BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,368,978	C→A	L60M (CTG→ATG)	pspB →	phage shock protein B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,368,978	0	C	A	100.0%	1426.0 / NA	333	L60M (CTG→ATG)	pspB	phage shock protein B
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (138/195); total (138/195)

Only 100 of 335 total aligned reads displayed.

GCAATCGTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGCTGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCCACAGCAGGGC  >  NC_000913/1368880‑1369075

 cAATCGTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATgg                                                                                                <  1:2298588/101‑1 (MQ=255)

 cAATCGTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATgg                                                                                                >  1:2298657/1‑101 (MQ=255)

  aaTCGTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGa                                                                                               >  2:2298659/1‑101 (MQ=255)

  aaTCGTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGa                                                                                               <  1:2298068/101‑1 (MQ=255)

    tCGTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAAt                                                                                             <  1:2298281/101‑1 (MQ=255)

    tCGTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAAt                                                                                             >  1:2298662/1‑101 (MQ=255)

     cGTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATc                                                                                            >  2:2298665/1‑101 (MQ=255)

      gTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCt                                                                                           >  1:2298667/1‑101 (MQ=255)

      gTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCt                                                                                           <  1:2298198/101‑1 (MQ=255)

       ttCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTa                                                                                          <  1:2298433/101‑1 (MQ=255)

       ttCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTa                                                                                          <  1:2298051/101‑1 (MQ=255)

        tCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTAt                                                                                         >  1:2298672/1‑101 (MQ=255)

         cTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTAtt                                                                                        <  2:2297811/101‑1 (MQ=255)

         cTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTAtt                                                                                        >  1:2298675/1‑101 (MQ=255)

          tGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTc                                                                                       >  1:2298678/1‑101 (MQ=255)

            gTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCtt                                                                                     <  2:2298078/101‑1 (MQ=255)

              cGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGa                                                                                   >  2:2298682/1‑101 (MQ=255)

               gCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGAt                                                                                  <  2:2298194/101‑1 (MQ=255)

               gCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGAt                                                                                  >  1:2298685/1‑101 (MQ=255)

                cAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATg                                                                                 >  2:2298690/1‑101 (MQ=255)

                cAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATg                                                                                 >  1:2298692/1‑101 (MQ=255)

                 aGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGc                                                                                <  1:2298090/101‑1 (MQ=255)

                 aGTGAATTGTCGCAAAGGGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGc                                                                                >  2:2298694/1‑101 (MQ=255)

                   tGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAg                                                                              >  2:2298700/1‑101 (MQ=255)

                    gAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGa                                                                             >  1:2298701/1‑101 (MQ=255)

                     aaTTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGaa                                                                            <  1:2298509/101‑1 (MQ=255)

                       ttGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACa                                                                          <  2:2298395/101‑1 (MQ=255)

                        tGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACAt                                                                         <  2:2298236/101‑1 (MQ=255)

                          tCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATcc                                                                       <  1:2298214/101‑1 (MQ=255)

                           cGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCg                                                                      >  2:2298704/1‑101 (MQ=255)

                           cGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCg                                                                      <  2:2298582/101‑1 (MQ=255)

                            gCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGa                                                                     <  2:2297983/101‑1 (MQ=255)

                            gCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGa                                                                     <  1:2298271/101‑1 (MQ=255)

                               aaGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACt                                                                  <  2:2298120/101‑1 (MQ=255)

                               aaGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACt                                                                  <  1:2298229/101‑1 (MQ=255)

                               aaGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACt                                                                  >  2:2298710/1‑101 (MQ=255)

                                 gTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTgg                                                                >  1:2298712/1‑101 (MQ=255)

                                  tGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGa                                                               <  1:2298297/101‑1 (MQ=255)

                                  tGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGa                                                               <  1:2298011/101‑1 (MQ=255)

                                   gAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAg                                                              <  2:2298247/101‑1 (MQ=255)

                                     gcagcagcGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAggg                                                            >  1:2298717/1‑101 (MQ=255)

                                       agcagcGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGAt                                                          >  2:2298719/1‑101 (MQ=255)

                                        gcagcGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATc                                                         <  2:2298388/101‑1 (MQ=255)

                                        gcagcGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATc                                                         <  1:2298325/101‑1 (MQ=255)

                                         cagcGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCg                                                        <  1:2297760/101‑1 (MQ=255)

                                          agcGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGc                                                       >  2:2298724/1‑101 (MQ=255)

                                           gcGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCt                                                      <  1:2298106/101‑1 (MQ=255)

                                             gATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCg                                                        <  1:2298492/97‑1 (MQ=255)

                                             gATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTaa                                                    >  1:2298726/1‑101 (MQ=255)

                                              aTTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAAt                                                   >  1:2298729/1‑101 (MQ=255)

                                               ttAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCt                                                      >  1:2298732/1‑97 (MQ=255)

                                                 aGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGc                                                <  1:2298158/101‑1 (MQ=255)

                                                 aGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGc                                                >  2:2298736/1‑101 (MQ=255)

                                                  gcgcAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCg                                               <  2:2298307/101‑1 (MQ=255)

                                                  gcgcAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCg                                               <  2:2297942/101‑1 (MQ=255)

                                                  gcgcAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCg                                               <  2:2298007/101‑1 (MQ=255)

                                                   cgcAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGc                                                >  1:2298738/1‑99 (MQ=255)

                                                   cgcAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCgg                                              <  2:2298324/101‑1 (MQ=255)

                                                   cgcAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCgg                                              <  1:2298237/101‑1 (MQ=255)

                                                     cAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGc                                            >  1:2298741/1‑101 (MQ=255)

                                                     cAACTGGCTGACGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGc                                            <  1:2298025/101‑1 (MQ=255)

                                                       aCTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCAt                                          >  2:2298746/1‑101 (MQ=255)

                                                       aCTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCAt                                          <  2:2298301/101‑1 (MQ=255)

                                                        cTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCAtt                                         <  2:2298341/101‑1 (MQ=255)

                                                        cTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCAtt                                         <  1:2297930/101‑1 (MQ=255)

                                                          ggCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTaa                                       >  2:2298750/1‑101 (MQ=255)

                                                          ggCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTaa                                       <  2:2298210/101‑1 (MQ=255)

                                                          ggCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTaa                                       >  1:2298751/1‑101 (MQ=255)

                                                            cTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCgg                                              <  2:2298282/92‑1 (MQ=255)

                                                            cTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAAtc                                     <  1:2298148/101‑1 (MQ=255)

                                                                 gaAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCggg                                             >  2:2298756/1‑88 (MQ=255)

                                                                 gaAGCAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAAt                                <  2:2298224/101‑1 (MQ=255)

                                                                     cAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATaaaa                            <  2:2298152/101‑1 (MQ=255)

                                                                     cAAAACGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATaaaa                            <  1:2298250/101‑1 (MQ=255)

                                                                       aaaCGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATaaaaaa                          >  1:2298760/1‑101 (MQ=255)

                                                                         aCGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAAtt                        <  1:2297853/101‑1 (MQ=255)

                                                                          cGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAAt                         >  2:2298763/1‑99 (MQ=255)

                                                                          cGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTa                       <  2:2298464/101‑1 (MQ=255)

                                                                          cGGATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTa                       <  2:2298113/101‑1 (MQ=255)

                                                                           ggATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATa                               <  1:2298134/92‑1 (MQ=255)

                                                                           ggATGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTAt                      >  1:2298766/1‑101 (MQ=255)

                                                                             aTGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCa                                           >  2:2298770/1‑78 (MQ=255)

                                                                              tGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGc                   <  2:2298169/101‑1 (MQ=255)

                                                                              tGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGc                   <  1:2298400/101‑1 (MQ=255)

                                                                              tGCGCGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGc                   >  1:2298771/1‑101 (MQ=255)

                                                                               gcgcGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCg                  <  2:2298255/101‑1 (MQ=255)

                                                                               gcgcGAACGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGAACGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCg                  <  2:2298070/101‑1 (MQ=255)

                                                                                    aaCGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTc             <  2:2298174/101‑1 (MQ=255)

                                                                                    aaCGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTc             >  2:2298776/1‑101 (MQ=255)

                                                                                      cGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCca           <  2:2298429/101‑1 (MQ=255)

                                                                                      cGTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCca           <  1:2298351/101‑1 (MQ=255)

                                                                                       gTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATgg                    <  2:2298100/91‑1 (MQ=255)

                                                                                       gTATTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCcac          <  2:2298357/101‑1 (MQ=255)

                                                                                         aTTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCCAcag        >  1:2298781/1‑101 (MQ=255)

                                                                                         aTTCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCCAcag        >  2:2298782/1‑101 (MQ=255)

                                                                                           tCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTcc            >  2:2298787/1‑95 (MQ=255)

                                                                                           tCAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCCAcagca      <  2:2298289/101‑1 (MQ=255)

                                                                                            cAGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCCAcagcag     <  1:2298189/101‑1 (MQ=255)

                                                                                             aGGCGATGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCCACAGCAgg    >  1:2298790/1‑101 (MQ=255)

                                                                                               gcgaTGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCCACAGCAGGGc  <  1:2298262/101‑1 (MQ=255)

GCAATCGTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGCTGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCCACAGCAGGGC  >  NC_000913/1368880‑1369075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`