BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,199,473	T→C	V260A (GTG→GCG)	lit →	e14 prophage; cell death peptidase Lit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,199,473	0	T	C	100.0%	1656.6 / NA	385	V260A (GTG→GCG)	lit	e14 prophage; cell death peptidase Lit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (174/211); total (174/211)

Only 100 of 385 total aligned reads displayed.

TTTACAAAATACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCA  >  NC_000913/1199375‑1199570

 ttACAAAATACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGAt                                                                                                <  2:2285904/101‑1 (MQ=255)

 ttACAAAATACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGAt                                                                                                <  1:2286075/101‑1 (MQ=255)

 ttACAAAATACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGAt                                                                                                <  2:2285472/101‑1 (MQ=255)

 ttACAAAATACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGAt                                                                                                <  2:2286088/101‑1 (MQ=255)

 ttACAAAATACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGAt                                                                                                >  2:2286628/1‑101 (MQ=255)

  tACAAAATACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATg                                                                                               >  1:2286630/1‑101 (MQ=255)

   aCAAAATACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGc                                                                                              >  1:2286636/1‑101 (MQ=255)

      aaaTACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTc                                                                                           >  1:2286641/1‑101 (MQ=255)

        aTACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCaa                                                                                         <  1:2286161/101‑1 (MQ=255)

        aTACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCaa                                                                                         >  1:2286644/1‑101 (MQ=255)

        aTACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCaa                                                                                         >  2:2286645/1‑101 (MQ=255)

        aTACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCaa                                                                                         <  2:2285979/101‑1 (MQ=255)

          acacacCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAata                                                                                       >  1:2286650/1‑101 (MQ=255)

          acacacCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAata                                                                                       <  2:2285713/101‑1 (MQ=255)

            acacCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATc                                                                                     >  1:2286655/1‑101 (MQ=255)

            acacCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATc                                                                                     <  1:2286208/101‑1 (MQ=255)

             cacCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCt                                                                                    <  1:2286046/101‑1 (MQ=255)

              acCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCtt                                                                                   >  2:2286660/1‑101 (MQ=255)

              acCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCtt                                                                                   <  1:2286130/101‑1 (MQ=255)

              acCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCtt                                                                                   <  2:2285856/101‑1 (MQ=255)

               cccAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCttt                                                                                  >  1:2286662/1‑101 (MQ=255)

                ccAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCtttt                                                                                 <  1:2285919/101‑1 (MQ=255)

                 cAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTc                                                                                <  2:2285620/101‑1 (MQ=255)

                 cAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTc                                                                                >  2:2286666/1‑101 (MQ=255)

                  aGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTcc                                                                               >  1:2286669/1‑101 (MQ=255)

                  aGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTcc                                                                               <  2:2285970/101‑1 (MQ=255)

                    cTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCAt                                                                             <  2:2286155/101‑1 (MQ=255)

                    cTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCAt                                                                             >  1:2286673/1‑101 (MQ=255)

                      gCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATgg                                                                           <  2:2286123/101‑1 (MQ=255)

                      gCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATgg                                                                           <  2:2286079/101‑1 (MQ=255)

                      gCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATgg                                                                           <  2:2286491/101‑1 (MQ=255)

                       cATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCCTGGc                                                                          <  2:2286252/101‑1 (MQ=255)

                       cATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGc                                                                          >  1:2286680/1‑101 (MQ=255)

                        atatGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCa                                                                         >  2:2286682/1‑101 (MQ=255)

                         tatGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCaa                                                                        >  1:2286687/1‑101 (MQ=255)

                          atGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCaaa                                                                       >  2:2286690/1‑101 (MQ=255)

                          atGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCaaa                                                                       <  1:2286092/101‑1 (MQ=255)

                             aGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAat                                                                    >  1:2286695/1‑101 (MQ=255)

                              gCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAata                                                                   <  2:2286024/101‑1 (MQ=255)

                              gCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAata                                                                   <  1:2285892/101‑1 (MQ=255)

                                 tatataTTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCa                                                                >  1:2286700/1‑101 (MQ=255)

                                 tatataTTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCa                                                                <  2:2286318/101‑1 (MQ=255)

                                  atatatTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCaa                                                               <  2:2285809/101‑1 (MQ=255)

                                  atatatTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCaa                                                               >  2:2286701/1‑101 (MQ=255)

                                   tatatTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAAt                                                              >  1:2286704/1‑101 (MQ=255)

                                     tatTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAAtgt                                                            >  1:2286709/1‑101 (MQ=255)

                                     tatTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAAtgt                                                            <  1:2286348/101‑1 (MQ=255)

                                          gAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATc                                                       >  1:2286714/1‑101 (MQ=255)

                                           aaTATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCt                                                      <  2:2286228/101‑1 (MQ=255)

                                           aaTATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCt                                                      <  1:2285936/101‑1 (MQ=255)

                                           aaTATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCt                                                      <  1:2286569/101‑1 (MQ=255)

                                            atatTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCGATGTGAATCTa                                                     <  2:2286066/101‑1 (MQ=255)

                                            atatTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTa                                                     >  2:2286720/1‑101 (MQ=255)

                                             tatTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAg                                                    >  1:2286722/1‑101 (MQ=255)

                                              atTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGa                                                   <  2:2286268/101‑1 (MQ=255)

                                                ttCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATg                                                 <  2:2286435/101‑1 (MQ=255)

                                                 tCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATgg                                                <  1:2285519/101‑1 (MQ=255)

                                                 tCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATgg                                                >  1:2286726/1‑101 (MQ=255)

                                                   aTGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATgggg                                              >  2:2286730/1‑101 (MQ=255)

                                                   aTGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATgggg                                              >  1:2286731/1‑101 (MQ=255)

                                                     gCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGaaa                                                        <  1:2285754/89‑2 (MQ=255)

                                                     gCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAg                                            <  1:2286103/101‑1 (MQ=255)

                                                     gCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAg                                            <  2:2286234/101‑1 (MQ=255)

                                                      cTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGt                                           <  2:2286042/101‑1 (MQ=255)

                                                       tACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTc                                          >  1:2286738/1‑101 (MQ=255)

                                                       tACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTc                                          >  2:2286739/1‑101 (MQ=255)

                                                          ccTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCtt                                       <  2:2286354/101‑1 (MQ=255)

                                                          ccTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCtt                                       >  1:2286745/1‑101 (MQ=255)

                                                           cTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCttt                                      <  1:2286235/101‑1 (MQ=255)

                                                              tCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCa                                   >  1:2286749/1‑101 (MQ=255)

                                                              tCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCa                                   >  2:2286750/1‑101 (MQ=255)

                                                               cGGAAATGAAGAGTTGGTTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCttt                                      <  2:2286364/97‑1 (MQ=255)

                                                                ggAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCTATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATc                                 <  1:2286481/101‑1 (MQ=255)

                                                                 gAAATGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCg                                <  1:2286190/101‑1 (MQ=255)

                                                                   aaTGAATAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGAt                              >  1:2286756/1‑101 (MQ=255)

                                                                    aTGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGAtt                             >  2:2286758/1‑101 (MQ=255)

                                                                     tGAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGAttt                            <  2:2286131/101‑1 (MQ=255)

                                                                      gAAGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGAtttt                           >  2:2286763/1‑101 (MQ=255)

                                                                       aaGAGTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTa                          <  2:2286110/101‑1 (MQ=255)

                                                                        agagTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAg                         >  1:2286767/1‑101 (MQ=255)

                                                                          agTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGt                       >  1:2286771/1‑101 (MQ=255)

                                                                          agTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGt                       <  2:2286220/101‑1 (MQ=255)

                                                                          agTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGt                       <  2:2286172/101‑1 (MQ=255)

                                                                           gTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTg                      <  2:2286211/101‑1 (MQ=255)

                                                                           gTTGATTGAAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTg                      >  2:2286774/1‑101 (MQ=255)

                                                                            ttgattgaAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGa                     <  2:2286194/101‑1 (MQ=255)

                                                                            ttgattgaAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGa                     <  1:2286284/101‑1 (MQ=255)

                                                                             tgattgaAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGAt                    <  1:2286224/101‑1 (MQ=255)

                                                                                ttgaAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGAtctt                 >  1:2286778/1‑101 (MQ=255)

                                                                                 tgaAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGAtcttc                <  1:2286264/101‑1 (MQ=255)

                                                                                  gaAGCTCTATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGAtcttct               >  1:2286782/1‑101 (MQ=255)

                                                                                      ctctATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCtgt           >  2:2286786/1‑101 (MQ=255)

                                                                                       tctATGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCtgtg          <  1:2286403/101‑1 (MQ=255)

                                                                                        ctATGTACAGCGAAGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCTGTGa         >  1:2286791/1‑101 (MQ=255)

                                                                                          aTGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCTGTGata       >  2:2286795/1‑101 (MQ=255)

                                                                                           tGTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCTGTGatat      <  1:2286248/101‑1 (MQ=255)

                                                                                            gTACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCTGTGATAtt     <  2:2286296/101‑1 (MQ=255)

                                                                                             tACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCTGTGATAttt    >  1:2286798/1‑101 (MQ=255)

                                                                                             tACAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCTGTGATAttt    <  1:2286367/101‑1 (MQ=255)

                                                                                              aCAGCGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTc   <  1:2286304/101‑1 (MQ=255)

TTTACAAAATACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCA  >  NC_000913/1199375‑1199570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`