BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,122,522	0	T	C	60.6%	351.6 / inf	391	E428E (GAA→GAG)	glcB	malate synthase G
Reads supporting (aligned to +/- strand): ref base T (65/89); new base C (101/136); total (166/225)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 410 total aligned reads displayed.

GCATTTCATCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAACGCCACTTCCTGCGGAC  >  NC_000913/3122422‑3122622

   tttCATCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGttct                                                                                                   <  1:5755548/101‑1 (MQ=255)

    ttCATCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGctctt                                                                                                  >  1:5756212/1‑101 (MQ=255)

     tCATCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGctcttc                                                                                                 <  2:5755670/101‑1 (MQ=255)

     tCATCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGctcttc                                                                                                 <  2:5755599/101‑1 (MQ=255)

     tCATCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGctcttc                                                                                                 >  2:5756215/1‑101 (MQ=255)

     tCATCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGctcttc                                                                                                 <  1:5755523/101‑1 (MQ=255)

      cATCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCa                                                                                                <  2:5755411/101‑1 (MQ=255)

      cATCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCa                                                                                                >  1:5756218/1‑101 (MQ=255)

       aTCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCAt                                                                                               <  1:5755858/101‑1 (MQ=255)

       aTCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCAt                                                                                               <  1:5755444/101‑1 (MQ=255)

       aTCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCAt                                                                                               <  2:5755741/101‑1 (MQ=255)

          gCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCa                                                                                            >  2:5756224/1‑101 (MQ=255)

           ccGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCAt                                                                                           >  2:5756229/1‑101 (MQ=255)

             ggTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCACaa                                                                                         <  1:5755137/101‑1 (MQ=255)

              gTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAAt                                                                                        <  2:5755343/101‑1 (MQ=255)

                aCGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGc                                                                                      >  1:5756236/1‑101 (MQ=255)

                  ggTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGccc                                                                                    <  1:5755457/101‑1 (MQ=255)

                  ggTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGccc                                                                                    >  2:5756240/1‑101 (MQ=255)

                  ggTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGccc                                                                                    >  1:5756242/1‑101 (MQ=255)

                    tCGAGGAAACCTGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCAt                                                                                  <  2:5755676/101‑1 (MQ=255)

                     cGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGctc                                                                                                    >  1:5756246/1‑82 (MQ=255)

                      gAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCAttt                                                                                <  2:5755547/101‑1 (MQ=255)

                      gAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGCTCCGACGCTCTTCATCCATAATGCCCAttt                                                                                >  1:5756252/1‑101 (MQ=255)

                       aGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATg                                                                                       <  2:5755490/93‑1 (MQ=255)

                        ggAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTc                                                                              >  1:5756257/1‑101 (MQ=255)

                        ggAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTc                                                                              <  1:5755414/101‑1 (MQ=255)

                         gAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCa                                                                             <  1:5755836/101‑1 (MQ=255)

                         gAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCa                                                                             >  2:5756259/1‑101 (MQ=255)

                          aaaCCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAg                                                                            <  2:5755872/101‑1 (MQ=255)

                           aaCCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAgg                                                                           >  1:5756264/1‑101 (MQ=255)

                            aCCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAggg                                                                          <  2:5755477/101‑1 (MQ=255)

                            aCCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAggg                                                                          <  1:5755564/101‑1 (MQ=255)

                             ccGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGt                                                                         >  1:5756268/1‑101 (MQ=255)

                               ggTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTAt                                                                       <  1:5755511/101‑1 (MQ=255)

                               ggTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTAt                                                                       <  2:5755427/101‑1 (MQ=255)

                                gTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTAtt                                                                      >  1:5756273/1‑101 (MQ=255)

                                gTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTAtt                                                                      <  2:5755513/101‑1 (MQ=255)

                                 tATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTc                                                                     <  1:5755618/101‑1 (MQ=255)

                                 tATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTc                                                                     <  2:5755794/101‑1 (MQ=255)

                                 tATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTc                                                                     >  2:5756274/1‑101 (MQ=255)

                                  aTTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCg                                                                    <  2:5755155/101‑1 (MQ=255)

                                  aTTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCg                                                                    <  1:5755786/101‑1 (MQ=255)

                                     gatgaACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTg                                                                 <  1:5755500/101‑1 (MQ=255)

                                     gatgaACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTg                                                                 >  1:5756281/1‑101 (MQ=255)

                                       tgaACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGcc                                                               >  2:5756283/1‑101 (MQ=255)

                                          aCGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATa                                                            <  2:5755558/101‑1 (MQ=255)

                                          aCGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATa                                                            <  2:5755627/101‑1 (MQ=255)

                                           cGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATAc                                                           >  2:5756291/1‑101 (MQ=255)

                                            gCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATAcc                                                          <  2:5755839/101‑1 (MQ=255)

                                              cACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGa                                                        <  1:5755711/101‑1 (MQ=255)

                                              cACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGa                                                        <  1:5755341/101‑1 (MQ=255)

                                              cACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCTGGGTATTCGGTGCCATACCGa                                                        >  1:5756295/1‑101 (MQ=255)

                                              cACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGa                                                        <  1:5755693/101‑1 (MQ=255)

                                               aCGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAg                                                       >  2:5756299/1‑101 (MQ=255)

                                                  cgGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCGTTTTCAGGGTATTCGGTGCCATACCGAGCAt                                                    >  2:5756304/1‑101 (MQ=255)

                                                   ggTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCAtt                                                   >  1:5756305/1‑101 (MQ=255)

                                                    gTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTg                                                  >  2:5756311/1‑101 (MQ=255)

                                                    gTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTg                                                  <  1:5755589/101‑1 (MQ=255)

                                                    gTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTg                                                  >  1:5756313/1‑101 (MQ=255)

                                                    gTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTg                                                  <  2:5755580/101‑1 (MQ=255)

                                                        cgcgcCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGtctc                                              <  2:5755656/101‑1 (MQ=255)

                                                           gcCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAAt                                           >  1:5756320/1‑101 (MQ=255)

                                                           gcCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAAt                                           <  2:5755776/101‑1 (MQ=255)

                                                            ccTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATg                                          <  2:5755726/101‑1 (MQ=255)

                                                             cTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGc                                         <  1:5755608/101‑1 (MQ=255)

                                                             cTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGc                                         <  1:5756046/101‑1 (MQ=255)

                                                             cTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGc                                         >  1:5756324/1‑101 (MQ=255)

                                                             cTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGc                                         >  2:5756325/1‑101 (MQ=255)

                                                               gAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCgg                                       >  2:5756330/1‑101 (MQ=255)

                                                               gAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATCCGGTGCCATACCGAGCATTGTCTCAATGCgg                                       <  1:5755959/101‑1 (MQ=255)

                                                                  cGATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTa                                    <  1:5755905/101‑1 (MQ=255)

                                                                   gATACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTaa                                   >  1:5756336/1‑101 (MQ=255)

                                                                    aTACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTaaa                                  <  1:5755370/101‑1 (MQ=255)

                                                                    aTACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATTCCGAGCATTGTCTCAATGCGGGTaaa                                  <  2:5755610/101‑1 (MQ=255)

                                                                    aTACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTaaa                                  >  1:5756341/1‑101 (MQ=255)

                                                                    aTACAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTaaa                                  >  2:5756339/1‑101 (MQ=255)

                                                                       cAGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAg                               >  2:5756347/1‑101 (MQ=255)

                                                                        aGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGc                                                                <  1:5755722/67‑1 (MQ=255)

                                                                        aGCTACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGt                              >  1:5756349/1‑101 (MQ=255)

                                                                           tACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGt                              <  1:5755646/98‑1 (MQ=255)

                                                                           tACGCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGGATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTttg                           >  2:5756356/1‑101 (MQ=255)

                                                                            aCGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTttgt                          >  1:5756357/1‑101 (MQ=255)

                                                                              gCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTttgttg                        <  2:5755385/101‑1 (MQ=255)

                                                                              gCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTttgttg                        <  1:5755657/101‑1 (MQ=255)

                                                                              gCAAGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTttgttg                        <  1:5755771/101‑1 (MQ=255)

                                                                                aaGTTCAGCGAGGTCCGACGCTCTTCATCAATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGc                      >  1:5756364/1‑101 (MQ=255)

                                                                                 aGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCg                     >  2:5756365/1‑101 (MQ=255)

                                                                                 aGTTCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCg                     <  2:5755572/101‑1 (MQ=255)

                                                                                    tCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAgg                                                                           <  2:5755538/44‑1 (MQ=255)

                                                                                    tCAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAAc                  <  1:5756229/101‑1 (MQ=255)

                                                                                     cAGCGAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAACg                 <  2:5756161/101‑1 (MQ=255)

                                                                                       gctaGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGt                              <  1:5755266/83‑1 (MQ=255)

                                                                                         gAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAACGCCAc             >  1:5756374/1‑101 (MQ=255)

                                                                                         gAGGTCCGACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAACGCCAc             >  2:5756373/1‑101 (MQ=255)

                                                                                            gTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAACGCCACTTc          <  2:5755973/101‑1 (MQ=255)

                                                                                            gTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAACGCCACTTc          <  1:5755745/101‑1 (MQ=255)

                                                                                             tCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAACGCCACTTcc         >  1:5756380/1‑101 (MQ=255)

                                                                                                gACGCTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAACGCCACTTCCTGc      <  2:5755275/101‑1 (MQ=255)

                                                                                                 aCGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAACGCCACTTCCTGCg     <  2:5755694/101‑1 (MQ=255)

                                                                                                 aCGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAACGCCACTTCCTGCg     >  1:5756385/1‑101 (MQ=255)

GCATTTCATCGCCGGTACGGTCGAGGAAACCGGTATTGATGAACGCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAACGCCACTTCCTGCGGAC  >  NC_000913/3122422‑3122622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`