BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,364,849	T→C	V99A (GTT→GCT)	nudI →	pyrimidine deoxynucleotide diphosphatase NudI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,364,849	0	T	C	100.0%	1563.4 / NA	372	V99A (GTT→GCT)	nudI	pyrimidine deoxynucleotide diphosphatase NudI
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (187/185); total (187/185)

Only 100 of 383 total aligned reads displayed.

AATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACC  >  NC_000913/2364751‑2364946

aaTCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGctt                                                                                                 <  2:3964483/101‑1 (MQ=255)

aaTCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGctt                                                                                                 <  2:3964519/101‑1 (MQ=255)

aaTCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGctt                                                                                                 >  1:3964921/1‑101 (MQ=255)

aaTCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGctt                                                                                                 <  2:3964582/101‑1 (MQ=255)

  tCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCt                                                                                               <  1:3964173/101‑1 (MQ=255)

  tCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCt                                                                                               <  2:3964317/101‑1 (MQ=255)

   cACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTg                                                                                              <  2:3964392/101‑1 (MQ=255)

    aCGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGc                                                                                             >  1:3964926/1‑101 (MQ=255)

      gCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCa                                                                                           >  2:3964931/1‑101 (MQ=255)

        cGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAAc                                                                                         >  2:3964934/1‑101 (MQ=255)

         gTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAAcc                                                                                        <  2:3964329/101‑1 (MQ=255)

         gTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAAcc                                                                                        >  2:3964939/1‑101 (MQ=255)

         gTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAAcc                                                                                        >  1:3964936/1‑101 (MQ=255)

         gTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAAcc                                                                                        <  1:3964198/101‑1 (MQ=255)

             aCCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCgaga                                                                                    <  2:3964456/101‑1 (MQ=255)

             aCCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCgaga                                                                                    >  1:3964944/1‑101 (MQ=255)

               cTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAg                                                                                  >  2:3964946/1‑101 (MQ=255)

               cTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAg                                                                                  <  2:3964357/101‑1 (MQ=255)

                ttCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGt                                                                                 <  1:3964376/101‑1 (MQ=255)

                 tCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTg                                                                                >  2:3964951/1‑101 (MQ=255)

                  cAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGa                                                                               <  2:3964697/101‑1 (MQ=255)

                      gatgatATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAAt                                                                           <  2:3964529/101‑1 (MQ=255)

                      gatgatATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAAt                                                                           <  2:3964420/101‑1 (MQ=255)

                      gatgatATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAAt                                                                           >  2:3964957/1‑101 (MQ=255)

                       atgatATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATa                                                                          <  1:3964550/101‑1 (MQ=255)

                       atgatATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATa                                                                          >  1:3964960/1‑101 (MQ=255)

                         gatATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATaaa                                                                        <  1:3964333/101‑1 (MQ=255)

                           tatTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACg                                                                      <  2:3964252/101‑1 (MQ=255)

                           tatTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACg                                                                      >  1:3964965/1‑101 (MQ=255)

                            atTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAAc                                                                       >  2:3964969/1‑99 (MQ=255)

                              tCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAag                                                                   <  2:3964619/101‑1 (MQ=255)

                               cGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAaga                                                                  >  2:3964973/1‑101 (MQ=255)

                                gCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAagag                                                                 >  1:3964974/1‑101 (MQ=255)

                                gCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAagag                                                                 <  2:3964547/101‑1 (MQ=255)

                                  aCCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGtt                                                               >  1:3964979/1‑101 (MQ=255)

                                    cAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTc                                                             <  1:3964576/101‑1 (MQ=255)

                                     aaGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCa                                                            >  2:3964984/1‑101 (MQ=255)

                                     aaGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCa                                                            >  1:3964985/1‑101 (MQ=255)

                                     aaGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCa                                                            <  2:3964428/101‑1 (MQ=255)

                                      aGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAg                                                           <  2:3964279/101‑1 (MQ=255)

                                       gACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAgg                                                          <  1:3964288/101‑1 (MQ=255)

                                         cGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGAc                                                        >  2:3964992/1‑101 (MQ=255)

                                          gTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACt                                                       >  1:3964994/1‑101 (MQ=255)

                                          gTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACt                                                       <  1:3964637/101‑1 (MQ=255)

                                            aTGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTAc                                                     <  2:3964645/101‑1 (MQ=255)

                                              gCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTAcgc                                                   <  2:3964464/101‑1 (MQ=255)

                                               cAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTAcgcg                                                  >  2:3964999/1‑101 (MQ=255)

                                                aGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTAcgcg                                                  <  1:3964514/100‑1 (MQ=255)

                                                 gATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTg                                                <  2:3964727/101‑1 (MQ=255)

                                                  aTGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTgg                                               >  2:3965004/1‑101 (MQ=255)

                                                  aTGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTgg                                               >  1:3965005/1‑101 (MQ=255)

                                                    ggTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGt                                             <  1:3964499/101‑1 (MQ=255)

                                                    ggTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGt                                             <  2:3964166/101‑1 (MQ=255)

                                                       cGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTaaa                                          >  2:3965010/1‑101 (MQ=255)

                                                        gCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTaaaa                                         >  2:3965014/1‑101 (MQ=255)

                                                         cAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAAc                                        >  1:3965016/1‑101 (MQ=255)

                                                          aaGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAAcc                                       <  1:3964614/101‑1 (MQ=255)

                                                          aaGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAAcc                                       >  2:3965021/1‑101 (MQ=255)

                                                            ggAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTg                                     <  2:3964678/101‑1 (MQ=255)

                                                             gAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGa                                    >  1:3965027/1‑101 (MQ=255)

                                                             gAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGa                                    <  1:3964441/101‑1 (MQ=255)

                                                             gAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGa                                    <  1:3964399/101‑1 (MQ=255)

                                                             gAAGAGATTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGa                                    >  2:3965028/1‑101 (MQ=255)

                                                                 agaTTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGAt                                >  1:3965038/1‑101 (MQ=255)

                                                                 agaTTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGAt                                >  1:3965034/1‑101 (MQ=255)

                                                                  gaTTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATc                               <  2:3964509/101‑1 (MQ=255)

                                                                  gaTTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATc                               >  2:3965041/1‑101 (MQ=255)

                                                                   aTTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCt                              >  1:3965044/1‑101 (MQ=255)

                                                                   aTTTATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCt                              <  1:3964756/101‑1 (MQ=255)

                                                                    tttATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTg                             <  1:3964713/101‑1 (MQ=255)

                                                                    tttATATGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTg                             <  2:3964807/101‑1 (MQ=255)

                                                                      tataTGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGt                           <  1:3964654/101‑1 (MQ=255)

                                                                      tataTGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGt                           >  2:3965053/1‑101 (MQ=255)

                                                                      tataTGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGt                           >  1:3965050/1‑101 (MQ=255)

                                                                       atatGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAGTAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTg                          >  1:3965055/1‑101 (MQ=255)

                                                                          tGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCAt                       <  1:2368253/101‑1 (MQ=255)

                                                                          tGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCAt                       >  1:3965061/1‑101 (MQ=255)

                                                                          tGATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCAt                       >  1:3965064/1‑101 (MQ=255)

                                                                           gATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCAtt                      <  1:3964461/101‑1 (MQ=255)

                                                                           gATTTACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCAtt                      >  2:3965066/1‑101 (MQ=255)

                                                                             tttACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTAt                    <  1:3964478/101‑1 (MQ=255)

                                                                             tttACCTGATTTTTCACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTAt                    >  2:3965069/1‑101 (MQ=255)

                                                                               tACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGa                  <  1:3964625/101‑1 (MQ=255)

                                                                               tACCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGa                  >  1:3965076/1‑101 (MQ=255)

                                                                                aCCTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGAt                 >  2:3965078/1‑101 (MQ=255)

                                                                                 ccTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGAtt                <  2:3964596/101‑1 (MQ=255)

                                                                                  cTGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGAttt               >  1:3965084/1‑101 (MQ=255)

                                                                                   tGATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTg              >  2:3965085/1‑101 (MQ=255)

                                                                                    gATTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGa             <  2:3964564/101‑1 (MQ=255)

                                                                                     aTTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGaa            <  2:3964572/101‑1 (MQ=255)

                                                                                     aTTTTTGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGaa            >  1:3965090/1‑101 (MQ=255)

                                                                                      tttttGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGAttt               <  1:3964682/97‑1 (MQ=255)

                                                                                       ttttGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATg          <  2:3964659/101‑1 (MQ=255)

                                                                                       ttttGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATg          <  1:3964590/101‑1 (MQ=255)

                                                                                       ttttGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATg          >  2:3965094/1‑101 (MQ=255)

                                                                                       ttttGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATg          >  1:3965099/1‑101 (MQ=255)

                                                                                         ttGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTc        >  2:3965103/1‑101 (MQ=255)

                                                                                          tGACTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCg       >  1:3965106/1‑101 (MQ=255)

                                                                                            aCTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGcc     <  1:3964527/101‑1 (MQ=255)

                                                                                             cTGCGCTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGt                           >  1:3965110/1‑78 (MQ=255)

AATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACC  >  NC_000913/2364751‑2364946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`