BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,089,047	A→G	F271L (TTC→CTC)	pgaB ←	poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine N‑deacetylase and beta‑1,6 glycoside hydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,089,047	0	A	G	100.0%	1251.6 / NA	300	F271L (TTC→CTC)	pgaB	poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine N‑deacetylase and beta‑1,6 glycoside hydrolase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (121/179); total (121/179)

Only 100 of 314 total aligned reads displayed.

CTGGGCAAACTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAACATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCAACCTTTGTA  >  NC_000913/1088949‑1089144

cTGGGCAAACTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCa                                                                                                 <  1:1834413/101‑1 (MQ=255)

 tGGGCAAACTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCAt                                                                                                <  1:1834337/101‑1 (MQ=255)

 tGGGCAAACTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCAt                                                                                                <  1:1834648/101‑1 (MQ=255)

  gggCAAACTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATg                                                                                               <  1:1834685/101‑1 (MQ=255)

   ggCAAACTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGt                                                                                              <  2:1834587/101‑1 (MQ=255)

   ggCAAACTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGt                                                                                              >  2:1835222/1‑101 (MQ=255)

     cAAACTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCa                                                                                            >  1:1835224/1‑101 (MQ=255)

     cAAACTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCa                                                                                            <  1:1834719/101‑1 (MQ=255)

       aaCTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATa                                                                                          >  2:1835227/1‑101 (MQ=255)

       aaCTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATa                                                                                          <  2:1834659/101‑1 (MQ=255)

         ctctTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAAc                                                                                        <  1:1834759/101‑1 (MQ=255)

           ctTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCg                                                                                      >  1:1835232/1‑101 (MQ=255)

           ctTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCg                                                                                      <  2:1834678/101‑1 (MQ=255)

           ctTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCg                                                                                      <  1:1834690/101‑1 (MQ=255)

            ttttAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGa                                                                                     >  2:1835237/1‑101 (MQ=255)

            ttttAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGa                                                                                     <  1:1834787/101‑1 (MQ=255)

             tttAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAg                                                                                    <  1:1834590/101‑1 (MQ=255)

               tAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGtt                                                                                  <  2:1834408/101‑1 (MQ=255)

               tAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGtt                                                                                  >  1:1835241/1‑101 (MQ=255)

                aaTGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGttt                                                                                 <  2:1834714/101‑1 (MQ=255)

                  tGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGttttt                                                                               <  1:1834478/101‑1 (MQ=255)

                   gAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGtttttt                                                                              >  2:1835245/1‑101 (MQ=255)

                    aGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGttttttt                                                                             >  1:1835247/1‑101 (MQ=255)

                     gggATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTa                                                                            <  2:1834530/101‑1 (MQ=255)

                     gggATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTa                                                                            <  2:1834908/101‑1 (MQ=255)

                      ggATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTaa                                                                           >  2:1835251/1‑101 (MQ=255)

                       gATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAAt                                                                          <  2:1834691/101‑1 (MQ=255)

                       gATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAAt                                                                          >  1:1835252/1‑101 (MQ=255)

                        attattGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAAtt                                                                         <  1:1834531/101‑1 (MQ=255)

                          tattGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTcc                                                                       >  2:1835258/1‑101 (MQ=255)

                          tattGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTcc                                                                       >  1:1835257/1‑101 (MQ=255)

                           attGGCGATTAATGCCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAGCCGAGTTTTTTTAATTCct                                                                      <  2:1834755/101‑1 (MQ=255)

                           attGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTaa                                                                           >  2:1835262/1‑96 (MQ=255)

                           attGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCct                                                                      <  1:1834577/101‑1 (MQ=255)

                           attGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCct                                                                      <  1:1834508/101‑1 (MQ=255)

                           attGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCct                                                                      <  1:1834606/101‑1 (MQ=255)

                            ttGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCctc                                                                     <  2:1834625/101‑1 (MQ=255)

                            ttGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCctc                                                                     <  1:1834850/101‑1 (MQ=255)

                             tGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCctct                                                                    <  1:1834774/101‑1 (MQ=255)

                              ggCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTa                                                                   >  1:1835265/1‑101 (MQ=255)

                               gCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTAt                                                                  >  2:1835267/1‑101 (MQ=255)

                                cGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATc                                                                 <  1:1834673/101‑1 (MQ=255)

                                 gATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCg                                                                <  2:1834767/101‑1 (MQ=255)

                                 gATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCg                                                                <  2:1834969/101‑1 (MQ=255)

                                  aTTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGc                                                               <  1:1835049/101‑1 (MQ=255)

                                   ttAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCt                                                              >  1:1835273/1‑101 (MQ=255)

                                     aaTACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCt                                                              <  2:1834796/99‑1 (MQ=255)

                                     aaTACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTAt                                                            >  2:1835276/1‑101 (MQ=255)

                                       tACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGc                                                          >  1:1835278/1‑101 (MQ=255)

                                        aCCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGcc                                                         >  2:1835283/1‑101 (MQ=255)

                                          ccGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCAt                                                       <  1:1834556/101‑1 (MQ=255)

                                           cgcgGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCAtt                                                      <  2:1835059/101‑1 (MQ=255)

                                           cgcgGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCAtt                                                      >  1:1835284/1‑101 (MQ=255)

                                            gcgGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCAttc                                                     <  2:1834614/101‑1 (MQ=255)

                                            gcgGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCAttc                                                     <  1:1834816/101‑1 (MQ=255)

                                            gcgGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCAttc                                                     >  1:1835287/1‑101 (MQ=255)

                                             cgGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCAttcg                                                    <  1:1834680/101‑1 (MQ=255)

                                                aatggaatCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCAttcgctt                                                 >  1:1835291/1‑101 (MQ=255)

                                                 atggaatCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCAttcgcttc                                                <  1:1834765/101‑1 (MQ=255)

                                                  tggaatCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCAttcgcttcg                                               >  1:1835294/1‑101 (MQ=255)

                                                   ggaatCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGtt                                                                                  >  1:1835297/1‑65 (MQ=255)

                                                    gaatCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGcc                                             <  1:1835211/101‑1 (MQ=255)

                                                    gaatCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGcc                                             <  2:1835014/101‑1 (MQ=255)

                                                     aatCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCa                                            <  2:1834779/101‑1 (MQ=255)

                                                      atCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCAt                                           <  1:1834863/101‑1 (MQ=255)

                                                      atCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCAt                                           <  2:1834854/101‑1 (MQ=255)

                                                      atCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCAt                                           <  1:1834830/101‑1 (MQ=255)

                                                       tCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATa                                          <  2:1834560/101‑1 (MQ=255)

                                                          aaTTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAgg                                       >  1:1835301/1‑101 (MQ=255)

                                                            ttGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGcc                                     >  2:1835304/1‑101 (MQ=255)

                                                             tGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCca                                    >  1:1835306/1‑101 (MQ=255)

                                                               cGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCcaaa                                  <  1:1834993/101‑1 (MQ=255)

                                                                gACGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCcaaac                                 >  2:1835310/1‑101 (MQ=255)

                                                                 aCGCATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCcaaaca                                <  2:1834843/101‑1 (MQ=255)

                                                                    cATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCAttcgcttcgc                                              >  1:1835314/1‑84 (MQ=255)

                                                                    cATTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACaaaa                             <  1:1834935/101‑1 (MQ=255)

                                                                     aTTTGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACaaaaa                            >  1:1835317/1‑101 (MQ=255)

                                                                       ttGCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACg                          >  2:1835318/1‑101 (MQ=255)

                                                                         gCCAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACgtg                        <  1:1834884/101‑1 (MQ=255)

                                                                          ccAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACgtgt                       <  2:1834954/101‑1 (MQ=255)

                                                                           cAAACCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGtgtg                      >  1:1835322/1‑101 (MQ=255)

                                                                            aaaCCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTgg                     <  2:1834487/101‑1 (MQ=255)

                                                                            aaaCCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTgg                     >  2:1835325/1‑101 (MQ=255)

                                                                             aaCCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGa                    >  1:1835327/1‑101 (MQ=255)

                                                                              aCCTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGAt                   >  1:1835330/1‑101 (MQ=255)

                                                                                cTGATTCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGAttt                 <  2:1834808/101‑1 (MQ=255)

                                                                                    ttCAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCt             <  1:1834703/101‑1 (MQ=255)

                                                                                      cAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCa           >  1:1835337/1‑101 (MQ=255)

                                                                                      cAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCa           <  1:1835017/101‑1 (MQ=255)

                                                                                      cAAGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCa           >  2:1835334/1‑101 (MQ=255)

                                                                                       aaGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCaa          <  1:1834838/101‑1 (MQ=255)

                                                                                        aGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCAAc         <  1:1834799/101‑1 (MQ=255)

                                                                                        aGGGTGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCAAc         >  2:1835341/1‑101 (MQ=255)

                                                                                            tGAAGAGCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCAACCttt     <  1:1834738/101‑1 (MQ=255)

                                                                                             gaagagCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCAACCTTTg    >  2:1835344/1‑101 (MQ=255)

                                                                                             gaagagCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCAACCTTTg    <  1:1834745/101‑1 (MQ=255)

                                                                                             gaagagCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCAACCTTTg    >  1:1835346/1‑101 (MQ=255)

                                                                                              aagagCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCAACCTTTGt   <  2:1834896/101‑1 (MQ=255)

                                                                                              aagagCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCAACCTTTGt   <  2:1834873/101‑1 (MQ=255)

                                                                                               agagCATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCAACCTTTGTa  <  1:1834903/101‑1 (MQ=255)

CTGGGCAAACTCTTTTAATGAGGGATTATTGGCGATTAATACCCGCGGAATGGAATCCAATTGCGACGCATTTGCCAAACCTGATTCAAGGGTGAAGAACATGTCATAACCGAGTTTTTTTAATTCCTCTATCGCTATGCCATTCGCTTCGCCATAAGGCCAAACAAAAACGTGTGGATTTACCTCAACCTTTGTA  >  NC_000913/1088949‑1089144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`