| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,021,787 | (C)5→6 | coding (284/366 nt) | fliO → | flagellar biosynthesis protein FliO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,021,782 | 1 | . | C | 99.6% | 1174.3 / ‑3.3 | 278 | coding (279/366 nt) | fliO | flagellar biosynthesis protein FliO |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (144/133); total (145/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 311 total aligned reads displayed.
CTTCACTGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑C‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATGCGTCGT > NC_000913/2021682‑2021877 | cTTCACTGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACtt < 1:3687121/101‑1 (MQ=255)cTTCACTGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACtt > 1:3687569/1‑101 (MQ=255) ttCACTGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑c < 2:3687042/101‑1 (MQ=255) ttCACTGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑c > 2:3687571/1‑101 (MQ=255) tCACTGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑c‑c > 1:3687576/1‑101 (MQ=255) cACTGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGGGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑c‑cc > 2:3687577/1‑101 (MQ=255) cTGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑c‑cccc < 1:3687067/101‑1 (MQ=255) tGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑c‑ccccc < 2:3687496/101‑2 (MQ=255) gggCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑c‑ccccct < 2:3687376/101‑3 (MQ=255) gcgcgcGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑c‑cccccttc < 2:3687156/101‑5 (MQ=255) gcgcgcGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑c‑cccccttc < 1:3687097/101‑5 (MQ=255) gcgcgcGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑c‑cccccttc > 1:3687582/1‑97 (MQ=255) cgcgcgTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑c‑cccccttct < 2:3687238/101‑6 (MQ=255) gTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCAcc > 1:3687587/1‑101 (MQ=255) tGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCa > 2:3687592/1‑101 (MQ=255) tGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCa > 1:3687590/1‑101 (MQ=255) aaaGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAAc > 1:3687595/1‑101 (MQ=255) aGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACgg < 1:3687363/101‑1 (MQ=255) aGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACgg < 1:3687233/101‑1 (MQ=255) gggTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGa < 2:3687218/101‑1 (MQ=255) ggTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGaa > 1:3687599/1‑101 (MQ=255) tgtgGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAagag < 1:3687190/101‑1 (MQ=255) tggtggTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAgaga > 2:3687602/1‑100 (MQ=255) tggtCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATAcc < 1:3686897/101‑1 (MQ=255) ggtCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCg > 1:3687607/1‑101 (MQ=255) gtCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAagag > 2:3687609/1‑94 (MQ=255) cGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAg > 1:3687613/1‑101 (MQ=255) cGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAg < 2:3687138/101‑1 (MQ=255) gATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGa < 2:3686995/101‑1 (MQ=255) gATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGa > 2:3687614/1‑101 (MQ=255) gtgGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCg > 1:3687618/1‑101 (MQ=255) ggAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGAc > 1:3687621/1‑97 (MQ=255) gAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGAtt < 1:3687258/101‑1 (MQ=255) gAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGAtt < 2:3687265/101‑1 (MQ=255) gAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGAt < 1:3687152/100‑1 (MQ=255) aaGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGAttt > 2:3687623/1‑101 (MQ=255) gATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTc > 2:3687627/1‑101 (MQ=255) gCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGt > 1:3687631/1‑101 (MQ=255) gCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGt < 2:3687087/101‑1 (MQ=255) cACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTc > 2:3687634/1‑101 (MQ=255) aCGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCg > 1:3687636/1‑101 (MQ=255) aCGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCg < 1:3687128/101‑1 (MQ=255) ggCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGt < 1:3687012/101‑1 (MQ=255) gCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTc > 1:3687640/1‑101 (MQ=255) gTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGa < 2:3687200/101‑1 (MQ=255) gCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGaaa < 2:3687167/101‑1 (MQ=255) cTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGaaaa > 1:3687644/1‑101 (MQ=255) cGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAAt > 2:3687646/1‑101 (MQ=255) ggCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAAtt < 1:3686972/101‑1 (MQ=255) ggCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAAtt < 2:3687279/101‑1 (MQ=255) ggCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAAtt > 1:3687648/1‑101 (MQ=255) gCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAAttt < 1:3687183/101‑1 (MQ=255) gCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAAttt > 1:3687652/1‑101 (MQ=255) cGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTg > 2:3687655/1‑101 (MQ=255) gTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGc > 1:3687658/1‑101 (MQ=255) tACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCtt < 2:3687172/101‑1 (MQ=255) tACCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCtt > 1:3687662/1‑101 (MQ=255) aCCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTa < 1:3687336/101‑1 (MQ=255) aCCGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTa < 2:3687329/101‑1 (MQ=255) ccGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTaa < 2:3687340/101‑1 (MQ=255) cGCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAg < 2:3687310/101‑1 (MQ=255) cGCAGGTCAAATCAATCTGCTGCATAAACTT‑CACCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTa > 1:3687666/1‑99 (MQ=255) gCAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGc > 2:3687668/1‑101 (MQ=255) cAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCg > 1:3687672/1‑101 (MQ=255) cAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCg < 1:3687281/101‑1 (MQ=255) cAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCg > 2:3687673/1‑101 (MQ=255) cAGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCg < 1:3687394/101‑1 (MQ=255) aGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGt > 1:3687680/1‑101 (MQ=255) aGGTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGt > 2:3687679/1‑101 (MQ=255) ggTCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTa < 2:3687192/101‑1 (MQ=255) tCAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGc < 1:3687421/101‑1 (MQ=255) cAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGAt < 2:3687076/51‑1 (MQ=255) cAAATCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCg > 1:3687685/1‑101 (MQ=255) aaaTCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCgg < 1:3687302/101‑1 (MQ=255) aaaTCAATCTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCgg > 2:3687688/1‑101 (MQ=255) aatcaatcTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCg > 1:3687690/1‑94 (MQ=255) tcaatcTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGgag < 1:3687374/101‑1 (MQ=255) caatcTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGgaga > 1:3687697/1‑101 (MQ=255) caatcTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGgaga > 2:3687692/1‑101 (MQ=255) aatcTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGaa > 2:3687699/1‑75 (MQ=255) atcTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATc < 2:3687110/101‑1 (MQ=255) tcTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATcc > 2:3687703/1‑101 (MQ=255) tcTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATcc > 1:3687704/1‑101 (MQ=255) tcTGCTGCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCAATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATcc < 1:3687355/101‑1 (MQ=255) ctgctgCATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCt > 1:3687708/1‑101 (MQ=255) tgctgcATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTg < 2:3687250/101‑1 (MQ=255) tgctgcATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTg < 1:3687217/101‑1 (MQ=255) tgctgcATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTg > 1:3687711/1‑101 (MQ=255) ctgcATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGAt > 2:3687714/1‑101 (MQ=255) ctgcATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGAt < 1:3687225/101‑1 (MQ=255) tgcATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATg < 1:3687056/101‑1 (MQ=255) tgcATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATg > 1:3687716/1‑101 (MQ=255) cATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATGcg < 2:3687290/101‑1 (MQ=255) cATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATGcg > 1:3687720/1‑101 (MQ=255) cATAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATGcg < 2:3687418/101‑1 (MQ=255) aTAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATGcgt < 1:3687209/101‑1 (MQ=255) tAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATGcgtc < 1:3687397/101‑1 (MQ=255) tAAACTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATGcgtc < 2:3687032/101‑1 (MQ=255) aaaCTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATGcgtcg > 2:3687725/1‑101 (MQ=255) aaCTTCC‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATGcgtcgt > 1:3687728/1‑101 (MQ=255) | CTTCACTGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTT‑C‑CCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGATGCGTCGT > NC_000913/2021682‑2021877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |