BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,389,557	T→C	V13A (GTA→GCA)	aaeR →	LysR‑type transcriptional regulator AaeR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,389,557	0	T	C	100.0%	1146.5 / NA	275	V13A (GTA→GCA)	aaeR	LysR‑type transcriptional regulator AaeR
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (162/113); total (162/113)

Only 100 of 287 total aligned reads displayed.

GTAACTGTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGTAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGTTGCAG  >  NC_000913/3389459‑3389654

gTAACTGTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAagcag                                                                                                 >  1:5730928/1‑101 (MQ=255)

gTAACTGTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAagcag                                                                                                 <  1:5730498/101‑1 (MQ=255)

 tAACTGTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAagcagt                                                                                                <  1:5730249/101‑1 (MQ=255)

   aCTGTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTg                                                                                              >  1:5730932/1‑101 (MQ=255)

    cTGTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGa                                                                                             <  2:5730526/101‑1 (MQ=255)

    cTGTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGa                                                                                             >  1:5730936/1‑101 (MQ=255)

    cTGTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGa                                                                                             >  2:5730935/1‑101 (MQ=255)

    cTGTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACCACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGa                                                                                             <  1:5730639/101‑1 (MQ=255)

      gTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAAt                                                                                           >  2:5730940/1‑101 (MQ=255)

      gTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAAt                                                                                           <  1:5730527/101‑1 (MQ=255)

       ttATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAAtt                                                                                          >  2:5730944/1‑101 (MQ=255)

        tATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAAttt                                                                                         >  1:5730946/1‑101 (MQ=255)

         aTGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTg                                                                                        <  2:5730623/101‑1 (MQ=255)

         aTGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAAAGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTg                                                                                        >  2:5730949/1‑101 (MQ=255)

          tGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTgg                                                                                       <  2:5730404/101‑1 (MQ=255)

           gCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGc                                                                                      <  2:5730568/101‑1 (MQ=255)

           gCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGc                                                                                      >  2:5730954/1‑101 (MQ=255)

            cTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGct                                                                                     >  1:5730955/1‑101 (MQ=255)

             tGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGctc                                                                                    <  1:5730200/101‑1 (MQ=255)

             tGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGctc                                                                                    <  2:5730503/101‑1 (MQ=255)

               ttATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCtt                                                                                  >  2:5730960/1‑101 (MQ=255)

                tATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCttt                                                                                 >  1:5730961/1‑101 (MQ=255)

                  tCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTa                                                                               >  2:5730967/1‑101 (MQ=255)

                  tCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTa                                                                               >  1:5730965/1‑101 (MQ=255)

                  tCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTa                                                                               <  2:5730485/101‑1 (MQ=255)

                  tCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTa                                                                               <  2:5730341/101‑1 (MQ=255)

                    tataTTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTAcc                                                                             <  1:5730336/101‑1 (MQ=255)

                    tataTTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTAcc                                                                             >  1:5730971/1‑101 (MQ=255)

                    tataTTATGCGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTa                                                                               >  2:5730974/1‑99 (MQ=255)

                     atatTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTAccg                                                                            <  2:5730286/101‑1 (MQ=255)

                       attatGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTAccgcc                                                                          >  1:5730978/1‑101 (MQ=255)

                       attatGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTAccgcc                                                                          >  2:5730979/1‑101 (MQ=255)

                       attatGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTAccgcc                                                                          <  1:5730622/101‑1 (MQ=255)

                         tatGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTAccgccgc                                                                        >  2:5730986/1‑101 (MQ=255)

                         tatGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTAccgccgc                                                                        >  1:5730982/1‑101 (MQ=255)

                          atGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTAccgccgcc                                                                       >  1:5730989/1‑101 (MQ=255)

                            gtgATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACcgccgccgc                                                                     >  2:5730992/1‑101 (MQ=255)

                            gtgATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACcgccgccgc                                                                     >  1:5730994/1‑101 (MQ=255)

                              gATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCgccgccgccg                                                                   >  1:5730999/1‑100 (MQ=255)

                               aTCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAg                                                                  >  2:5731001/1‑101 (MQ=255)

                               aTCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAg                                                                  <  1:5730413/101‑1 (MQ=255)

                                tCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGa                                                                 <  2:5730651/101‑1 (MQ=255)

                                  tAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACa                                                               >  2:5731004/1‑101 (MQ=255)

                                  tAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACa                                                               >  1:5731005/1‑101 (MQ=255)

                                  tAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACa                                                               <  1:5730473/101‑1 (MQ=255)

                                   aaaTCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAg                                                              <  1:5730356/101‑1 (MQ=255)

                                    aaTCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGc                                                             >  1:5731010/1‑101 (MQ=255)

                                      tCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTa                                                           >  1:5731013/1‑101 (MQ=255)

                                       cACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTAc                                                          >  2:5731016/1‑101 (MQ=255)

                                        aCTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACa                                                         <  1:5730384/101‑1 (MQ=255)

                                         cTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCtttt                                                                                <  2:5730257/77‑1 (MQ=255)

                                         cTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAg                                                        >  1:5731020/1‑101 (MQ=255)

                                         cTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAg                                                        >  2:5731021/1‑101 (MQ=255)

                                          ttttAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGa                                                       >  1:5731027/1‑101 (MQ=255)

                                            ttAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATg                                                     >  2:5731028/1‑101 (MQ=255)

                                               aGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGc                                                  <  1:5730122/101‑1 (MQ=255)

                                                gTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCg                                                 <  1:5730401/101‑1 (MQ=255)

                                                 tCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGt                                                >  1:5731035/1‑101 (MQ=255)

                                                 tCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGt                                                >  2:5731033/1‑101 (MQ=255)

                                                  cAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTAc                                                                              <  1:5730701/70‑1 (MQ=255)

                                                  cAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGtt                                               <  1:5730591/101‑1 (MQ=255)

                                                    gagTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTc                                             <  2:5730583/101‑1 (MQ=255)

                                                     agTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCg                                            >  2:5731037/1‑101 (MQ=255)

                                                     agTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCg                                            <  1:5730678/101‑1 (MQ=255)

                                                      gTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGt                                           <  2:5730536/101‑1 (MQ=255)

                                                       tGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTc                                          >  1:5731041/1‑101 (MQ=255)

                                                         aataatGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCa                                        >  2:5731045/1‑101 (MQ=255)

                                                           taatGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCAtc                                      >  1:5731047/1‑101 (MQ=255)

                                                             atGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCAtcag                                    <  1:5730537/101‑1 (MQ=255)

                                                              tGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCAtcagt                                   <  1:5730602/101‑1 (MQ=255)

                                                              tGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCAAtcagt                                   >  2:5731050/1‑101 (MQ=255)

                                                               ggAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACGGATGAGCGTTTCGTCCAtcagtc                                  <  2:5730499/101‑1 (MQ=255)

                                                                gAACGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCAtcagtca                                 >  1:5731052/1‑101 (MQ=255)

                                                                   cGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGAc                              >  1:5731055/1‑101 (MQ=255)

                                                                   cGACTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGAc                              <  1:5730461/101‑1 (MQ=255)

                                                                     aCTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACgg                            >  1:5731057/1‑101 (MQ=255)

                                                                     aCTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACgg                            <  2:5730708/101‑1 (MQ=255)

                                                                      cTAAAACGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTAcc                                                                             >  2:5731059/1‑51 (MQ=255)

                                                                        aaaaCGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTAt                         >  1:2241765/1‑101 (MQ=255)

                                                                        aaaaCGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTAt                         >  2:5731063/1‑101 (MQ=255)

                                                                         aaaCGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATc                        >  1:5731065/1‑101 (MQ=255)

                                                                            cGCATGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCaaa                     >  1:5731070/1‑101 (MQ=255)

                                                                                tGTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTg                 <  2:5730456/101‑1 (MQ=255)

                                                                                 gTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTgg                >  2:5731073/1‑101 (MQ=255)

                                                                                 gTCGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTgg                >  1:5731074/1‑101 (MQ=255)

                                                                                   cGGTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGaa              >  1:5731078/1‑101 (MQ=255)

                                                                                    ggTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAg             <  2:5730548/101‑1 (MQ=255)

                                                                                    ggTGTTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAg             <  1:5730766/101‑1 (MQ=255)

                                                                                     gtgtTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGa            >  2:5731081/1‑101 (MQ=255)

                                                                                      tgtTTGCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGAt           <  1:5730723/101‑1 (MQ=255)

                                                                                        tttGCCAAAGCAGTTGAATTTTGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCg                                                 >  2:5731084/1‑61 (MQ=255)

                                                                                           gCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGtt      <  2:5730747/101‑1 (MQ=255)

                                                                                           gCCAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGtt      <  2:5730598/101‑1 (MQ=255)

                                                                                            ccAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGTTg     >  1:5731089/1‑101 (MQ=255)

                                                                                            ccAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGTTg     >  2:5731088/1‑101 (MQ=255)

                                                                                             cAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGTTGc    <  2:5731009/101‑1 (MQ=255)

                                                                                             cAAAGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGCCCATCAGTCAGACGGTATCAAAACTgg                >  1:5731094/1‑89 (MQ=255)

                                                                                              aaaGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGTTGCa   >  1:5731096/1‑101 (MQ=255)

                                                                                              aaaGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGTTGCa   <  1:5730649/101‑1 (MQ=255)

                                                                                              aaaGCAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGTTGCa   <  1:5730550/101‑1 (MQ=255)

GTAACTGTTATGCTGTTATCTATATTATGTGATCTAAATCACTTTTAAGTCAGAGTGAATAATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGTAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGTTGCAG  >  NC_000913/3389459‑3389654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`