BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,922,480	T→C	S164G (AGC→GGC)	pphA ←	phosphoprotein phosphatase 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,922,480	0	T	C	100.0%	1078.8 / NA	261	S164G (AGC→GGC)	pphA	phosphoprotein phosphatase 1
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/138); total (123/138)

Only 100 of 262 total aligned reads displayed.

AATATCCACGCGATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCTCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGACTGTGT  >  NC_000913/1922382‑1922577

   atCCACGCGATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCcaca                                                                                              <  2:3218935/101‑1 (MQ=255)

   atCCACGCGATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCcaca                                                                                              >  1:3219318/1‑101 (MQ=255)

    tCCACGCGATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACaa                                                                                             <  1:3218779/101‑1 (MQ=255)

    tCCACGCGATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACaa                                                                                             >  1:3219320/1‑101 (MQ=255)

       aCGCGATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGAc                                                                                          >  1:3219326/1‑101 (MQ=255)

         gcgATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCt                                                                                        <  2:3218925/101‑1 (MQ=255)

         gcgATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCt                                                                                        <  1:3219086/101‑1 (MQ=255)

         gcgATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCt                                                                                        <  2:3219043/101‑1 (MQ=255)

          cgATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTg                                                                                       >  2:3219327/1‑101 (MQ=255)

           gATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGa                                                                                      >  2:3219330/1‑101 (MQ=255)

            aTGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGAt                                                                                     >  1:3219332/1‑101 (MQ=255)

                cGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCaa                                                                                 <  1:3218961/101‑1 (MQ=255)

                  cAACGGTGTATGACCAAACCAGAAATGATCATCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAAt                                                                               <  2:3218928/101‑1 (MQ=255)

                   aaCGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATc                                                                              <  2:3218867/101‑1 (MQ=255)

                   aaCGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATc                                                                              >  1:3219336/1‑101 (MQ=255)

                   aaCGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATc                                                                              >  2:3219337/1‑101 (MQ=255)

                      ggTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAAc                                                                           <  1:3218827/101‑1 (MQ=255)

                      ggTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAAc                                                                           <  2:3218972/101‑1 (MQ=255)

                       gtgtATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACg                                                                          <  1:3219058/101‑1 (MQ=255)

                          tATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTcc                                                                       >  2:3219341/1‑101 (MQ=255)

                           aTGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCt                                                                      <  1:3219020/101‑1 (MQ=255)

                            tGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCtt                                                                     >  1:3219342/1‑101 (MQ=255)

                              aCCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCtttt                                                                   <  2:3218984/101‑1 (MQ=255)

                               ccAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTg                                                                  <  1:3218932/101‑1 (MQ=255)

                               ccAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTg                                                                  >  2:3219346/1‑101 (MQ=255)

                                cAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGc                                                                 >  1:3219347/1‑101 (MQ=255)

                                 aaaCCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGcc                                                                >  2:3219352/1‑101 (MQ=255)

                                  aaCCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCa                                                               >  1:3219353/1‑101 (MQ=255)

                                   aCCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCAt                                                              <  2:3218895/101‑1 (MQ=255)

                                   aCCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCAt                                                              >  2:3219357/1‑101 (MQ=255)

                                    ccAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCAtt                                                             >  1:3219358/1‑101 (MQ=255)

                                    ccAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCAtt                                                             <  1:3218814/101‑1 (MQ=255)

                                      aGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCa                                                           <  2:3218953/101‑1 (MQ=255)

                                       gAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCAt                                                          <  1:3218870/101‑1 (MQ=255)

                                       gAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCAt                                                          >  2:3219362/1‑101 (MQ=255)

                                         aaTGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATaa                                                        <  2:3218880/101‑1 (MQ=255)

                                          aTGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATaaa                                                       <  2:3218848/101‑1 (MQ=255)

                                          aTGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATaaa                                                       >  1:3219364/1‑101 (MQ=255)

                                           tGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAAc                                                      <  1:3218992/101‑1 (MQ=255)

                                           tGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAAc                                                      <  2:3219059/101‑1 (MQ=255)

                                             aTCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAAcat                                                    >  2:3219368/1‑101 (MQ=255)

                                              tCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAAcatc                                                   >  1:3219369/1‑101 (MQ=255)

                                              tCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAAcatc                                                   >  2:3219371/1‑101 (MQ=255)

                                               cAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAAcatca                                                  <  2:3218729/101‑1 (MQ=255)

                                                aGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGAcc                                                                                         <  2:3218887/61‑1 (MQ=255)

                                                  cACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCt                                               <  2:3218796/101‑1 (MQ=255)

                                                    ccTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGCCCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTgg                                             >  1:3219375/1‑101 (MQ=255)

                                                    ccTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTgg                                             <  1:3218679/101‑1 (MQ=255)

                                                     cTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGa                                            >  2:3219377/1‑101 (MQ=255)

                                                      tGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGAt                                           <  1:3218889/101‑1 (MQ=255)

                                                       gTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGCCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATa                                          >  2:3219379/1‑101 (MQ=255)

                                                        tAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATaa                                         <  1:3218764/101‑1 (MQ=255)

                                                        tAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATaa                                         >  1:3219381/1‑101 (MQ=255)

                                                         aaTTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAAt                                        <  2:3218740/101‑1 (MQ=255)

                                                            tCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCgg                                     >  2:3219386/1‑101 (MQ=255)

                                                            tCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCgg                                     <  2:3219093/101‑1 (MQ=255)

                                                             cccTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGc                                    <  1:3219109/101‑1 (MQ=255)

                                                             cccTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGc                                    >  2:3219389/1‑101 (MQ=255)

                                                              ccTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCa                                   >  1:3219390/1‑101 (MQ=255)

                                                                 gCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCa                                                                                  <  2:3219011/51‑1 (MQ=255)

                                                                 gCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGa                                <  1:3218922/101‑1 (MQ=255)

                                                                 gCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGa                                >  2:3219396/1‑101 (MQ=255)

                                                                 gCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGa                                >  1:3219393/1‑101 (MQ=255)

                                                                  cccTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAg                               <  1:3218946/101‑1 (MQ=255)

                                                                   ccTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCa                                   >  2:3219400/1‑96 (MQ=255)

                                                                   ccTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGc                              <  1:3219088/101‑1 (MQ=255)

                                                                   ccTTTTTGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATAGGCATGAg                               >  1:3219399/1‑100 (MQ=255)

                                                                      ttttGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAAt                           >  1:3219405/1‑101 (MQ=255)

                                                                      ttttGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAAt                           >  2:3219406/1‑101 (MQ=255)

                                                                      ttttGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAAt                           <  2:3218908/101‑1 (MQ=255)

                                                                        ttGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATaa                         >  1:3219408/1‑101 (MQ=255)

                                                                         tGGCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAAc                        <  2:3219293/101‑1 (MQ=255)

                                                                          ggCGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACa                       >  1:3219412/1‑101 (MQ=255)

                                                                            cGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATg                     >  2:3219414/1‑101 (MQ=255)

                                                                            cGTTCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATg                     <  2:3219253/101‑1 (MQ=255)

                                                                              ttCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCt                   <  2:3218945/101‑1 (MQ=255)

                                                                               tCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCtt                  <  2:3218838/101‑1 (MQ=255)

                                                                               tCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCtt                  <  1:3219155/101‑1 (MQ=255)

                                                                               tCACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCtt                  <  1:3219189/101‑1 (MQ=255)

                                                                                cACCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTg                 <  2:3219022/101‑1 (MQ=255)

                                                                                 aCCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGc                <  1:3219037/101‑1 (MQ=255)

                                                                                 aCCTAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGc                >  1:3219417/1‑101 (MQ=255)

                                                                                    tAATCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCgg             >  1:3219419/1‑101 (MQ=255)

                                                                                     aaTCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGt            >  2:3219421/1‑101 (MQ=255)

                                                                                     aaTCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGt            <  1:3218982/101‑1 (MQ=255)

                                                                                      aTCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTg           >  2:3219423/1‑101 (MQ=255)

                                                                                      aTCGCGAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTg           <  2:3218994/101‑1 (MQ=255)

                                                                                       tcacgAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCgg                                     <  2:3218712/71‑1 (MQ=255)

                                                                                        cgcgAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCg         >  1:3219427/1‑101 (MQ=255)

                                                                                          cgAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGAc       >  1:3219432/1‑101 (MQ=255)

                                                                                          cgAGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGAc       >  2:3219430/1‑101 (MQ=255)

                                                                                           gAGCGGCCCCACTAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGACt      <  2:3219028/101‑1 (MQ=255)

                                                                                            aGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGACtg     <  2:3219123/101‑1 (MQ=255)

                                                                                            aGCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGACtg     >  2:3219434/1‑101 (MQ=255)

                                                                                             gCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGcc               >  2:3219436/1‑90 (MQ=255)

                                                                                             gCGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGACtgt    <  2:3219204/101‑1 (MQ=255)

                                                                                              cGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGACtgtg   <  1:3218909/101‑1 (MQ=255)

                                                                                              cGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGACtgtg   <  1:3219006/101‑1 (MQ=255)

                                                                                              cGGCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGACtgtg   >  2:3219439/1‑101 (MQ=255)

                                                                                               ggCCCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGACTgtgt  <  2:3219073/101‑1 (MQ=255)

AATATCCACGCGATGTCGCAACGGTGTATGACCAAACCAGAAATGATCAGCACCTGTAATTCCCTGCCCTTTTTGGCGTTCACCTAATCGCGAGCGGCTCCACAAGACCTGATGCAAATCAACGTCCTTTTGCCATTCATAAACATCATCTGGATAATCGGCATGAGCAATAACATGCTTGCCGGTGCGACTGTGT  >  NC_000913/1922382‑1922577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`