BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	746,213	A→G	K93K (AAA→AAG)	nei →	endonuclease VIII

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	746,213	0	A	G	100.0%	1355.0 / NA	324	K93K (AAA→AAG)	nei	endonuclease VIII
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (147/177); total (147/177)

Only 100 of 327 total aligned reads displayed.

AACGACTTAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAACTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTACAACGCG  >  NC_000913/746115‑746310

aaCGACTTAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCt                                                                                                 >  2:1275274/1‑101 (MQ=255)

 aCGACTTAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTg                                                                                                >  1:1275277/1‑101 (MQ=255)

  cggcTTAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGc                                                                                               >  1:1275280/4‑101 (MQ=255)

  cGACTTAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGc                                                                                               >  2:1275281/1‑101 (MQ=255)

     cTTAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCaaa                                                                                            <  2:1274705/101‑1 (MQ=255)

     cTTAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCaaa                                                                                            <  1:1274749/101‑1 (MQ=255)

      ttAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAAc                                                                                           >  2:1275290/1‑101 (MQ=255)

      ttAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAAc                                                                                           >  1:1275288/1‑101 (MQ=255)

       tAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACg                                                                                          >  1:1275295/1‑101 (MQ=255)

         aCGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGc                                                                                        >  2:1275298/1‑101 (MQ=255)

         aCGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGc                                                                                        <  1:1274859/101‑1 (MQ=255)

          cGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCt                                                                                       >  1:1275300/1‑101 (MQ=255)

          cGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCt                                                                                       <  1:1274695/101‑1 (MQ=255)

          cGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCt                                                                                       <  2:1274821/101‑1 (MQ=255)

           gCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCaaa                                                                                            <  2:1274654/95‑1 (MQ=255)

           gCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTg                                                                                      <  2:1274790/101‑1 (MQ=255)

            ctctACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGa                                                                                     <  2:1274774/101‑1 (MQ=255)

             tctACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGAc                                                                                    >  1:1275304/1‑101 (MQ=255)

             tctACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGAc                                                                                    <  1:1274614/101‑1 (MQ=255)

               tACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACaa                                                                                  <  1:1274325/101‑1 (MQ=255)

                 cAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACaaaa                                                                                <  1:1274734/101‑1 (MQ=255)

                  aGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGa                                                                                     <  2:1274889/95‑1 (MQ=255)

                  aGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAAc                                                                               >  2:1275312/1‑101 (MQ=255)

                  aGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAAc                                                                               >  1:1275313/1‑101 (MQ=255)

                   gCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAAcc                                                                              <  2:1275131/101‑1 (MQ=255)

                    ccATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCa                                                                             <  1:1274983/101‑1 (MQ=255)

                      aTAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCAtt                                                                           <  2:1274873/101‑1 (MQ=255)

                      aTAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCAtt                                                                           <  1:1274594/101‑1 (MQ=255)

                      aTAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCAtt                                                                           >  1:1275317/1‑101 (MQ=255)

                         aTCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTg                                                                        >  1:1275320/1‑101 (MQ=255)

                            aGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCtt                                                                     <  1:1275222/101‑1 (MQ=255)

                             gCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCttt                                                                    >  2:1275323/1‑101 (MQ=255)

                               tttACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTtat                                                                  >  1:1275327/1‑101 (MQ=255)

                               tttACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTtat                                                                  >  2:1275330/1‑101 (MQ=255)

                               tttACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTtat                                                                  <  1:1274898/101‑1 (MQ=255)

                                ttACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTtata                                                                 <  2:1274797/101‑1 (MQ=255)

                                 tACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAg                                                                >  1:1275335/1‑101 (MQ=255)

                                   cGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAgcg                                                              <  1:1274679/101‑1 (MQ=255)

                                   cGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAgcg                                                              <  2:1275236/101‑1 (MQ=255)

                                   cGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAgcg                                                              <  1:1274795/101‑1 (MQ=255)

                                    ggCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAgcgc                                                             >  2:1275339/1‑101 (MQ=255)

                                       gTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTc                                                          >  2:1275342/1‑101 (MQ=255)

                                       gTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTc                                                          >  1:1275343/1‑101 (MQ=255)

                                        tCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCg                                                         <  2:1274557/101‑1 (MQ=255)

                                        tCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCg                                                         <  1:1274453/101‑1 (MQ=255)

                                          tGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGa                                                       <  1:1274934/101‑1 (MQ=255)

                                           ggCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGat                                                      <  2:1274534/101‑1 (MQ=255)

                                             cgcgTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGatat                                                    <  1:1274817/101‑1 (MQ=255)

                                               cgTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTg                                                  >  1:1275349/1‑101 (MQ=255)

                                               cgTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTg                                                  >  2:1275350/1‑101 (MQ=255)

                                                 tGGTTGATACCGGCGAAGAGCGGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTgag                                                <  1:1274879/101‑1 (MQ=255)

                                                 tGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTgag                                                <  1:1274660/101‑1 (MQ=255)

                                                 tGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTgag                                                >  2:1275354/1‑101 (MQ=255)

                                                      gATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGtt                                           <  1:1274994/101‑1 (MQ=255)

                                                       aTACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTg                                          <  1:1274972/101‑1 (MQ=255)

                                                        tACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGa                                         <  2:1274805/101‑1 (MQ=255)

                                                        tACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGa                                         <  2:1274683/101‑1 (MQ=255)

                                                         aCCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGAc                                        >  1:1275359/1‑101 (MQ=255)

                                                          ccGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGAcc                                       >  2:1275361/1‑101 (MQ=255)

                                                            ggCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGAcccc                                     <  2:1274643/101‑1 (MQ=255)

                                                            ggCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGAcccc                                     <  2:1274916/101‑1 (MQ=255)

                                                             gCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCg                                    <  2:1274506/101‑1 (MQ=255)

                                                              cGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCgg                                   >  1:1275365/1‑101 (MQ=255)

                                                               gAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGa                                  >  2:1275366/1‑101 (MQ=255)

                                                                aaGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTc                                                                          <  2:1274137/60‑1 (MQ=255)

                                                                aaGAGCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGaa                                 >  1:1275372/1‑101 (MQ=255)

                                                                 agagCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGaac                                >  2:1275374/1‑101 (MQ=255)

                                                                   agCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGaacaa                              >  2:1275378/1‑101 (MQ=255)

                                                                   agCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGaacaa                              >  1:1275379/1‑101 (MQ=255)

                                                                    gCCGCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGaacaac                             <  1:1274739/101‑1 (MQ=255)

                                                                       gCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGa                          >  2:1275385/1‑101 (MQ=255)

                                                                       gCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGa                          <  1:1274957/101‑1 (MQ=255)

                                                                       gCAGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGa                          >  1:1275386/1‑101 (MQ=255)

                                                                         aGACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGAcc                        >  1:1275389/1‑101 (MQ=255)

                                                                          gACCACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCa                       <  1:1275039/101‑1 (MQ=255)

                                                                            ccACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGCCCCCGGAACAACTGACCACg                     <  2:1274753/101‑1 (MQ=255)

                                                                            ccACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACg                     <  2:1274911/101‑1 (MQ=255)

                                                                            ccACGCGAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACg                     <  2:1274840/101‑1 (MQ=255)

                                                                               cgcgAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCAt                  <  2:1274943/101‑1 (MQ=255)

                                                                                gcgAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATc                 >  1:1275396/1‑101 (MQ=255)

                                                                                gcgAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATc                 >  2:1275394/1‑101 (MQ=255)

                                                                                 cgAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATcc                >  2:1275401/1‑101 (MQ=255)

                                                                                  gAGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCTCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCg               <  2:1274961/101‑1 (MQ=255)

                                                                                   aGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGt              >  1:1275404/1‑101 (MQ=255)

                                                                                   aGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGt              >  2:1275406/1‑101 (MQ=255)

                                                                                   aGTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGt              <  1:1274558/101‑1 (MQ=255)

                                                                                    gTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGtt             <  2:1274855/101‑1 (MQ=255)

                                                                                    gTATTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGtt             <  1:1274761/101‑1 (MQ=255)

                                                                                      aTTGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGtttt           <  1:1274839/101‑1 (MQ=255)

                                                                                       ttGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGttttt          <  2:1274929/101‑1 (MQ=255)

                                                                                        tGCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTa         >  1:1275411/1‑101 (MQ=255)

                                                                                         gCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTAc        >  2:1275414/1‑101 (MQ=255)

                                                                                         gCGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTAc        <  1:1274718/101‑1 (MQ=255)

                                                                                          cGGGTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTga                                                 >  1:1275416/1‑59 (MQ=255)

                                                                                           gggTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTACaa      <  2:1274733/101‑1 (MQ=255)

                                                                                            ggTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTACAAc     <  1:1274868/101‑1 (MQ=255)

                                                                                            ggTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTACAAc     <  1:1274785/101‑1 (MQ=255)

                                                                                             gTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTACAAcg    <  2:1274831/101‑1 (MQ=255)

                                                                                             gTAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTACAAcg    >  1:1275420/1‑101 (MQ=255)

                                                                                              tAAAGCTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTACAAcgc   <  2:1274984/101‑1 (MQ=255)

AACGACTTAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAACTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTACAACGCG  >  NC_000913/746115‑746310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`