BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,349,443	T→C	T123A (ACA→GCA)	mtgA ←	peptidoglycan glycosyltransferase MtgA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,349,443	0	T	C	100.0%	1371.0 / NA	331	T123A (ACA→GCA)	mtgA	peptidoglycan glycosyltransferase MtgA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (166/165); total (166/165)

Only 100 of 344 total aligned reads displayed.

CTTTTTGCTCCAGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGTCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAGCCCCAGTGC  >  NC_000913/3349345‑3349540

cTTTTTGCTCCAGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGctgcct                                                                                                 >  1:5662161/1‑101 (MQ=255)

  ttttGCTCCAGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGctgcctgt                                                                                               >  2:5662164/1‑101 (MQ=255)

   tttGCTCCAGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGtt                                                                                              <  2:5661798/101‑1 (MQ=255)

    ttGCTCCAGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTg                                                                                             <  2:5662049/101‑1 (MQ=255)

    ttGCTCCAGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTg                                                                                             <  2:5661707/101‑1 (MQ=255)

     tGCTCCAGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTga                                                                                            >  1:5662168/1‑101 (MQ=255)

     tGCTCCAGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTga                                                                                            <  2:5661818/101‑1 (MQ=255)

       cTCCAGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTgaga                                                                                          >  2:5662171/1‑101 (MQ=255)

         ccAGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGaaa                                                                                        >  1:5662174/1‑101 (MQ=255)

           aGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATc                                                                                      >  2:5662178/1‑101 (MQ=255)

            gACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTgaga                                                                                          <  2:5661621/96‑1 (MQ=255)

             aCCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGt                                                                                    <  1:5661768/101‑1 (MQ=255)

              ccGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGtt                                                                                   <  2:5661690/101‑1 (MQ=255)

                gTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGa                                                                                 >  1:5662183/1‑101 (MQ=255)

                gTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGa                                                                                 >  2:5662182/1‑101 (MQ=255)

                 tttCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGaa                                                                                <  2:5661921/101‑1 (MQ=255)

                 tttCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGaa                                                                                <  2:5661447/101‑1 (MQ=255)

                  ttCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAg                                                                               <  1:5661640/101‑1 (MQ=255)

                   tCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGtt                                                                                   >  2:5662188/1‑96 (MQ=255)

                    cTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCa                                                                             <  1:5661093/101‑1 (MQ=255)

                     tATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCAc                                                                            >  2:5662192/1‑101 (MQ=255)

                      aTCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCAcc                                                                           <  1:5661563/101‑1 (MQ=255)

                       tCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACcg                                                                          <  2:5661604/101‑1 (MQ=255)

                       tCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACcg                                                                          >  1:5662195/1‑101 (MQ=255)

                        ccccAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACcgc                                                                         >  2:5662199/1‑101 (MQ=255)

                         cccAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACcgcg                                                                        >  1:5662202/1‑101 (MQ=255)

                           cAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGaa                                                                      >  1:5662207/1‑101 (MQ=255)

                             gCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATa                                                                    <  1:5661801/101‑1 (MQ=255)

                              cGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATAc                                                                   <  1:5661738/101‑1 (MQ=255)

                                ttAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACgg                                                                 <  1:5661703/101‑1 (MQ=255)

                                 tAATCCGGCTTCCGGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGt                                                                <  1:5661662/101‑1 (MQ=255)

                                 tAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGaa                                                                                         <  1:5661509/76‑1 (MQ=255)

                                 tAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGt                                                                >  1:5662211/1‑101 (MQ=255)

                                  aaTCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGtt                                                               >  2:5662213/1‑101 (MQ=255)

                                  aaTCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGtt                                                               <  2:5661664/101‑1 (MQ=255)

                                    tCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGtttt                                                             >  1:5662218/1‑101 (MQ=255)

                                     ccGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTc                                                            >  2:5662219/1‑101 (MQ=255)

                                       ggCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCAt                                                          <  1:5661652/101‑1 (MQ=255)

                                        gCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGATATTTTTGGCTGCCTGTTg                                                                                             <  2:5661736/65‑1 (MQ=255)

                                         cTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTg                                                        <  1:5661394/101‑1 (MQ=255)

                                           tCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTgcg                                                      >  2:5662226/1‑101 (MQ=255)

                                           tCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTgcg                                                      >  1:5662227/1‑101 (MQ=255)

                                             cAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCt                                                    >  2:5662230/1‑101 (MQ=255)

                                             cAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCt                                                    <  1:5661988/101‑1 (MQ=255)

                                              aGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTc                                                   <  1:5661757/101‑1 (MQ=255)

                                               gCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCg                                                  >  1:5662236/1‑101 (MQ=255)

                                                  cTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTtg                                               <  1:5661960/101‑1 (MQ=255)

                                                   ttttCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTtgt                                              <  1:5661728/101‑1 (MQ=255)

                                                    tttCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTtgtg                                             >  2:5662241/1‑101 (MQ=255)

                                                     ttCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTgc                                            >  1:5662244/1‑101 (MQ=255)

                                                     ttCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTgc                                            <  1:5661781/101‑1 (MQ=255)

                                                      tCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTgcg                                           <  2:5661645/101‑1 (MQ=255)

                                                      tCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTgcg                                           >  2:5662246/1‑101 (MQ=255)

                                                        gAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGcc                                         <  2:5661566/101‑1 (MQ=255)

                                                        gAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGcc                                         >  2:5662249/1‑101 (MQ=255)

                                                         aaCCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCa                                        <  2:5661839/101‑1 (MQ=255)

                                                           cccAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAgg                                      <  1:5661676/101‑1 (MQ=255)

                                                            ccAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAggg                                     <  1:5662024/101‑1 (MQ=255)

                                                             cAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGc                                    <  1:5661840/101‑1 (MQ=255)

                                                              aGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCt                                   <  1:5661914/101‑1 (MQ=255)

                                                              aGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCt                                   >  2:5662256/1‑101 (MQ=255)

                                                                cTACGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCttt                                 >  1:5662257/1‑101 (MQ=255)

                                                                  aCGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCt                                   >  1:5662264/1‑97 (MQ=255)

                                                                  aCGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTtct                               <  2:5661779/101‑1 (MQ=255)

                                                                   cGCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTtctc                              >  2:5662265/1‑101 (MQ=255)

                                                                    gCCCATCCCATAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCa                             >  2:5662268/1‑101 (MQ=255)

                                                                     cccatcccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCaa                            <  2:5661764/101‑1 (MQ=255)

                                                                     cccatcccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCaa                            >  2:5662272/1‑101 (MQ=255)

                                                                     cccatcccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCaa                            <  2:5661872/101‑1 (MQ=255)

                                                                       catcccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTgc                                            <  1:5661829/83‑1 (MQ=255)

                                                                       catcccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATg                          <  2:5662013/101‑1 (MQ=255)

                                                                       catcccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATg                          >  2:5662277/1‑101 (MQ=255)

                                                                        atcccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATgg                         >  1:5662279/1‑101 (MQ=255)

                                                                         tcccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGa                        >  2:5662284/1‑101 (MQ=255)

                                                                          cccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGaa                       <  2:5661886/101‑1 (MQ=255)

                                                                          cccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGaa                       <  2:5661749/101‑1 (MQ=255)

                                                                           ccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAg                      <  1:5661599/101‑1 (MQ=255)

                                                                           ccatAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAg                      >  1:5662288/1‑101 (MQ=255)

                                                                            catAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATa                                                                    >  2:5662291/1‑54 (MQ=255)

                                                                            catAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGc                     <  2:5661721/101‑1 (MQ=255)

                                                                              tAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGa                   >  2:5662294/1‑101 (MQ=255)

                                                                              tAAAAAGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGa                   >  1:5662295/1‑101 (MQ=255)

                                                                               aaaaaGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGAc                  >  2:5662301/1‑101 (MQ=255)

                                                                                aaaaGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACa                 >  2:5662305/1‑101 (MQ=255)

                                                                                aaaaGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACa                 >  1:5662303/1‑101 (MQ=255)

                                                                                  aaGAGATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATc               >  2:5662311/1‑101 (MQ=255)

                                                                                   agagATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCa              <  1:5661855/101‑1 (MQ=255)

                                                                                   agagATTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCa              <  2:5661680/101‑1 (MQ=255)

                                                                                     agaTTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCaaa            >  2:5662315/1‑101 (MQ=255)

                                                                                     agaTTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCaaa            <  2:5661866/101‑1 (MQ=255)

                                                                                      gaTTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAg           >  2:5662321/1‑101 (MQ=255)

                                                                                      gaTTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAg           >  1:5662318/1‑101 (MQ=255)

                                                                                       aTTTTTGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAGc          >  1:5662323/1‑101 (MQ=255)

                                                                                         ttttGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAGccc        <  2:5662253/101‑1 (MQ=255)

                                                                                          tttGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAGcccc       >  2:5662327/1‑101 (MQ=255)

                                                                                          tttGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAGcccc       <  1:5661689/101‑1 (MQ=255)

                                                                                          tttGGCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAGcccc       <  1:5661865/101‑1 (MQ=255)

                                                                                             ggCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAGCCCCAGt    <  2:5661946/101‑1 (MQ=255)

                                                                                              gCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAGCCCCAGTg   <  1:5661899/101‑1 (MQ=255)

                                                                                              gCTGCCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAGCCCCAGTg   >  1:5662333/1‑101 (MQ=255)

CTTTTTGCTCCAGACCGTTTCTATCCCCAGCGTTAATCCGGCTTCCAGCCCTTTTCGAACCCAGCTACGCCCATCCCATAAAAAGAGATTTTTGGCTGTCTGTTGAGAAATCGTTGAAGCACCGCGAATACGGTTTTCATTGCGCTCGTTGTGCGCCAGGGCTTTCTCAATGGAAGCGACATCAAAGCCCCAGTGC  >  NC_000913/3349345‑3349540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`