BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,039,049	A→G	V232A (GTG→GCG)	xerD ←	site‑specific recombinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,039,049	0	A	G	100.0%	1406.6 / NA	336	V232A (GTG→GCG)	xerD	site‑specific recombinase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (174/162); total (174/162)

Only 100 of 355 total aligned reads displayed.

GCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCACAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAG  >  NC_000913/3038951‑3039146

 caccacGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCcagcgcag                                                                                                >  2:5116814/1‑101 (MQ=255)

    cacGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCAt                                                                                             >  2:5116818/1‑101 (MQ=255)

     acGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATa                                                                                            >  1:5116819/1‑101 (MQ=255)

      cgcgTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATa                                                                                            <  2:5116165/100‑1 (MQ=255)

         gTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGt                                                                                        <  1:5116376/101‑1 (MQ=255)

          tAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGtt                                                                                       <  1:5116157/101‑1 (MQ=255)

          tAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGtt                                                                                       >  1:5116826/1‑101 (MQ=255)

           aaaTCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGttt                                                                                      >  1:5116832/1‑101 (MQ=255)

           aaaTCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGttt                                                                                      >  2:5116834/1‑101 (MQ=255)

           aaaTCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGttt                                                                                      >  2:5116828/1‑101 (MQ=255)

           aaaTCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGttt                                                                                      <  2:5116276/101‑1 (MQ=255)

            aaTCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTa                                                                                     <  1:5116007/101‑1 (MQ=255)

             aTCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTaa                                                                                    <  1:5116031/101‑1 (MQ=255)

              tCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATa                                                                                            <  1:5116663/92‑1 (MQ=255)

               ccGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATa                                                                                  >  2:5116842/1‑101 (MQ=255)

                cGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTCCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATAc                                                                                 <  1:5116201/101‑1 (MQ=255)

                  cACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATTCCCGCCAGCGCAGCATAATGTTTAATACgg                                                                               <  1:5116221/101‑1 (MQ=255)

                   aCCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAGTACGGt                                                                              >  1:5116844/1‑101 (MQ=255)

                    ccATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTg                                                                             <  2:5116302/101‑1 (MQ=255)

                    ccATCATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATa                                                                                  >  2:5116848/1‑96 (MQ=255)

                     cATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGc                                                                            >  1:5116852/1‑101 (MQ=255)

                      aTGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGcc                                                                           <  1:5116277/101‑1 (MQ=255)

                       tGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCa                                                                          >  1:5116857/1‑101 (MQ=255)

                        gATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAg                                                                         <  1:5116351/101‑1 (MQ=255)

                        gATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAg                                                                         <  2:5116621/101‑1 (MQ=255)

                          tttAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGaa                                                                       >  1:5116861/1‑101 (MQ=255)

                           ttAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAg                                                                      >  2:5116864/1‑101 (MQ=255)

                            taataaATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAgg                                                                     <  1:5116410/101‑1 (MQ=255)

                            taataaATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAgg                                                                     >  1:5116867/1‑101 (MQ=255)

                             aataaATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTg                                                                             >  1:5116870/1‑92 (MQ=255)

                              ataaATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTc                                                                   >  1:5116875/1‑101 (MQ=255)

                               taaATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCt                                                                  <  1:5116574/101‑1 (MQ=255)

                                  aTGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTc                                                               >  1:5116878/1‑101 (MQ=255)

                                  aTGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTc                                                               >  2:5116881/1‑101 (MQ=255)

                                   tGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATCCCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTcg                                                              <  2:5116242/101‑1 (MQ=255)

                                     aGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTcgcg                                                            <  2:5116327/101‑1 (MQ=255)

                                     aGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTcgcg                                                            >  2:5116886/1‑101 (MQ=255)

                                     aGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTcgcg                                                            <  1:5116307/101‑1 (MQ=255)

                                          cAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATc                                                       >  2:5116891/1‑101 (MQ=255)

                                          cAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATc                                                       >  1:5116892/1‑101 (MQ=255)

                                            aaaGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATctg                                                     >  2:5116898/1‑101 (MQ=255)

                                            aaaGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATctg                                                     >  1:5116899/1‑101 (MQ=255)

                                             aaGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATctgc                                                    <  2:5116369/101‑1 (MQ=255)

                                             aaGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATctgc                                                    <  1:5116316/101‑1 (MQ=255)

                                              aGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATctgct                                                   >  2:5116905/1‑101 (MQ=255)

                                               gCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATctgctg                                                  >  1:5116908/1‑101 (MQ=255)

                                               gCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATctgctg                                                  >  2:5116909/1‑101 (MQ=255)

                                               gCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATctgctg                                                  <  1:5116186/101‑1 (MQ=255)

                                                   gACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCa                                              >  2:5116913/1‑101 (MQ=255)

                                                    aCGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCAc                                             >  1:5116919/1‑101 (MQ=255)

                                                     cGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTaa                                                                                    <  1:5115887/61‑1 (MQ=255)

                                                     cGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACg                                            >  2:5116920/1‑101 (MQ=255)

                                                       cAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACgct                                          >  1:5116926/1‑101 (MQ=255)

                                                       cAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACgct                                          <  2:5116450/101‑1 (MQ=255)

                                                        aaCACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGt                                                                                        <  1:5116523/54‑1 (MQ=255)

                                                        aaCACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACgctg                                         >  2:5116929/1‑101 (MQ=255)

                                                         acacATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACgctgg                                        <  1:5116391/101‑1 (MQ=255)

                                                           acaTGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATg                                                                                         >  2:5116934/1‑50 (MQ=255)

                                                           acaTGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACgctggct                                      >  1:5116933/1‑101 (MQ=255)

                                                           acaTGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACgctggct                                      <  1:5116489/101‑1 (MQ=255)

                                                             aTGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGctggctgg                                    <  2:5116195/101‑1 (MQ=255)

                                                             aTGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGctggctgg                                    >  1:5116937/1‑101 (MQ=255)

                                                               gCGGTGACAGCTTTTCGCTGTCGATACCCGCcagcgca                                                                                                 <  1:5116124/38‑1 (MQ=255)

                                                                cGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGaa                                 >  2:5116941/1‑101 (MQ=255)

                                                                  gTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAaac                               >  1:5116948/1‑101 (MQ=255)

                                                                  gTGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAaac                               <  1:5116330/101‑1 (MQ=255)

                                                                   tGACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAaaca                              >  2:5116950/1‑101 (MQ=255)

                                                                    gACAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAaacaa                             <  1:5115943/101‑1 (MQ=255)

                                                                     aCAGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAAAGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAaacaac                            <  1:5116427/101‑1 (MQ=255)

                                                                       agtttttCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAaac                               <  1:5116362/93‑1 (MQ=255)

                                                                       aGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAacac                          >  2:5116954/1‑101 (MQ=255)

                                                                       aGCTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAacac                          <  1:5116440/101‑1 (MQ=255)

                                                                         cTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTc                                                               <  2:5116408/62‑1 (MQ=255)

                                                                         cTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAaacaa                             <  2:5116390/96‑1 (MQ=255)

                                                                         cTTTTCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGt                        >  1:5116956/1‑101 (MQ=255)

                                                                          ttttCGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTc                       >  2:5116959/1‑101 (MQ=255)

                                                                              cGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATa                                                                                  <  2:5116215/38‑1 (MQ=38)

                                                                              cGCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAAtt                   <  2:5116537/101‑1 (MQ=255)

                                                                               gCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTg                  >  2:5116965/1‑101 (MQ=255)

                                                                               gCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTg                  >  1:5116966/1‑101 (MQ=255)

                                                                               gCTGTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTg                  <  1:5116460/101‑1 (MQ=255)

                                                                                  gTCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGaca               <  1:5116544/101‑1 (MQ=255)

                                                                                   ttgATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACgctggctg                                     <  2:5116121/76‑1 (MQ=255)

                                                                                   tCGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGacac              >  2:5116970/1‑101 (MQ=255)

                                                                                    cGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTc                       <  2:5116314/91‑1 (MQ=255)

                                                                                    cGATACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGacaca             >  1:5116973/1‑101 (MQ=255)

                                                                                      aTACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTcgcg                                                            <  2:5115993/52‑1 (MQ=255)

                                                                                      aTACCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACAcc           >  2:5116977/1‑101 (MQ=255)

                                                                                        aCCCGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCAt         >  2:5116982/1‑101 (MQ=255)

                                                                                         cccGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACgct                                          <  2:5116562/67‑1 (MQ=255)

                                                                                         cccGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCAtt        >  1:5116985/1‑101 (MQ=255)

                                                                                         cccGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCAtt        <  2:5116349/101‑1 (MQ=255)

                                                                                          ccGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCt                                                                  <  2:5116504/42‑1 (MQ=255)

                                                                                          ccGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTc                       <  2:5116520/85‑1 (MQ=255)

                                                                                          ccGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTc       >  2:5116987/1‑101 (MQ=255)

                                                                                           cGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACgctg                                         <  1:5116235/66‑1 (MQ=255)

                                                                                           cGCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTca      <  2:5116743/101‑1 (MQ=255)

                                                                                            gCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAAt                    <  1:5116630/86‑1 (MQ=255)

                                                                                            gCCAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTcag     >  1:5116993/1‑101 (MQ=255)

                                                                                             ccAGCGCAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTcagc    >  2:5116995/1‑101 (MQ=255)

GCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACACATGCGGTGACAGCTTTTCGCTGTCGATACCCGCCAGCACAGCATAATGTTTAATACGGTGCCAGAAGGTCTGTCGCGTCATCTGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAG  >  NC_000913/3038951‑3039146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`