| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,207,769 | 0 | T | C | 61.4% | 295.8 / inf | 324 | V90A (GTG→GCG) | ycfK | e14 prophage; protein StfP |
| Reads supporting (aligned to +/- strand): ref base T (59/66); new base C (90/109); total (149/175) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.74e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 329 total aligned reads displayed.
AGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTA > NC_000913/1207669‑1207867 | cTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCa < 2:2300299/101‑1 (MQ=255) tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCaa > 1:2301030/1‑101 (MQ=255) tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCaa < 1:2300811/101‑1 (MQ=255) ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCaaa < 2:2300510/101‑1 (MQ=255) gagaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAAc > 2:2301032/1‑101 (MQ=255) ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGctc < 2:2300399/101‑1 (MQ=255) gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGctct > 1:2301038/1‑101 (MQ=255) ggcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCtctc > 2:2301039/1‑101 (MQ=255) cggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGa < 1:2300885/101‑1 (MQ=255) cggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGa < 2:2300503/101‑1 (MQ=255) cACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGaaaa > 2:2301042/1‑101 (MQ=255) cGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGctct < 1:2300189/93‑1 (MQ=255) gACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAGCGGCTCTCGAAAACCT > 1:2301048‑M1/1‑101 (MQ=255) ccAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTG > 2:2301050‑M1/1‑101 (MQ=255) cAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGc > 1:2301053/1‑86 (MQ=255) aGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGT < 2:2300664‑M1/101‑1 (MQ=255) gTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTT < 1:2300525‑M1/101‑1 (MQ=255) ttacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTT > 2:2301058‑M1/1‑101 (MQ=255) cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG > 1:2301063‑M1/1‑101 (MQ=255) cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG < 1:2300331‑M1/101‑1 (MQ=255) cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG > 2:2301061‑M1/1‑101 (MQ=255) ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGA > 2:2301066‑M1/1‑101 (MQ=255) tacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAG < 1:2300389‑M1/101‑1 (MQ=255) ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAA > 2:2301072‑M1/1‑101 (MQ=255) cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAG > 2:2301076‑M1/1‑101 (MQ=255) cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAG > 1:2301077‑M1/1‑98 (MQ=255) gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG < 2:2300651‑M1/101‑1 (MQ=255) gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG < 2:2300687‑M1/101‑1 (MQ=255) gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG < 2:2300638‑M1/101‑1 (MQ=255) aCTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGct > 2:2301081‑M1/1‑99 (MQ=255) cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctc > 1:2301083‑M1/1‑98 (MQ=255) ttCGCGCGGTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct < 1:2300581‑M1/101‑5 (MQ=255) tCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaa < 1:2300828/101‑1 (MQ=255) tCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctg < 1:2300658‑M1/101‑6 (MQ=255) cgcgcgCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCtctc > 2:2301087/1‑72 (MQ=255) gcgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaaa < 1:2300675/101‑1 (MQ=255) cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcat < 1:2300558‑M1/101‑9 (MQ=255) gcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatt > 1:2301094‑M1/1‑92 (MQ=255) gcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACt > 2:2301093/1‑101 (MQ=255) cgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta > 1:2301100‑M1/1‑91 (MQ=255) cgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta > 2:2301099‑M1/1‑91 (MQ=255) cgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta < 2:2300858‑M1/101‑11 (MQ=255) tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacct > 1:2301104‑M1/1‑88 (MQ=255) gctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctg < 2:2300488‑M1/101‑15 (MQ=255) gctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctg > 2:2301108‑M1/1‑87 (MQ=255) gctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctg < 1:2300462‑M1/101‑15 (MQ=255) gctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATg < 2:2300711/101‑1 (MQ=255) tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca < 1:2300437/101‑1 (MQ=255) tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca < 2:2300570/101‑1 (MQ=255) tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca > 1:2301111/1‑101 (MQ=255) ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAA > 1:2301115‑M1/1‑81 (MQ=255) ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttgg < 2:2300971‑M1/101‑19 (MQ=255) aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa > 2:2301116/1‑101 (MQ=255) aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtg < 2:2300476‑M1/101‑21 (MQ=255) gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTCGGAGAAGGctctgcattacctgttggtgtc > 2:2301121‑M1/1‑79 (MQ=255) gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg > 1:2301123‑M1/1‑76 (MQ=255) gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg < 2:2300614‑M1/101‑26 (MQ=255) gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg < 1:2300748‑M1/101‑26 (MQ=255) aaGAATCCGTTTGGCGATATCAAATCGGATGGCACtgt < 2:2300379/38‑1 (MQ=255) aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggt < 1:2300529‑M1/101‑28 (MQ=255) aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggt > 1:2301127‑M1/1‑74 (MQ=255) aGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa > 2:2301128/1‑101 (MQ=255) gAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc < 2:2300604‑M1/101‑30 (MQ=255) gAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAt < 1:2300733/101‑1 (MQ=255) aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAtt < 2:2300563/101‑1 (MQ=255) aTCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccg > 2:2301133‑M1/1‑70 (MQ=255) ccGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg < 1:2300616‑M1/101‑34 (MQ=255) ccGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg < 1:2300611/101‑1 (MQ=255) ccGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg < 1:2300573‑M1/101‑34 (MQ=255) ccGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg > 1:2301135‑M1/1‑68 (MQ=255) tttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG < 2:2300631‑M1/59‑1 (MQ=255) tttGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg < 2:2300751/101‑1 (MQ=255) ttGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc < 1:2300597‑M1/100‑37 (MQ=255) ggCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttc > 1:2301139‑M1/1‑62 (MQ=255) gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc < 2:2300557/101‑1 (MQ=255) cGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCg < 1:2300684/101‑1 (MQ=255) gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc > 1:2301143‑M1/1‑59 (MQ=255) gATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc < 2:2300799‑M1/101‑43 (MQ=255) gATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc > 2:2303895‑M1/1‑59 (MQ=255) gATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc < 1:2300710‑M1/101‑43 (MQ=255) gATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc < 1:2300649‑M1/101‑43 (MQ=255) atatCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc > 2:2303947‑M1/1‑58 (MQ=255) atatCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt > 2:2301146/1‑101 (MQ=255) tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc < 2:2300537/101‑1 (MQ=255) tCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccact > 1:2303868‑M1/1‑55 (MQ=255) aaaTCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactcc < 1:2300496‑M1/101‑49 (MQ=255) gATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaac < 2:2300588‑M1/101‑55 (MQ=255) tGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacag < 2:2300433‑M1/101‑57 (MQ=255) ggCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtttgtgtcccggttccgtggccttcagccactccgccaacagg < 2:2300714‑M1/101‑58 (MQ=255) ggCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc > 2:2301151/1‑101 (MQ=255) gCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggc > 1:2303913‑M1/1‑43 (MQ=255) gCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG < 2:2300447‑M1/43‑1 (MQ=255) cACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggct > 1:2304022‑M1/1‑42 (MQ=255) aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt > 2:2301154/1‑101 (MQ=255) aCTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctg > 2:2304023‑M1/1‑41 (MQ=255) aCTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaca < 1:2300783‑M1/96‑56 (MQ=255) aCTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt < 1:2300543/101‑1 (MQ=255) cTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt < 1:2300453/101‑1 (MQ=255) tgtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggc < 1:2300738‑M1/101‑63 (MQ=255) tgtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa > 1:2301155/1‑101 (MQ=255) | AGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTA > NC_000913/1207669‑1207867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |