  2:6787960/101‑1 (MQ=255)
                           aTGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATcc                                                                      >  1:6788485/1‑101 (MQ=255)
                            tGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTgcgcgc                                                                                       >  2:6788487/1‑83 (MQ=255)
                              ccGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGt                                                                   <  1:6788131/101‑1 (MQ=255)
                               cGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGt                                                                   <  1:6787953/100‑1 (MQ=255)
                               cGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTg                                                                  <  2:6788189/101‑1 (MQ=255)
                               cGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTg                                                                  <  2:6787895/101‑1 (MQ=255)
                               cGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTg                                                                  >  1:6788493/1‑101 (MQ=255)
                                gACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTgg                                                                 >  2:6788494/1‑101 (MQ=255)
                                gACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTgg                                                                 <  2:6787875/101‑1 (MQ=255)
                                 aCGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGc                                                                <  1:6788158/101‑1 (MQ=255)
                                  cGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCg                                                               <  2:6788097/101‑1 (MQ=255)
                                    gCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGaa                                                             <  2:6787574/101‑1 (MQ=255)
                                     cACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGaaa                                                            >  1:6788499/1‑101 (MQ=255)
                                     cACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGaaa                                                            <  1:6787989/101‑1 (MQ=255)
                                      aCTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGaaaa                                                           >  1:6788504/1‑101 (MQ=255)
                                      aCTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGaaaa                                                           <  2:6788034/101‑1 (MQ=255)
                                      aCTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGaaaa                                                           >  2:6788501/1‑101 (MQ=255)
                                         gCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAggg                                                        >  2:6788508/1‑101 (MQ=255)
                                          cTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGaa                                                                           <  2:6787916/81‑1 (MQ=255)
                                          cTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGc                                                       <  1:6787976/101‑1 (MQ=255)
                                          cTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGc                                                       <  1:6788021/101‑1 (MQ=255)
                                          cTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGc                                                       <  1:6787843/101‑1 (MQ=255)
                                            tCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAg                                                     >  1:6788513/1‑101 (MQ=255)
                                             cccACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTgg                                                                 <  2:6787772/88‑1 (MQ=255)
                                             cccACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGc                                                    >  2:6788515/1‑101 (MQ=255)
                                              ccACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCg                                                   <  2:6787823/101‑1 (MQ=255)
                                                 caGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCg                                                               <  2:6787939/86‑1 (MQ=255)
                                                 caGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGttt                                                <  1:6787749/101‑1 (MQ=255)
                                                  aGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGtttt                                               >  2:6788519/1‑101 (MQ=255)
                                                   gCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGttttt                                              >  1:6788520/1‑101 (MQ=255)
                                                    cGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGtttttt                                             <  1:6787804/101‑1 (MQ=255)
                                                    cGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGtttttt                                             <  1:6787908/101‑1 (MQ=255)
                                                     gTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGtt                                                 >  2:6788525/1‑96 (MQ=255)
                                                     gTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTc                                            <  2:6787755/101‑1 (MQ=255)
                                                       tttCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCt                                          <  1:6788204/101‑1 (MQ=255)
                                                       tttCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCt                                          <  2:6788145/101‑1 (MQ=255)
                                                          cAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGc                                       >  2:6788530/1‑101 (MQ=255)
                                                          cAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGc                                       <  2:6788252/101‑1 (MQ=255)
                                                          cAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGc                                       <  2:6788044/101‑1 (MQ=255)
                                                          cAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGc                                       >  1:6788531/1‑101 (MQ=255)
                                                           aaCGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCt                                      <  1:6788334/101‑1 (MQ=255)
                                                           aaCGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCt                                      >  1:6788534/1‑101 (MQ=255)
                                                            aCGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTg                                     <  2:6787789/101‑1 (MQ=255)
                                                             cGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGa                                    >  2:6788538/1‑101 (MQ=255)
                                                              gCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGaa                                   <  1:6788006/101‑1 (MQ=255)
                                                               ccAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCa                                                      >  2:6788546/1‑81 (MQ=255)
                                                               ccAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAg                                  <  1:6787863/101‑1 (MQ=255)
                                                               ccAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAg                                  >  1:6788543/1‑101 (MQ=255)
                                                               ccAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAg                                  <  1:6788275/101‑1 (MQ=255)
                                                                cAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAgg                                 >  1:6788548/1‑101 (MQ=255)
                                                                 aaCTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAg                                                          >  1:6788551/1‑75 (MQ=255)
                                                                  aCTCGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCt                                          <  2:6787812/90‑1 (MQ=255)
                                                                     cGCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCg                            <  2:6788022/101‑1 (MQ=255)
                                                                      gCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCgg                           >  2:6788557/1‑101 (MQ=255)
                                                                      gCCTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCgg                           >  1:6788558/1‑101 (MQ=255)
                                                                       ccTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGgt                          <  2:6788066/101‑1 (MQ=255)
                                                                        cTCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGgtg                         >  2:6788562/1‑101 (MQ=255)
                                                                         tCCCTGCGCGGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAggg                                >  1:6788565/1‑93 (MQ=255)
                                                                               cgcgGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCt                                      >  1:6788572/1‑81 (MQ=255)
                                                                               cgcgGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCa                  >  2:6788571/1‑101 (MQ=255)
                                                                                 cgGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAgg                <  2:6787966/101‑1 (MQ=255)
                                                                                 cgGATGGATGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAgg                <  2:6787702/101‑1 (MQ=255)
                                                                                  ggatggatGCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGc               >  1:6788577/1‑101 (MQ=255)
                                                                                        atgCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGCGATACa         <  2:6788127/101‑1 (MQ=255)
                                                                                        atgCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGCGATACa         <  2:6788060/101‑1 (MQ=255)
                                                                                          gCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGCGATACAGt       >  1:6788582/1‑101 (MQ=255)
                                                                                          gCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGCGATACAGt       <  1:6788075/101‑1 (MQ=255)
                                                                                          gCCAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGCGATACAGt       >  2:6788585/1‑101 (MQ=255)
                                                                                            cAGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGCGATACAGTGc     >  1:6788586/1‑101 (MQ=255)
                                                                                             aGGAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGCGATACAGTGCg    >  2:6788591/1‑101 (MQ=255)
                                                                                              ggAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGCGAt            >  1:6788595/1‑92 (MQ=255)
                                                                                               gAAGCCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGCGATACAGTGCGGc  <  1:6788033/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
TGACGTTGCGCTCTGCCAGCCGTGTAAATGCCGACGGCACTGCTTCCCACAGCGTTTTCAACGCCAACTCGCCTCCCTGCGCGGATGGATGCCAGGAAACCAGTTGCGCGCCGGATAACTGAAAATCCAGTGGCGAAAAGGGCAGCGTTTTTTCCTCGCTGAAGGGAGCGGTGTCTACCAGGCGATACAGTGCGGC  >  NC_000913/3521089‑3521284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑