Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,409,269 T→C intergenic (+22/‑39) fnrS → / → ynaL small regulatory RNA FnrS/protein YnaL

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,409,2690TC100.0% 1085.6 / NA 262intergenic (+22/‑39)fnrS/ynaLsmall regulatory RNA FnrS/protein YnaL
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (121/141);  total (121/141)

Only 100 of 264 total aligned reads displayed.

TTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCTGT  >  NC_000913/1409171‑1409366
                                                                                                  |                                                                                                 
ttGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCt                                                                                                 <  2:2366650/101‑1 (MQ=255)
 tGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTa                                                                                                >  2:2366836/1‑101 (MQ=255)
  gTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTAc                                                                                               >  1:2366839/1‑101 (MQ=255)
   tCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTAcc                                                                                              >  2:2366840/1‑101 (MQ=255)
    cTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTAccc                                                                                             <  2:2366426/101‑1 (MQ=255)
      tACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCtt                                                                                           >  2:2366843/1‑101 (MQ=255)
          tCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAag                                                                                       >  1:2366847/1‑101 (MQ=255)
          tCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAag                                                                                       <  1:2366544/101‑1 (MQ=255)
           ccTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCt                                                                                                 >  2:2366849/1‑90 (MQ=255)
            cTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAagag                                                                                     <  1:2366454/101‑1 (MQ=255)
              tttttGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTc                                                                                   >  2:2366852/1‑101 (MQ=255)
               ttttGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTcc                                                                                  <  2:2366334/101‑1 (MQ=255)
               ttttGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTcc                                                                                  >  2:2366855/1‑101 (MQ=255)
                tttGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCa                                                                                 >  1:2366857/1‑101 (MQ=255)
                  tGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCAcc                                                                               >  2:2366863/1‑101 (MQ=255)
                   gAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCAccc                                                                              >  1:2366864/1‑101 (MQ=255)
                    aaTTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCa                                                                             <  2:2366506/101‑1 (MQ=255)
                     aTTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCaa                                                                            <  2:2366462/101‑1 (MQ=255)
                     aTTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCaa                                                                            >  1:2366868/1‑101 (MQ=255)
                      ttACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAAt                                                                           <  2:2366542/101‑1 (MQ=255)
                      ttACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAAt                                                                           >  2:2366869/1‑101 (MQ=255)
                       tACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATg                                                                          <  1:2366140/101‑1 (MQ=255)
                        aCTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGa                                                                         >  1:2366872/1‑101 (MQ=255)
                           gCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCa                                                                      >  1:2366877/1‑101 (MQ=255)
                           gCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCa                                                                      >  2:2366876/1‑101 (MQ=255)
                            cATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCag                                                                     <  1:2366548/101‑1 (MQ=255)
                              tAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCagag                                                                   <  2:2366591/101‑1 (MQ=255)
                               aGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGAc                                                                        >  1:2366882/1‑95 (MQ=255)
                               aGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAgg                                                                  <  2:2366611/101‑1 (MQ=255)
                                 cacaATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGa                                                                <  1:2366615/101‑1 (MQ=255)
                                 cacaATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGa                                                                <  2:2366388/101‑1 (MQ=255)
                                 cacaATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGa                                                                <  2:2366486/101‑1 (MQ=255)
                                  acaATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGaa                                                               >  2:2366886/1‑101 (MQ=255)
                                  acaATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGaa                                                               >  1:2366885/1‑101 (MQ=255)
                                  acaATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGaa                                                               >  2:2366889/1‑101 (MQ=255)
                                   caATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGaaa                                                              >  1:2366891/1‑101 (MQ=255)
                                   caATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGaaa                                                              <  2:2366525/101‑1 (MQ=255)
                                    aaTTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAat                                                             <  2:2366578/101‑1 (MQ=255)
                                      ttGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAatat                                                           <  2:2366558/101‑1 (MQ=255)
                                      ttGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAatat                                                           <  1:2366564/101‑1 (MQ=255)
                                       tGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATg                                                          <  1:2366601/101‑1 (MQ=255)
                                       tGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATg                                                          <  2:2366338/101‑1 (MQ=255)
                                        gATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATga                                                         >  2:2366894/1‑101 (MQ=255)
                                        gATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATga                                                         >  1:2366896/1‑101 (MQ=255)
                                         aTTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATgac                                                        <  2:2366300/101‑1 (MQ=255)
                                          ttCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATgacg                                                       <  1:2366503/101‑1 (MQ=255)
                                           tCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATgacga                                                      <  1:2366654/101‑1 (MQ=255)
                                             gTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATgacg                                                       <  2:2366635/98‑1 (MQ=255)
                                             gTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGaca                                                    >  1:2366900/1‑101 (MQ=255)
                                               acgacgCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACt                                                  <  2:2366262/101‑1 (MQ=255)
                                               acgacgCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACt                                                  >  1:2366903/1‑101 (MQ=255)
                                                 gacgCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACtta                                                >  2:2366904/1‑101 (MQ=255)
                                                   cgCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACttatt                                              <  2:2366439/101‑1 (MQ=255)
                                                    gCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACttattt                                             >  2:2366907/1‑101 (MQ=255)
                                                    gCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACttattt                                             <  1:2366684/101‑1 (MQ=255)
                                                    gCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACttattt                                             <  2:2366569/101‑1 (MQ=255)
                                                     ccGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACttattta                                            <  2:2366622/101‑1 (MQ=255)
                                                      cGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACttatttat                                           <  1:2366316/101‑1 (MQ=255)
                                                       gACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTtatttatt                                          <  2:2366271/101‑1 (MQ=255)
                                                        aCTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTatttattt                                         >  2:2366911/1‑101 (MQ=255)
                                                         cTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTg                                        >  1:2366913/1‑101 (MQ=255)
                                                         cTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTg                                        <  2:2366556/101‑1 (MQ=255)
                                                         cTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTg                                        <  1:2366120/101‑1 (MQ=255)
                                                         cTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGGCCACCCAATGACCAGAGGGAAatat                                                           <  2:2366550/82‑1 (MQ=255)
                                                          tttGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGc                                       >  2:2366914/1‑101 (MQ=255)
                                                            tgatgaGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCaa                                     <  2:2366346/101‑1 (MQ=255)
                                                              atgaGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAAt                                   <  1:2366396/101‑1 (MQ=255)
                                                              atgaGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAAt                                   <  2:2366712/101‑1 (MQ=255)
                                                                 aGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTcc                                <  2:2366604/101‑1 (MQ=255)
                                                                  gTCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCt                               >  2:2366919/1‑101 (MQ=255)
                                                                   tCGGCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGCGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTg                              >  1:2366920/1‑101 (MQ=255)
                                                                     ggCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTc                            <  1:2366310/101‑1 (MQ=255)
                                                                      gCTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTcc                           >  2:2366923/1‑101 (MQ=255)
                                                                       cTTTTTTTTGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGAc                                                                        <  2:2366495/55‑1 (MQ=255)
                                                                        ttttttttGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGGAAATTCCTGTCCCt                         <  1:2366782/101‑1 (MQ=255)
                                                                          ttttttGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGa                       <  2:2366468/101‑1 (MQ=255)
                                                                           tttttGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTgca                      <  1:2366518/101‑3 (MQ=255)
                                                                            ttttGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAAc                     >  1:2366927/1‑101 (MQ=255)
                                                                             tttGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAAcc                    >  1:2366929/1‑101 (MQ=255)
                                                                             tttGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAAcc                    <  1:2366471/101‑1 (MQ=255)
                                                                              ttGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCg                   <  2:2366675/101‑1 (MQ=255)
                                                                              ttGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCg                   >  2:2366932/1‑101 (MQ=255)
                                                                              ttGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCg                   <  2:2366741/101‑1 (MQ=255)
                                                                               tGCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACCCTTATTTATTTGCAAATTCCTGTCCCTGAACCGa                  >  1:2366933/1‑101 (MQ=255)
                                                                                gCCTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGAt                 <  1:2366425/101‑1 (MQ=255)
                                                                                 ccTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGAtt                <  1:2366524/101‑1 (MQ=255)
                                                                                 ccTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGAtt                >  2:2366938/1‑101 (MQ=255)
                                                                                 ccTGTTATATATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGAtt                >  1:2366937/1‑101 (MQ=255)
                                                                                  cTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTc               <  2:2366384/101‑1 (MQ=255)
                                                                                  cTGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTc               <  2:2366694/101‑1 (MQ=255)
                                                                                   tGTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTcc              <  1:2366357/101‑1 (MQ=255)
                                                                                    gTTATTTATCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCt             >  1:2366941/1‑101 (MQ=255)
                                                                                     ttatttatCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCag                                                                     >  2:2366946/1‑44 (MQ=255)
                                                                                     ttatttatCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTg            <  1:2366465/101‑1 (MQ=255)
                                                                                      tatttatCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGAAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTgg           >  1:2366947/1‑101 (MQ=255)
                                                                                       atttatCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGc          >  1:2366950/1‑101 (MQ=255)
                                                                                         ttatCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGa        >  2:2366953/1‑101 (MQ=255)
                                                                                            tCAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATcc     >  2:2366956/1‑101 (MQ=255)
                                                                                             cAGCGCCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCt    >  1:2366957/1‑101 (MQ=255)
                                                                                               gcgcCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCTGt  <  2:2366420/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
TTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTTATTTATCAGCGTCTACCCTTTAAGAGTCCACCCAATGACCAGAGGGAAATATGACGACACTTATTTATTTGCAAATTCCTGTCCCTGAACCGATTCCTGGCGATCCTGT  >  NC_000913/1409171‑1409366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑