BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	962,281	T→A	I96N (ATC→AAC)	rpsA →	30S ribosomal subunit protein S1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	962,281	0	T	A	100.0%	1325.9 / NA	310	I96N (ATC→AAC)	rpsA	30S ribosomal subunit protein S1
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (142/168); total (142/168)

Only 100 of 313 total aligned reads displayed.

GGTAGGTGACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGATCACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTGAACGGTATTCGT  >  NC_000913/962183‑962378

ggtaggtGACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACa                                                                                                 <  1:1870762/101‑1 (MQ=255)

 gtaggtGACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAacac                                                                                                <  1:1870392/101‑1 (MQ=255)

  taggtGACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACg                                                                                               <  1:1870650/101‑1 (MQ=255)

  taggtGACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACg                                                                                               <  1:1870675/101‑1 (MQ=255)

   aggtGACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGc                                                                                              <  1:1871098/101‑1 (MQ=255)

   aggtGACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGc                                                                                              >  1:1871289/1‑101 (MQ=255)

       gACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGa                                                                                          <  1:1870749/101‑1 (MQ=255)

       gACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGa                                                                                          >  2:1871292/1‑101 (MQ=255)

        aCGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGaa                                                                                         <  1:1870725/101‑1 (MQ=255)

        aCGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGaa                                                                                         <  1:1871132/101‑1 (MQ=255)

        aCGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGaa                                                                                         >  1:1871293/1‑101 (MQ=255)

          gAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGaaaa                                                                                       >  1:1871296/1‑101 (MQ=255)

            aGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAg                                                                                     <  1:1870888/101‑1 (MQ=255)

             gTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGaaaaa                                                                                      >  2:1871302/1‑99 (MQ=255)

               tGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCtt                                                                                  <  2:1870902/101‑1 (MQ=255)

                gACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTa                                                                                 >  2:1871306/1‑101 (MQ=255)

                gACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTa                                                                                 <  2:1870747/101‑1 (MQ=255)

                 aCGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTAc                                                                                <  1:1870629/101‑1 (MQ=255)

                 aCGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTAc                                                                                <  1:1870839/101‑1 (MQ=255)

                 aCGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTAc                                                                                >  1:1871307/1‑101 (MQ=255)

                  cGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACg                                                                               <  2:1870965/101‑1 (MQ=255)

                  cGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACg                                                                               >  1:1871312/1‑101 (MQ=255)

                  cGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACg                                                                               >  2:1871313/1‑101 (MQ=255)

                    ttGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGaa                                                                             <  1:1870772/101‑1 (MQ=255)

                    ttGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGaa                                                                             >  1:1871317/1‑101 (MQ=255)

                     tGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAg                                                                            <  2:1871051/101‑1 (MQ=255)

                     tGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAg                                                                            <  2:1870911/101‑1 (MQ=255)

                     tGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAg                                                                            <  1:1870865/101‑1 (MQ=255)

                      gCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGa                                                                           >  2:1871321/1‑101 (MQ=255)

                       ctctGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGAt                                                                          <  1:1871070/101‑1 (MQ=255)

                       ctctGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGAt                                                                          <  1:1870790/101‑1 (MQ=255)

                       ctctGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGAt                                                                          <  2:1870935/101‑1 (MQ=255)

                        tctGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATg                                                                         <  2:1870870/101‑1 (MQ=255)

                         ctGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGc                                                                        <  1:1871019/101‑1 (MQ=255)

                           ggACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTg                                                                      <  2:1870702/101‑1 (MQ=255)

                              cGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGaaa                                                                   >  2:1871324/1‑101 (MQ=255)

                               gCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGaa                                                                    <  1:1870782/99‑1 (MQ=255)

                                cAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACt                                                                 <  2:1870820/101‑1 (MQ=255)

                                  gTAGAAGACGGCTTCGGTGAAACTCTGTTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGt                                                               <  1:1870802/101‑1 (MQ=255)

                                  gTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGt                                                               >  1:1871327/1‑101 (MQ=255)

                                   tAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGtt                                                              >  2:1871328/1‑101 (MQ=255)

                                      aagaCGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTAcc                                                           <  1:1870858/101‑1 (MQ=255)

                                       agaCGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCg                                                          <  1:1870834/101‑1 (MQ=255)

                                        gaCGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTAc                                                            <  2:1870611/98‑1 (MQ=255)

                                         aCGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGgt                                                        <  2:1870994/101‑1 (MQ=255)

                                         aCGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGgt                                                        >  2:1871332/1‑101 (MQ=255)

                                         aCGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGgt                                                        <  1:1870987/101‑1 (MQ=255)

                                          cGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGgtg                                                       <  1:1870617/101‑1 (MQ=255)

                                           ggCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTAc                                                            >  2:1871336/1‑95 (MQ=255)

                                            gCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGtt                                                     >  1:1871337/1‑101 (MQ=255)

                                            gCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCCGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGtt                                                     <  1:1870953/101‑1 (MQ=255)

                                              ttCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTAt                                                   <  2:1870889/101‑1 (MQ=255)

                                              ttCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTAt                                                   >  2:1871342/1‑101 (MQ=255)

                                                cGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCa                                                 >  2:1871346/1‑101 (MQ=255)

                                                 ggTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCaa                                                >  1:1871347/1‑101 (MQ=255)

                                                  gTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCgg                                                         <  1:1871081/91‑1 (MQ=255)

                                                    gAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACgg                                             >  2:1871351/1‑101 (MQ=255)

                                                     aaaCTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGc                                            >  1:1871355/1‑101 (MQ=255)

                                                     aaaCTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGc                                            >  2:1871356/1‑101 (MQ=255)

                                                     aaaCTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGc                                            <  1:1871044/101‑1 (MQ=255)

                                                      aaCTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCa                                           >  1:1871361/1‑101 (MQ=255)

                                                      aaCTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCa                                           >  2:1871362/1‑101 (MQ=255)

                                                       aCTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCaa                                          <  2:1870800/101‑1 (MQ=255)

                                                       aCTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCaa                                          <  1:1870899/101‑1 (MQ=255)

                                                        ctctGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCaaa                                         <  1:1870819/101‑1 (MQ=255)

                                                          ctgctgTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGt                                       >  2:1871368/1‑101 (MQ=255)

                                                          ctgctgTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGt                                       >  1:1871369/1‑101 (MQ=255)

                                                          ctgctgTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGt                                       <  1:1871111/101‑1 (MQ=255)

                                                             ctgTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTaa                                    >  2:1871374/1‑101 (MQ=255)

                                                              tgTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAg                                   >  1:1871375/1‑101 (MQ=255)

                                                                tCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAggg                                 <  2:1871026/101‑1 (MQ=255)

                                                                  ccGTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGggcg                               >  1:1871380/1‑101 (MQ=255)

                                                                    gTGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAg                                   >  2:1871382/1‑95 (MQ=255)

                                                                     tGAGAAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCt                            <  1:1870706/101‑1 (MQ=255)

                                                                       agaAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTc                          <  2:1871172/101‑1 (MQ=255)

                                                                        gaAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCa                         >  2:1871387/1‑101 (MQ=255)

                                                                        gaAAGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCa                         <  2:1870718/101‑1 (MQ=255)

                                                                         aaaGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCAc                        <  2:1871041/101‑1 (MQ=255)

                                                                         aaaGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCAc                        >  2:1871390/1‑101 (MQ=255)

                                                                          aaGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACt                       >  1:1871392/1‑101 (MQ=255)

                                                                          aaGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACt                       <  2:1870836/101‑1 (MQ=255)

                                                                          aaGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACt                       <  2:1871239/101‑1 (MQ=255)

                                                                           aGCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTg                      >  1:1871396/1‑101 (MQ=255)

                                                                            gCTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGt                     >  2:1871397/1‑101 (MQ=255)

                                                                             cTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGtt                    >  2:1871401/1‑101 (MQ=255)

                                                                             cTAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGtt                    <  1:1870973/101‑1 (MQ=255)

                                                                              tAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTg                   >  1:1871403/1‑101 (MQ=255)

                                                                              tAAACGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTg                   <  1:1871004/101‑1 (MQ=255)

                                                                                 aCGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGc                <  1:1871016/101‑1 (MQ=255)

                                                                                  cGTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCt               >  2:1871407/1‑101 (MQ=255)

                                                                                   gTCACGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTg              >  1:1871410/1‑101 (MQ=255)

                                                                                      aCGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGgtg                                                       >  2:1871415/1‑57 (MQ=255)

                                                                                       cGAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTGAACg          <  1:1870998/101‑1 (MQ=255)

                                                                                        gAAGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTGAACgg         >  1:1871416/1‑101 (MQ=255)

                                                                                         aaGCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTGAACGGt        <  1:1870905/101‑1 (MQ=255)

                                                                                           gCCTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTGAACGGTAt      <  1:1870932/101‑1 (MQ=255)

                                                                                            ccTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTGAACGGTAtt     >  1:1871421/1‑101 (MQ=255)

                                                                                             cTGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTGAACGGTATTc    >  2:1871423/1‑101 (MQ=255)

                                                                                              tGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACt                                                                 <  1:1870885/39‑1 (MQ=255)

                                                                                              tGGAACACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTGAACGGTATTCg   >  1:1871425/1‑101 (MQ=255)

GGTAGGTGACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGATCACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTGAACGGTATTCGT  >  NC_000913/962183‑962378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`