BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,340,487	A→G	E82G (GAA→GGA)	lapA →	lipopolysaccharide assembly protein A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,340,487	0	A	G	100.0%	1177.2 / NA	285	E82G (GAA→GGA)	lapA	lipopolysaccharide assembly protein A
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (133/152); total (133/152)

Only 100 of 293 total aligned reads displayed.

TGCTGCGGGGTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTG  >  NC_000913/1340389‑1340584

tgctgcGGGGTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGgaa                                                                                                 >  2:2252267/1‑101 (MQ=255)

 gctgcGGGGTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGTCGCGCGCTGAACGTAAAATAAAGCGACTGGgaaa                                                                                                >  1:2252270/1‑101 (MQ=255)

    gcGGGGTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCa                                                                                             <  2:2251663/101‑1 (MQ=255)

     cGGGGTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAg                                                                                            <  1:2251596/101‑1 (MQ=255)

      ggggTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGc                                                                                           >  2:2252273/1‑101 (MQ=255)

      ggggTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGc                                                                                           >  1:2252274/1‑101 (MQ=255)

        ggTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCtt                                                                                         >  2:2252279/1‑101 (MQ=255)

        ggTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCtt                                                                                         >  1:2252280/1‑101 (MQ=255)

         gTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCttt                                                                                        <  1:2252025/101‑1 (MQ=255)

          tttGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTc                                                                                       <  2:2251795/101‑1 (MQ=255)

           ttGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCa                                                                                      >  1:2252285/1‑101 (MQ=255)

           ttGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCa                                                                                      <  2:2251761/101‑1 (MQ=255)

            tGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCAc                                                                                     <  1:2251578/101‑1 (MQ=255)

             gCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCAcc                                                                                    >  2:2252286/1‑101 (MQ=255)

             gCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCAcc                                                                                    <  2:2251772/101‑1 (MQ=255)

               tATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCcg                                                                                  <  2:2251745/101‑1 (MQ=255)

               tATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCcg                                                                                  <  1:2251780/101‑1 (MQ=255)

               tATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCcg                                                                                  <  2:2251881/101‑1 (MQ=255)

               tATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCcg                                                                                  >  1:2252290/1‑101 (MQ=255)

                  cGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGa                                                                               >  2:2252293/1‑101 (MQ=255)

                  cGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGa                                                                               <  1:2251699/101‑1 (MQ=255)

                   ggttggttGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGAc                                                                              >  1:2252294/1‑101 (MQ=255)

                   ggttggttGATGTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAAc                                                                                               <  2:2251599/84‑1 (MQ=255)

                    gttggttgATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACt                                                                             <  2:2252157/101‑1 (MQ=255)

                     ttggttgATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTg                                                                            <  2:2251923/101‑1 (MQ=255)

                      tggttgATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGa                                                                           >  2:2252297/1‑101 (MQ=255)

                         ttgATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGt                                                                        <  2:2251842/101‑1 (MQ=255)

                         ttgATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGt                                                                        <  1:2251629/101‑1 (MQ=255)

                         ttgATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGt                                                                        >  2:2252302/1‑101 (MQ=255)

                           gATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTgg                                                                      <  2:2251735/101‑1 (MQ=255)

                           gATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTgg                                                                      >  1:2252305/1‑101 (MQ=255)

                             tttGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCt                                                                    >  2:2252306/1‑101 (MQ=255)

                              ttGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTg                                                                   <  1:2251681/101‑1 (MQ=255)

                               tgtgGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGt                                                                  >  1:2252310/1‑101 (MQ=255)

                                   gCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTg                                                              <  2:2251926/101‑1 (MQ=255)

                                   gCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTg                                                              <  1:2251871/101‑1 (MQ=255)

                                    ccTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGc                                                             <  1:2251977/101‑1 (MQ=255)

                                     cTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGcc                                                            >  1:2252314/1‑101 (MQ=255)

                                      tGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCg                                                           >  2:2252315/1‑101 (MQ=255)

                                       gTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGc                                                          <  2:2251692/101‑1 (MQ=255)

                                        ttCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCa                                                         <  1:2251618/101‑1 (MQ=255)

                                         tCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCAc                                                        >  1:2252320/1‑101 (MQ=255)

                                          cTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACt                                                       <  2:2251975/101‑1 (MQ=255)

                                           tGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTc                                                      >  2:2252321/1‑101 (MQ=255)

                                            ggCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCg                                                     >  1:2252326/1‑101 (MQ=255)

                                              cTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTc                                                   >  2:2252328/1‑101 (MQ=255)

                                               tGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCa                                                  >  1:2252330/1‑101 (MQ=255)

                                               tGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCa                                                  <  1:2251651/101‑1 (MQ=255)

                                                  gAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAgcg                                               >  1:2252334/1‑101 (MQ=255)

                                                  gAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAgcg                                               <  2:2251829/101‑1 (MQ=255)

                                                     ttCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAgcggcg                                            >  1:2252337/1‑101 (MQ=255)

                                                     ttCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAgcggcg                                            <  2:2251706/101‑1 (MQ=255)

                                                      tCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGa                                           <  2:2251853/101‑1 (MQ=255)

                                                       cGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGaa                                          <  1:2251848/101‑1 (MQ=255)

                                                        gtgtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAg                                         >  2:2252341/1‑101 (MQ=255)

                                                        gtgtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAg                                         >  1:2252343/1‑101 (MQ=255)

                                                          gtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGa                                       <  2:2252052/101‑1 (MQ=255)

                                                          gtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGa                                       <  2:2251753/101‑1 (MQ=255)

                                                          gtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGa                                       <  1:2251834/101‑1 (MQ=255)

                                                            ttCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAAt                                     <  1:2252014/101‑1 (MQ=255)

                                                             tCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATa                                    >  2:2252347/1‑101 (MQ=255)

                                                              cccTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATaa                                   >  2:2252350/1‑101 (MQ=255)

                                                                cTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACt                                 <  1:2251863/101‑1 (MQ=255)

                                                                cTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACt                                 >  1:2252352/1‑101 (MQ=255)

                                                                  ggCGCGCGCTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACttt                               <  2:2251657/101‑1 (MQ=255)

                                                                   gcgcgcgcTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTc                              >  1:2252356/1‑101 (MQ=255)

                                                                   gcgcgcgcTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTc                              <  1:2251718/101‑1 (MQ=255)

                                                                    cgcgcgcTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCt                             <  2:2251808/101‑1 (MQ=255)

                                                                      cgcgcTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTAt                           >  2:2252359/1‑101 (MQ=255)

                                                                       gcgcTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATg                          >  2:2252362/1‑101 (MQ=255)

                                                                       gcgcTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATg                          >  1:2252363/1‑101 (MQ=255)

                                                                       gcgcTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATg                          <  1:2252145/101‑1 (MQ=255)

                                                                         gcTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCTCCcgcg                                                                                <  2:2251381/45‑1 (MQ=38)

                                                                         gcTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAgcg                                               >  1:2252369/1‑78 (MQ=255)

                                                                         gcTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCt                        >  2:2252367/1‑101 (MQ=255)

                                                                         gcTGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCt                        <  2:2251867/101‑1 (MQ=255)

                                                                           tGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTgg                      >  2:2252373/1‑101 (MQ=255)

                                                                           tGAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTgg                      >  1:2252374/1‑101 (MQ=255)

                                                                            gAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGa                     <  1:2251762/101‑1 (MQ=255)

                                                                            gAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGa                     <  1:2252082/101‑1 (MQ=255)

                                                                            gAACGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGa                     >  1:2252377/1‑101 (MQ=255)

                                                                              aCGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgt                   >  1:2252381/1‑101 (MQ=255)

                                                                               cGTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgtt                  <  2:2252005/101‑1 (MQ=255)

                                                                                gTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTAt                           <  1:2251804/91‑1 (MQ=255)

                                                                                gTAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttg                 <  2:2251634/101‑1 (MQ=255)

                                                                                 tAAAATAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgt                >  2:2252385/1‑101 (MQ=255)

                                                                                  aaaaTAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgtt               >  1:2252386/1‑101 (MQ=255)

                                                                                  aaaaTAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgtt               <  2:2251939/101‑1 (MQ=255)

                                                                                     aTAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttgtt            >  1:2252390/1‑101 (MQ=255)

                                                                                      tAAAGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGttt           >  1:2252393/1‑101 (MQ=255)

                                                                                       aaaGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTc          <  2:2251891/101‑1 (MQ=255)

                                                                                        aaGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCt         <  2:2251952/101‑1 (MQ=255)

                                                                                        aaGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCt         >  2:2252396/1‑101 (MQ=255)

                                                                                        aaGCGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCt         <  1:2251936/101‑1 (MQ=255)

                                                                                           cGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCt      >  1:2252398/1‑101 (MQ=255)

                                                                                           cGACTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCt      <  2:2251904/101‑1 (MQ=255)

                                                                                             aCTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCttt    >  2:2252402/1‑101 (MQ=255)

                                                                                              cTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCtttt   <  1:2251744/101‑1 (MQ=255)

                                                                                              cTGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCtttt   <  1:2251915/101‑1 (MQ=255)

                                                                                               tGGGAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTg  <  1:2251894/101‑1 (MQ=255)

TGCTGCGGGGTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTG  >  NC_000913/1340389‑1340584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`