Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,287,315 T→C noncoding (14/85 nt) tyrV ← tRNA‑Tyr

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,287,3150TC99.7% 1357.1 / ‑4.7 328noncoding (14/85 nt)tyrVtRNA‑Tyr
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (154/173);  total (155/173)
Fisher's exact test for biased strand distribution p-value = 4.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01

Only 100 of 331 total aligned reads displayed.

GGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCC  >  NC_000913/1287218‑1287412
                                                                                                 |                                                                                                 
gggaGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCgg                                                                                                <  2:2438955/98‑1 (MQ=255)
 gAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCggg                                                                                               >  1:2439541/1‑101 (MQ=255)
 gAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCggg                                                                                               <  2:2439145/101‑1 (MQ=255)
  aaGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGa                                                                                              >  2:2439543/1‑101 (MQ=255)
   aGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGaa                                                                                             <  1:2439129/101‑1 (MQ=255)
    gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAAc                                                                                            <  2:2439169/101‑1 (MQ=255)
    gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAAc                                                                                            <  2:2438945/101‑1 (MQ=255)
      tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCggg                                                                                               <  2:2439305/96‑1 (MQ=255)
       cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAAcccc                                                                                         <  2:2439101/101‑1 (MQ=255)
       cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAAcccc                                                                                         >  1:2439550/1‑101 (MQ=255)
        aGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAAcccc                                                                                         >  2:2439556/1‑100 (MQ=255)
        aGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCcca                                                                                        >  2:2439552/1‑101 (MQ=255)
        aGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCcca                                                                                        <  2:2439217/101‑1 (MQ=255)
           gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCccacca                                                                                     >  2:2439560/1‑101 (MQ=255)
           gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCccacca                                                                                     <  2:2439079/101‑1 (MQ=255)
           gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCccacca                                                                                     <  2:2439383/101‑1 (MQ=255)
           gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCccacca                                                                                     <  2:2439196/101‑1 (MQ=255)
            aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAg                                                                                    >  1:2439561/1‑101 (MQ=255)
             cTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAgg                                                                                   <  2:2439133/101‑1 (MQ=255)
             cTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAgg                                                                                   <  2:2438809/101‑1 (MQ=255)
                ttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGt                                                                                <  2:2439036/101‑1 (MQ=255)
                ttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGt                                                                                >  1:2439565/1‑101 (MQ=255)
                 tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTa                                                                               <  2:2438971/101‑1 (MQ=255)
                   aaaGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAAt                                                                             <  1:2438665/101‑1 (MQ=255)
                     aGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTc                                                                           <  2:2439023/101‑1 (MQ=255)
                      gTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCa                                                                          <  1:2439121/101‑1 (MQ=255)
                       tGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCaa                                                                         <  1:2439180/101‑1 (MQ=255)
                        gATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCaaa                                                                        <  2:2439008/101‑1 (MQ=255)
                        gATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCaaa                                                                        <  1:2439083/101‑1 (MQ=255)
                         aTGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAAt                                                                       <  1:2439476/101‑1 (MQ=255)
                             tggtggGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTg                                                                   <  2:2439153/101‑1 (MQ=255)
                              ggtggGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAgggg                                                                                 >  1:2439576/1‑86 (MQ=18)
                                tggGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAgg                                                                <  2:2439245/101‑1 (MQ=255)
                                  ggggAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTa                                                              >  1:2439580/1‑101 (MQ=255)
                                  ggggAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTa                                                              <  1:2439220/101‑1 (MQ=255)
                                   gggAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGGAATTCa                                                                          >  2:2439583/1‑88 (MQ=255)
                                    ggAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                                                            <  1:2439108/101‑1 (MQ=255)
                                     gAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATg                                                           <  2:2438873/101‑1 (MQ=255)
                                     gAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATg                                                           <  1:2439053/101‑1 (MQ=255)
                                     gAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATg                                                           <  1:2438894/101‑1 (MQ=255)
                                     gAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATg                                                           <  1:2438909/101‑1 (MQ=255)
                                     gAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATg                                                           <  1:2439290/101‑1 (MQ=255)
                                      aaGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGc                                                          <  1:2439003/101‑1 (MQ=255)
                                      aaGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGc                                                          >  1:2439587/1‑101 (MQ=255)
                                        ggATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCtt                                                        <  1:2439097/101‑1 (MQ=255)
                                        ggATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCtt                                                        >  1:2439591/1‑101 (MQ=255)
                                          aTTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTga                                                      >  1:2439596/1‑101 (MQ=255)
                                          aTTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGGaa                                                                              >  2:2439598/1‑77 (MQ=255)
                                             cGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAgggg                                                                                 >  2:2439602/1‑71 (MQ=21)
                                              gAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg                                                  >  1:2439604/1‑101 (MQ=255)
                                              gAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg                                                  <  2:2439274/101‑1 (MQ=255)
                                                aCCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggt                                                <  1:2439368/101‑1 (MQ=255)
                                                  cTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAgggg                                                                                 >  1:2439608/1‑66 (MQ=25)
                                                   ttCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAggg                                                                                  <  1:2439249/64‑1 (MQ=25)
                                                    tCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtggtg                                            >  2:2439614/1‑101 (MQ=255)
                                                     cGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGGAATTCAAATTTTGAGGTAATGCTTGAGAtcg                                                 >  1:2439616/1‑93 (MQ=255)
                                                      gAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg                                          >  2:2439619/1‑101 (MQ=255)
                                                      gAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg                                          <  2:2439201/101‑1 (MQ=255)
                                                       aaGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGGAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTgggg                                         >  2:2439622/1‑101 (MQ=255)
                                                        aGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg                                        >  1:2439625/1‑101 (MQ=255)
                                                        aGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg                                        <  1:2439401/101‑1 (MQ=255)
                                                           cGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAg                                     >  2:2439630/1‑101 (MQ=255)
                                                           cGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAg                                     <  1:2439190/101‑1 (MQ=255)
                                                            gATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAgg                                    >  2:2439635/1‑101 (MQ=255)
                                                             aTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGGaa                                                                              >  2:2439638/1‑58 (MQ=11)
                                                              tGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGat                                  >  1:2439640/1‑101 (MQ=255)
                                                                aCGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGatta                                >  1:2439643/1‑101 (MQ=255)
                                                                 cGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGatta                                <  1:2439171/100‑1 (MQ=255)
                                                                  ggCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGattatt                              <  2:2439186/101‑1 (MQ=255)
                                                                   gCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCaa                                                                         >  2:2439648/1‑57 (MQ=255)
                                                                    cAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATtcg                            >  1:2439650/1‑101 (MQ=255)
                                                                    cAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATtcg                            <  1:2439273/101‑1 (MQ=255)
                                                                     aGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAg                                                                                    >  2:2439656/1‑44 (MQ=255)
                                                                      gATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATtcgtc                          <  1:2439149/101‑1 (MQ=255)
                                                                      gATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGGAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGattatt                              >  2:2439659/1‑97 (MQ=255)
                                                                       aTTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATtcgtcg                         <  2:2439363/101‑1 (MQ=255)
                                                                       aTTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATtcgtcg                         <  1:2439020/101‑1 (MQ=255)
                                                                       aTTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGATGGGGGAAGGATTATtcgtcg                         >  1:2439660/1‑101 (MQ=255)
                                                                          tACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGattatt                              >  2:2439666/1‑93 (MQ=255)
                                                                          tACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGtcgctt                      >  1:2439665/1‑101 (MQ=255)
                                                                            cAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGtcgcttcg                    <  1:2439350/101‑1 (MQ=255)
                                                                            cAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGtcgcttcg                    <  1:2438835/101‑1 (MQ=255)
                                                                             aGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtg                                               >  1:2439675/1‑73 (MQ=255)
                                                                             aGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGtcgcttcgc                   >  2:2439672/1‑101 (MQ=255)
                                                                              gTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGtcgcttcgct                  >  2:2439676/1‑101 (MQ=255)
                                                                                 tGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGctcct               >  1:2439681/1‑101 (MQ=255)
                                                                                  gCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGctcctc              >  2:2439682/1‑101 (MQ=255)
                                                                                   cTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGctc                 <  2:2439284/97‑1 (MQ=255)
                                                                                   cTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCa             <  1:2439072/101‑1 (MQ=255)
                                                                                    tCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCAc            >  1:2439688/1‑101 (MQ=255)
                                                                                     cccTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCAcc           >  2:2439691/1‑101 (MQ=255)
                                                                                      ccTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCAccc          >  1:2439693/1‑101 (MQ=255)
                                                                                       cTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCt         >  1:2439696/1‑101 (MQ=255)
                                                                                         ttGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTc       >  2:2439701/1‑101 (MQ=255)
                                                                                         ttGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTc       <  1:2439227/101‑1 (MQ=255)
                                                                                          tGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCg      >  1:2439705/1‑101 (MQ=255)
                                                                                           ggCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCgg     >  2:2439706/1‑101 (MQ=255)
                                                                                             ccGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGc   <  2:2439321/101‑1 (MQ=255)
                                                                                              cGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATTGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGcc  <  2:2439112/101‑1 (MQ=255)
                                                                                              cGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAATGATTATTCGTCGCTTCGCTCCTCACCCTTc       >  1:2439712/1‑96 (MQ=255)
                                                                                                 |                                                                                                 
GGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCC  >  NC_000913/1287218‑1287412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑