BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	332,172	T→C	intergenic (+296/‑199)	yahV → / → pdeL	protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	332,172	0	T	C	100.0%	2061.7 / NA	486	intergenic (+296/‑199)	yahV/pdeL	protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (253/233); total (253/233)

Only 100 of 486 total aligned reads displayed.

GGAAATTATAAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTTTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGATGTGGGATGTTAT  >  NC_000913/332074‑332269

ggAAATTATAAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTg                                                                                                 >  2:569037/1‑101 (MQ=255)

 gAAATTATAAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTg                                                                                                 >  1:569040/1‑100 (MQ=255)

 gAAATTATAAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGa                                                                                                <  2:568196/101‑1 (MQ=255)

 gAAATTATAAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGa                                                                                                <  2:568409/101‑1 (MQ=255)

    aTTATAAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACtt                                                                                             <  1:568300/101‑1 (MQ=255)

     ttATAAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTtg                                                                                            >  1:569049/1‑101 (MQ=255)

     ttATAAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTtg                                                                                            >  2:569051/1‑101 (MQ=255)

      tataAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTtgt                                                                                           <  1:568191/101‑1 (MQ=255)

      tataAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTtgt                                                                                           <  2:568254/101‑1 (MQ=255)

        taAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGa                                                                                         >  2:569057/1‑101 (MQ=255)

          aaTATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGAtt                                                                                       <  1:568645/101‑1 (MQ=255)

          aaTATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGAtt                                                                                       <  1:568358/101‑1 (MQ=255)

            tatTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTAc                                                                                     >  2:569065/1‑101 (MQ=255)

            tatTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTAc                                                                                     <  2:568755/101‑1 (MQ=255)

            tatTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTAc                                                                                     <  2:568315/101‑1 (MQ=255)

             atTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTAcc                                                                                    <  1:568381/101‑1 (MQ=255)

             atTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTAcc                                                                                    >  1:569067/1‑101 (MQ=255)

                gAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCttt                                                                                 <  2:568683/101‑1 (MQ=255)

                gAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCttt                                                                                 >  2:569073/1‑101 (MQ=255)

                gAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCACTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCttt                                                                                 <  1:568412/101‑1 (MQ=255)

                  aaTAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCttttt                                                                               <  2:568888/101‑1 (MQ=255)

                  aaTAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCttttt                                                                               >  1:569077/1‑101 (MQ=255)

                   aTAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTa                                                                              >  1:569083/1‑101 (MQ=255)

                      gTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAgg                                                                           <  2:568508/101‑1 (MQ=255)

                       tCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGt                                                                          <  1:568687/101‑1 (MQ=255)

                       tCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGt                                                                          >  2:569091/1‑101 (MQ=255)

                        ccAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTa                                                                         >  1:569095/1‑101 (MQ=255)

                         cAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTAt                                                                        >  2:569096/1‑101 (MQ=255)

                         cAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTAt                                                                        <  2:568586/101‑1 (MQ=255)

                         cAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTAt                                                                        <  1:568596/101‑1 (MQ=255)

                           actactTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTAttt                                                                      >  2:569106/1‑101 (MQ=255)

                           actactTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTAttt                                                                      <  2:568143/101‑1 (MQ=255)

                           actactTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTAttt                                                                      >  1:569105/1‑101 (MQ=255)

                               cttcttTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCg                                                                  >  2:569111/1‑101 (MQ=255)

                                ttcttTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGt                                                                 <  2:568431/101‑1 (MQ=255)

                                 tcttTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTAt                                                                        <  1:568511/93‑1 (MQ=255)

                                 tcttTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTa                                                                <  1:568442/101‑1 (MQ=255)

                                  cttTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTaa                                                               >  2:569121/1‑101 (MQ=255)

                                  cttTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTaa                                                               <  1:568234/101‑1 (MQ=255)

                                   tttATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAAc                                                              >  1:569123/1‑101 (MQ=255)

                                    ttattaCCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACt                                                             <  1:568030/101‑1 (MQ=255)

                                     tattaCCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTg                                                            <  1:568621/101‑1 (MQ=255)

                                     tattaCCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTg                                                            >  2:569128/1‑101 (MQ=255)

                                       ttaCCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGtt                                                          >  1:569135/1‑101 (MQ=255)

                                        taCCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGttt                                                         <  2:568544/101‑1 (MQ=255)

                                        taCCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGttt                                                         <  1:568711/101‑1 (MQ=255)

                                        taCCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGttt                                                         <  1:568796/101‑1 (MQ=255)

                                         aCCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGtttt                                                        >  2:569141/1‑101 (MQ=255)

                                         aCCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGtttt                                                        >  1:569142/1‑101 (MQ=255)

                                          ccAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGttttt                                                       <  2:568454/101‑1 (MQ=255)

                                            aaaaaTGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTga                                                     <  1:568486/101‑1 (MQ=255)

                                            aaaaaTGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTga                                                     >  2:569148/1‑101 (MQ=255)

                                             aaaaTGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTgag                                                    >  1:569153/1‑101 (MQ=255)

                                              aaaTGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTgagc                                                   >  2:569160/1‑101 (MQ=255)

                                              aaaTGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTgagc                                                   >  1:569159/1‑101 (MQ=255)

                                                aTGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTgagcga                                                 >  2:569167/1‑101 (MQ=255)

                                                aTGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTgagcga                                                 <  1:568532/101‑1 (MQ=255)

                                                   aGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCa                                              <  2:568353/101‑1 (MQ=255)

                                                    gTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCAt                                             <  1:568325/101‑1 (MQ=255)

                                                     tATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATc                                            >  1:569173/1‑101 (MQ=255)

                                                      aTCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCa                                           >  2:569179/1‑101 (MQ=255)

                                                      aTCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCa                                           <  2:568656/101‑1 (MQ=255)

                                                          gAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAgg                                       >  2:569184/1‑101 (MQ=255)

                                                          gAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAgg                                       >  1:569185/1‑101 (MQ=255)

                                                           aaTTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGt                                      <  2:568783/101‑1 (MQ=255)

                                                            aTTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTa                                     <  1:568664/101‑1 (MQ=255)

                                                            aTTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTa                                     <  1:568344/101‑1 (MQ=255)

                                                            aTTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTa                                     <  1:568571/101‑1 (MQ=255)

                                                             ttttAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTg                                                                                                 <  1:568471/40‑1 (MQ=255)

                                                             ttttAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTaa                                    >  1:569192/1‑101 (MQ=255)

                                                                tAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGa                                 >  1:569199/1‑101 (MQ=255)

                                                                tAATATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGa                                 <  2:568448/101‑1 (MQ=255)

                                                                 aaTATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGAt                                <  2:568516/101‑1 (MQ=255)

                                                                 aaTATTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGAt                                >  2:569200/1‑101 (MQ=255)

                                                                   tatTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATaa                              >  1:569207/1‑101 (MQ=255)

                                                                   tatTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATaa                              >  2:569210/1‑101 (MQ=255)

                                                                    atTGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAAt                             <  2:568570/101‑1 (MQ=255)

                                                                     ttGCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAAtc                            >  1:569216/1‑101 (MQ=255)

                                                                       gCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAAtctt                          >  2:569224/1‑101 (MQ=255)

                                                                       gCATTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAAtctt                          >  1:569220/1‑101 (MQ=255)

                                                                         aTTCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAAtcttct                        >  2:569231/1‑101 (MQ=255)

                                                                          ttCTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATcttctt                       >  1:569234/1‑101 (MQ=255)

                                                                            cTTGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGa                     >  2:569240/1‑101 (MQ=255)

                                                                              tGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATa                   >  2:569247/1‑101 (MQ=255)

                                                                              tGCGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATa                   >  1:569249/1‑101 (MQ=255)

                                                                                cGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGt                 <  2:568474/101‑1 (MQ=255)

                                                                                cGTGATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGt                 >  2:569255/1‑101 (MQ=255)

                                                                                   gATTATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGAt              >  1:569258/1‑101 (MQ=255)

                                                                                     ttATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGAtgt            >  1:569265/1‑101 (MQ=255)

                                                                                     ttATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGAtgt            <  2:568814/101‑1 (MQ=255)

                                                                                      tATCTCCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGAtgtg           <  1:568731/101‑1 (MQ=255)

                                                                                        tctcCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGATGTggg         >  2:569270/1‑101 (MQ=255)

                                                                                         ctcCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGATGTGGGa        >  2:569275/1‑101 (MQ=255)

                                                                                          tcCTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGATGTGGGAt       >  1:569278/1‑101 (MQ=255)

                                                                                           ccTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGATGTGGGATg      <  1:568912/101‑1 (MQ=255)

                                                                                           ccTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGATGTGGGATg      <  1:568555/101‑1 (MQ=255)

                                                                                           ccTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGATGTGGGATg      <  2:568617/101‑1 (MQ=255)

                                                                                            cTGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAgggatgtgggatgt     <  2:568724/101‑1 (MQ=255)

                                                                                             tGAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGATGTGGGATGtt    >  2:569286/1‑101 (MQ=255)

                                                                                              gAGTCTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGATGTGGGATGTta   >  1:569290/1‑101 (MQ=255)

GGAAATTATAAATATTGAAATAGTCCAACTACTTCTTTATTACCAAAAATGAGTATCTGAATTTTAATATTGCATTCTTGCGTGATTATCTCCTGAGTTTGACTTGTGATTACCTTTTTAAGGTATTTAGCGTAACTGTTTTTGAGCGAGCATCAGAGGTAAAGATAATCTTCTTGATAGTGATGTGGGATGTTAT  >  NC_000913/332074‑332269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`