| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 597,290 | (A)7→8 | coding (160/333 nt) | cusF → | copper/silver export system periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 597,283 | 1 | . | A | 99.7% | 1360.2 / ‑3.2 | 313 | coding (153/333 nt) | cusF | copper/silver export system periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base A (148/164); total (149/164) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 364 total aligned reads displayed.
TAATGCCCAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑AAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAATGAGTGA > NC_000913/597184‑597378 | tAATGCCCAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑a < 1:1021552/101‑1 (MQ=255)tAATGCCCAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑a > 1:1022387/1‑101 (MQ=255) aaTGCCCAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑aa < 1:1021661/101‑1 (MQ=255) aTGCCCAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑aaa > 2:1022392/1‑101 (MQ=255) aTGCCCAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑aaa < 2:1021938/101‑1 (MQ=255) tGCCCAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑aaaa > 2:1022395/1‑101 (MQ=255) tGCCCAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑aaaa < 1:1021611/101‑1 (MQ=255) ccAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑aaaaaaa > 1:1022397/1‑101 (MQ=255) aGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑aaaaaaaat > 2:1022401/1‑99 (MQ=255) aGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑aaaaaaaat < 1:1021977/101‑3 (MQ=255) ggCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑aaaaaaaatc < 1:1021732/101‑4 (MQ=255) cTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑aaaaaaaatcac > 2:1022405/1‑96 (MQ=255) tAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCAcc > 2:1022410/1‑101 (MQ=255) tAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCAcc > 1:1022409/1‑101 (MQ=255) tAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑aaaaaaaatca < 2:1021866/99‑5 (MQ=255) aaCGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCAcca > 1:1022417/1‑101 (MQ=255) aaCGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCAcca < 2:1021982/101‑1 (MQ=255) aCGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCAccat > 2:1022418/1‑101 (MQ=255) gAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCAccatcc > 2:1022422/1‑101 (MQ=255) gAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCAccatcc > 1:1022424/1‑101 (MQ=255) aaCATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCAccatcca < 2:1021578/101‑1 (MQ=255) aCATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCAccatccat > 2:1022430/1‑101 (MQ=255) atcatGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGa > 1:1022438/1‑101 (MQ=255) atcatGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGa > 2:1022435/1‑101 (MQ=255) tcatGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGAt < 2:1022003/101‑1 (MQ=255) tcatGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGAt < 2:1021796/101‑1 (MQ=255) tcatGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGAt < 1:1021899/101‑1 (MQ=255) atGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATcc > 1:1022443/1‑101 (MQ=255) tGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCg < 2:1021960/101‑1 (MQ=255) aaaCCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGAt > 2:1022447/1‑96 (MQ=255) aaaCCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGAt > 1:1022446/1‑101 (MQ=255) aaaCCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGAt < 1:1021888/101‑1 (MQ=255) ccAAGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATtgc > 1:1022452/1‑101 (MQ=255) cATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCAccatc < 1:1021766/83‑1 (MQ=255) cATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATtgct < 2:1022162/101‑1 (MQ=255) cATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATtgct > 2:1022455/1‑101 (MQ=255) aTGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATtgctg < 1:1021366/101‑1 (MQ=255) aGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCg > 2:1022462/1‑101 (MQ=255) aGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCg > 1:1022463/1‑101 (MQ=255) gCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCTATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGt < 2:1021691/101‑1 (MQ=255) gCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGt < 1:1021708/101‑1 (MQ=255) gAAGCACGACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGa > 2:1022468/1‑101 (MQ=255) aaGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGaa < 1:1021810/101‑1 (MQ=255) aaGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGaa < 1:1022286/101‑1 (MQ=255) gCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACt < 2:1021780/101‑1 (MQ=255) cacaACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGacc < 1:1021748/99‑3 (MQ=255) acaACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTgg < 2:1021851/101‑1 (MQ=255) acaACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTgg > 1:1022473/1‑101 (MQ=255) acaACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTgg > 2:1022472/1‑101 (MQ=255) caACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAAc < 2:1021969/97‑1 (MQ=255) aaCCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGcc < 2:1021658/101‑1 (MQ=255) aaCCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGcc > 2:1022477/1‑101 (MQ=255) aaCCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGcc < 2:1021763/101‑1 (MQ=255) ccACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCgg < 1:1021840/101‑1 (MQ=255) acaGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGgag > 2:1022486/1‑101 (MQ=255) acaGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGgag > 1:1022483/1‑101 (MQ=255) aGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGcc < 2:1021818/95‑1 (MQ=255) aGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGAt < 1:1021832/101‑1 (MQ=255) ggTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATg < 1:1021802/101‑1 (MQ=255) ttattaGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCTATTGCTGCCGTGAACTGGCCGGAGATGAc > 2:1022493/1‑101 (MQ=255) ttattaGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGAc > 1:1022492/1‑101 (MQ=255) ttattaGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGAc < 2:1021725/101‑1 (MQ=255) tattaGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGAcc > 1:1022496/1‑101 (MQ=255) ttaGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCAt < 2:1021792/101‑1 (MQ=255) taGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATg > 1:1022504/1‑101 (MQ=255) taGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATg > 2:1022502/1‑101 (MQ=255) aGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATgc < 2:1021918/101‑1 (MQ=255) gcCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCCCCACCCATCACGATCCGATTGCTGCCGTGAACTGGCCgg < 2:1022021/86‑1 (MQ=255) gcCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATg > 2:1022508/1‑91 (MQ=255) cACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCttt < 2:1021890/101‑1 (MQ=255) cACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCttt > 1:1022511/1‑101 (MQ=255) aCTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTa < 1:1021998/101‑1 (MQ=255) tGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTAcc < 1:1022063/101‑1 (MQ=255) tGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTAcc > 2:1022514/1‑101 (MQ=255) ggCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCa < 1:1021861/101‑1 (MQ=255) gCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCCCCACCCATCACGATCCGATTGCTGCCGTGAACTGGcc < 2:1021423/77‑1 (MQ=255) cGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATc > 1:1022518/1‑101 (MQ=255) tGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCAc > 2:1022525/1‑101 (MQ=255) tGGTAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCAc > 1:1022524/1‑101 (MQ=255) tAAAGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCAcccc < 1:1021933/101‑1 (MQ=255) aaGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGc < 2:1022340/101‑1 (MQ=255) aaGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGc > 2:1022532/1‑101 (MQ=255) aaGGGTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGc > 1:1022531/1‑101 (MQ=255) gggTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAg < 1:1022039/101‑1 (MQ=255) gTATCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGAc < 1:1022151/101‑1 (MQ=255) aTCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGa > 2:1022539/1‑101 (MQ=255) aTCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGa > 1:1022540/1‑101 (MQ=255) tCGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGaa < 2:1021904/101‑1 (MQ=255) cGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGaaa > 2:1022543/1‑101 (MQ=255) cGATCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGaaa < 2:1021874/101‑1 (MQ=255) aTCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAAt > 2:1022551/1‑101 (MQ=255) aTCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAAt > 1:1022548/1‑101 (MQ=255) tCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGt < 2:1021698/49‑1 (MQ=39) tCTGGAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAATg > 1:1022555/1‑101 (MQ=255) ggAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAATGAGt > 1:1022559/1‑101 (MQ=255) ggAAAGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAATGAGt < 1:1021971/101‑1 (MQ=255) ggAAAGCAAAAAAAACCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAATGAGt < 2:1022089/101‑1 (MQ=255) aaaGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAATGAGTGa < 2:1021912/101‑1 (MQ=255) aaaGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAATGAGTGa < 1:1022110/101‑1 (MQ=255) aaaGCAAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAATGAGTGa < 2:1022237/101‑1 (MQ=255) | TAATGCCCAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGC‑AAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAATGAGTGA > NC_000913/597184‑597378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |