BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,632,316	T→C	intergenic (‑31/‑574)	ydfJ ← / → ynfT	putative transporter YdfJ/Qin prophage; protein YnfT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,632,316	0	T	C	100.0%	1394.5 / NA	333	intergenic (‑31/‑574)	ydfJ/ynfT	putative transporter YdfJ/Qin prophage; protein YnfT
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (170/163); total (170/163)

Only 100 of 339 total aligned reads displayed.

GATGATTCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGTTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTATTTCTGTCCC  >  NC_000913/1632218‑1632413

gatgatTCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGctt                                                                                                 <  1:2741874/101‑1 (MQ=255)

gatgatTCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGctt                                                                                                 <  2:2742032/101‑1 (MQ=255)

gatgatTCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGctt                                                                                                 <  1:2742052/101‑1 (MQ=255)

 atgatTCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTc                                                                                                >  2:2742487/1‑101 (MQ=255)

   gatTCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCt                                                                                              <  2:2741856/101‑1 (MQ=255)

   gatTCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCt                                                                                              >  1:2742491/1‑101 (MQ=255)

   gatTCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCt                                                                                              <  1:2742224/101‑1 (MQ=255)

    atTCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCtt                                                                                             <  2:2741931/101‑1 (MQ=255)

     ttCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTg                                                                                            >  2:2742494/1‑101 (MQ=255)

     ttCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTg                                                                                            <  1:2742076/101‑1 (MQ=255)

      tCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTcc                                                                                               >  1:2742499/1‑97 (MQ=255)

      tCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTgg                                                                                           <  1:2741503/101‑1 (MQ=255)

      tCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTgg                                                                                           >  2:2742497/1‑101 (MQ=255)

       cAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGc                                                                                          >  2:2742503/1‑101 (MQ=255)

         ggAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGt                                                                                        >  2:2742507/1‑101 (MQ=255)

           aaaaaaTATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGttt                                                                                      >  2:2742514/1‑101 (MQ=255)

           aaaaaaTATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGttt                                                                                      >  1:2742513/1‑101 (MQ=255)

            aaaaaTATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGtttt                                                                                     <  2:2742130/101‑1 (MQ=255)

             aaaaTATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTc                                                                                    <  2:2741937/101‑1 (MQ=255)

             aaaaTATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTc                                                                                    >  2:2742519/1‑101 (MQ=255)

              aaaTATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCt                                                                                   >  1:2742520/1‑101 (MQ=255)

                atatTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAg                                                                                 <  1:2741938/101‑1 (MQ=255)

                 tatTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAgg                                                                                >  2:2742525/1‑101 (MQ=255)

                  atTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGt                                                                               >  1:2742527/1‑101 (MQ=255)

                     tCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGtttt                                                                            <  1:2742042/101‑1 (MQ=255)

                     tCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGtttt                                                                            <  2:2741966/101‑1 (MQ=255)

                     tCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGtttt                                                                            >  2:2742533/1‑101 (MQ=255)

                      cATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGttttt                                                                           >  1:2742539/1‑101 (MQ=255)

                      cATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGttttt                                                                           >  2:2742536/1‑101 (MQ=255)

                       aTGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGtttttt                                                                          <  1:2741951/101‑1 (MQ=255)

                        tGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTc                                                                         >  2:2742542/1‑101 (MQ=255)

                         gAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCa                                                                        >  1:2742544/1‑101 (MQ=255)

                           aaCACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGa                                                                      >  1:2742549/1‑101 (MQ=255)

                           aaCACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGa                                                                      <  2:2742072/101‑1 (MQ=255)

                           aaCACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGa                                                                      <  2:2741997/101‑1 (MQ=255)

                            acacTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGAt                                                                     <  1:2741903/101‑1 (MQ=255)

                               cTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGt                                                                  >  1:2742555/1‑101 (MQ=255)

                               cTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGt                                                                  >  2:2742554/1‑101 (MQ=255)

                                tAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGtt                                                                 <  1:2742187/101‑1 (MQ=255)

                                 aaCGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTg                                                                >  1:2742560/1‑101 (MQ=255)

                                 aaCGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTg                                                                >  2:2742561/1‑101 (MQ=255)

                                 aaCGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTg                                                                <  2:2741797/101‑1 (MQ=255)

                                   cGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTATTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGTTAGTTGCa                                                              <  1:2742018/101‑1 (MQ=255)

                                    gCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCAt                                                             >  1:2742566/1‑101 (MQ=255)

                                     cTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCAtt                                                            <  1:2741995/101‑1 (MQ=255)

                                      tGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCAttt                                                           <  2:2741883/101‑1 (MQ=255)

                                      tGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCAttt                                                           <  1:2741820/101‑1 (MQ=255)

                                      tGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCAttt                                                           <  1:2742005/101‑1 (MQ=255)

                                         gcCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCAtttttt                                                        <  2:2741639/101‑1 (MQ=255)

                                         gcCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCAtttttt                                                        <  2:2742173/101‑1 (MQ=255)

                                          ccGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCAttttttt                                                       >  2:2742570/1‑101 (MQ=255)

                                           cGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTa                                                      <  2:2742277/101‑1 (MQ=255)

                                           cGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTa                                                      <  2:2741960/101‑1 (MQ=255)

                                           cGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTa                                                      <  2:2742102/101‑1 (MQ=255)

                                             aGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTaaa                                                    >  2:2742575/1‑101 (MQ=255)

                                             aGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTaaa                                                    >  1:2742574/1‑101 (MQ=255)

                                               cGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTaaaaa                                                  <  2:2742118/101‑1 (MQ=255)

                                                gAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAg                                                 >  2:2742580/1‑101 (MQ=255)

                                                 aaTATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGc                                                <  1:2741915/101‑1 (MQ=255)

                                                 aaTATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGc                                                >  1:2742582/1‑101 (MQ=255)

                                                   tataACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTa                                                      >  1:2742587/1‑93 (MQ=255)

                                                     taACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATcc                                            >  2:2742589/1‑101 (MQ=255)

                                                      aaCTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCt                                           >  2:2742593/1‑101 (MQ=255)

                                                       aCTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTa                                          <  2:2742004/101‑1 (MQ=255)

                                                         tGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAg                                        <  1:2742087/101‑1 (MQ=255)

                                                         tGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAg                                        >  2:2742599/1‑101 (MQ=255)

                                                          ggAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGt                                       <  1:2742149/101‑1 (MQ=255)

                                                           gAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGtt                                      >  1:2742603/1‑101 (MQ=255)

                                                           gAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGtt                                      >  2:2742602/1‑101 (MQ=255)

                                                              aTCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGa                                   <  1:2742140/101‑1 (MQ=255)

                                                               tCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGAt                                  >  2:2742608/1‑101 (MQ=255)

                                                                ccATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGtt                                                                              <  1:2742294/56‑1 (MQ=255)

                                                                ccATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGAtc                                 >  1:2742610/1‑101 (MQ=255)

                                                                 cATAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGAtct                                <  1:2741979/101‑1 (MQ=255)

                                                                  aTAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGAtctc                               >  2:2742616/1‑101 (MQ=255)

                                                                  aTAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGAtctc                               <  1:2741712/101‑1 (MQ=255)

                                                                   tAATTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCa                              <  2:2742010/101‑1 (MQ=255)

                                                                    aaTTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAg                             >  1:2742617/1‑101 (MQ=255)

                                                                     aTTCACAGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAgt                            >  2:2742621/1‑101 (MQ=255)

                                                                         acaGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCt                        >  1:2742625/1‑101 (MQ=255)

                                                                          caGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTa                       <  2:2742233/101‑1 (MQ=255)

                                                                          caGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTa                       <  2:2742055/101‑1 (MQ=255)

                                                                           aGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTAt                      <  2:2742090/101‑1 (MQ=255)

                                                                           aGGTGTTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTAt                      >  1:2742630/1‑101 (MQ=255)

                                                                              tgtTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGAt                                  >  1:2742635/1‑86 (MQ=255)

                                                                              tgtTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTg                   <  2:2742185/101‑1 (MQ=255)

                                                                              tgtTTTTTCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTg                   >  2:2742633/1‑101 (MQ=255)

                                                                                  ttttCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGc               <  2:2742081/101‑1 (MQ=255)

                                                                                   tttCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTAt                      >  2:2742640/1‑93 (MQ=255)

                                                                                    ttCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCt             <  2:2742198/101‑1 (MQ=255)

                                                                                     tCCCATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTa            >  1:2742642/1‑101 (MQ=255)

                                                                                      cccATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTAt           >  2:2742644/1‑101 (MQ=255)

                                                                                       ccATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTAtt          <  2:2742167/101‑1 (MQ=255)

                                                                                        cATCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTAttt         <  1:2742156/101‑1 (MQ=255)

                                                                                         aTCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTATTTc        <  1:2742470/101‑1 (MQ=255)

                                                                                         aTCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTATTTc        >  1:2742650/1‑101 (MQ=255)

                                                                                         aTCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTATTTc        >  2:2742651/1‑101 (MQ=255)

                                                                                          tCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTATTTCt       <  1:2742115/101‑1 (MQ=255)

                                                                                          tCCTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTATTTCt       <  2:2742141/101‑1 (MQ=255)

                                                                                           ccTGTGGCTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTATTTCTg      >  2:2742655/1‑101 (MQ=255)

GATGATTCAGGAAAAAATATTTCATGAAACACTAACGCTGCGCCGAGCGAATATAACTGGAAATCCATAATTCACAGGTGTTTTTTCCCATCCTGTGGTTTCCTTGGCGTTTTCTAGGTTTTTTCAGATAGTTGCATTTTTTTAAAAAGCATCCTAAGTTCGATCTCAGTGTCTATCTGGGGCCTATTTCTGTCCC  >  NC_000913/1632218‑1632413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`