| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 868,422 | (C)8→10 | coding (903/1872 nt) | gsiA → | glutathione ABC transporter ATP binding subunit GsiA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 868,414 | 1 | . | C | 99.2% | 494.2 / ‑3.0 | 125 | coding (895/1872 nt) | gsiA | glutathione ABC transporter ATP binding subunit GsiA |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (55/69); total (56/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
| * | NC_000913 | 868,414 | 2 | . | C | 82.4% | 422.2 / 87.1 | 125 | coding (895/1872 nt) | gsiA | glutathione ABC transporter ATP binding subunit GsiA |
| Reads supporting (aligned to +/- strand): ref base . (13/9); new base C (43/60); total (56/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 184 total aligned reads displayed.
CCGTGCGCTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGTTTG > NC_000913/868314‑868506 || cGTGCGCTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑c > 1:1476848/1‑101 (MQ=255) gTGCGCTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cc > 2:1476849/1‑101 (MQ=255) tGCGCTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccc > 2:1476850/1‑101 (MQ=255) tGCGCTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccc < 1:1476616/101‑1 (MQ=255) gcgcTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACGTCCAGCGAAACAGG‑‑cccc < 1:1476464/101‑1 (MQ=255) gcgcTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccc > 1:1476853/1‑101 (MQ=255) cgcTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccc > 2:1476855/1‑101 (MQ=255) cgcTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccc > 1:1476854/1‑101 (MQ=255) gcTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccc > 1:1476858/1‑101 (MQ=255) tGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccc > 2:1476859/1‑101 (MQ=255) tGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccc < 2:1476433/101‑1 (MQ=255) ttAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccccc < 1:1476542/101‑3 (MQ=255) tAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccccca > 1:1476863/1‑98 (MQ=255) tAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccccccca > 2:1476862/1‑98 (MQ=255) aGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccccccccat > 1:1476867/1‑97 (MQ=255) gctgctGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccccccccatc < 2:1476487/101‑6 (MQ=255) gctgctGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccccccccatc < 1:1476427/101‑6 (MQ=255) gctgctGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccccccccatc < 2:1476575/101‑6 (MQ=255) gctgctGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccccatcg < 1:1476516/101‑6 (MQ=255) gctgctGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccccccc > 1:1476869/1‑96 (MQ=255) ctgctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGa < 1:1476480/101‑1 (MQ=255) ctgctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccc > 2:1476870/1‑95 (MQ=255) tgctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccccccc > 1:1476872/1‑94 (MQ=255) gctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccacccccc > 1:1476873/1‑93 (MQ=255) ctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGCa < 2:1476630/101‑1 (MQ=255) ttCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGa > 2:1476876/1‑101 (MQ=255) ttCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccccc > 2:1476877/1‑88 (MQ=255) cGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGaaaa < 2:1476502/101‑1 (MQ=255) cGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccccc > 2:1476881/1‑86 (MQ=255) gCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGaaa > 2:1476883/1‑99 (MQ=255) cAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACg < 2:1476497/101‑1 (MQ=255) cAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACg < 2:1476410/101‑1 (MQ=255) cAACTTAGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACg > 1:1476885/1‑101 (MQ=255) aaCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGc > 1:1476887/1‑91 (MQ=255) ttGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccccc > 2:1476890/1‑80 (MQ=255) tGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACggtggt < 2:1476223/101‑1 (MQ=255) tGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACggtggt < 2:1476588/101‑1 (MQ=255) tGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACggtggt < 2:1476592/101‑1 (MQ=255) gTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGa < 2:1476546/101‑1 (MQ=255) gCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccccc < 2:1476505/77‑3 (MQ=255) cGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGATgg > 2:1476895/1‑101 (MQ=255) cGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccccc > 2:1476897/1‑74 (MQ=255) gATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATgg < 2:1476714/101‑1 (MQ=255) tGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCg > 2:1476902/1‑101 (MQ=255) aaaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGAt < 2:1476334/95‑1 (MQ=255) aaaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGaa > 1:1476905/1‑101 (MQ=255) aaaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAAc > 1:1476903/1‑101 (MQ=255) aaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGaaaa > 1:1476908/1‑83 (MQ=255) aaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAAc < 1:1476448/101‑1 (MQ=255) aGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGa > 1:1476909/1‑98 (MQ=255) gggTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCt < 1:1476690/101‑1 (MQ=255) gggTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccccccccc > 2:1476910/1‑66 (MQ=255) gTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGt < 1:1476699/101‑1 (MQ=255) ttAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtt > 1:1476912/1‑101 (MQ=255) aGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACggtgg > 1:1476914/1‑82 (MQ=255) aTTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTg < 1:1476353/95‑1 (MQ=255) aTTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGa > 2:1476919/1‑89 (MQ=255) aTTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccccc > 1:1476920/1‑59 (MQ=255) ttATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACg < 1:1476622/101‑1 (MQ=255) tATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGa < 1:1476561/101‑1 (MQ=255) aTCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCt < 1:1476507/91‑1 (MQ=255) aTCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAg > 1:1476923/1‑101 (MQ=255) ccccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACg > 2:1476924/1‑96 (MQ=255) ccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGaaa > 1:1476931/1‑66 (MQ=255) ccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGt > 2:1476929/1‑101 (MQ=255) ccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccccc > 2:1476934/1‑52 (MQ=255) ccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccc > 1:1476932/1‑52 (MQ=255) gACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTa > 2:1476936/1‑101 (MQ=255) cGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAAc < 2:1476668/81‑1 (MQ=255) gTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑cccccccccc > 1:1476939/1‑47 (MQ=255) ttCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCtt < 1:1476559/101‑1 (MQ=255) ttCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccccccc > 2:1476941/1‑45 (MQ=255) cccGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGc > 2:1476945/1‑91 (MQ=255) ccGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACggtg > 1:1476948/1‑62 (MQ=255) cGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑ccccccccc > 2:1476949/1‑41 (MQ=255) tGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAccc < 1:1476569/101‑1 (MQ=255) gATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTAc > 1:1476952/1‑79 (MQ=255) atatCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGttt < 1:1476512/75‑1 (MQ=255) atatCGCTTGAACATCCAGCGAAACAGG‑‑ccccccccc > 1:1476956/1‑36 (MQ=255) tatCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGtt < 1:1476656/101‑1 (MQ=255) atCGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCg < 2:1476820/64‑1 (MQ=255) tcccTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTa < 2:1476700/81‑1 (MQ=255) cGCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtt < 1:1476339/70‑1 (MQ=255) gCTTGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTccc > 2:1476959/1‑101 (MQ=255) cTTGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCtt > 1:1476960/1‑101 (MQ=255) cTTGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCtt < 1:1476536/101‑1 (MQ=255) ttGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCtt > 1:1476963/1‑101 (MQ=255) ttGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGttt < 2:1476550/67‑1 (MQ=255) ttGAACATCCAGCGAAACAGGC‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCttt > 1:1476962/1‑101 (MQ=255) tGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCttt < 2:1476610/101‑1 (MQ=255) tGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCttt < 1:1476605/101‑1 (MQ=255) tGAACATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCttt < 1:1476600/101‑1 (MQ=255) aCATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtttt < 1:1476631/65‑1 (MQ=255) aCATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTgcg > 1:1476967/1‑101 (MQ=255) cATCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTgcgc < 1:1476727/101‑1 (MQ=255) aTCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCa < 2:1476688/101‑1 (MQ=255) aTCCAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCa < 2:1476639/101‑1 (MQ=255) cAGCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGtggtgg > 1:1476969/1‑44 (MQ=37) gCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCg > 2:1476970/1‑48 (MQ=37) gCGAAACAGGCCCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGt < 1:1476549/101‑1 (MQ=255) || CCGTGCGCTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑CCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGTTTG > NC_000913/868314‑868506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |