Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,534,885 C→T intergenic (+16/+80) nhoA → / ← yddE arylamine N‑acetyltransferase/PF02567 family protein YddE

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,534,8850CT99.6% 1084.6 / ‑5.3 255intergenic (+16/+80)nhoA/yddEarylamine N‑acetyltransferase/PF02567 family protein YddE
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (123/131);  minor base A (1/0);  total (124/131)
Fisher's exact test for biased strand distribution p-value = 4.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 255 total aligned reads displayed.

ATGATGCGAAACATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCA  >  NC_000913/1534787‑1534982
                                                                                                  |                                                                                                 
 tgatgCGAAACATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGa                                                                                                >  1:2867270/1‑101 (MQ=255)
     gCGAAACATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATg                                                                                              >  2:2867276/1‑99 (MQ=255)
       gAAACATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATgcggc                                                                                          <  2:2866795/101‑1 (MQ=255)
       gAAACATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATgcggc                                                                                          <  1:2866966/101‑1 (MQ=255)
        aaaCATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATgcggcg                                                                                         >  1:2867279/1‑101 (MQ=255)
         aaCATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATgcgg                                                                                           >  2:2867280/1‑98 (MQ=255)
           cATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTaa                                                                                      <  1:2866453/101‑1 (MQ=255)
           cATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTaa                                                                                      <  2:2866672/101‑1 (MQ=255)
           cATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTaa                                                                                      <  1:2866877/101‑1 (MQ=255)
            aTGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTaaa                                                                                     >  2:2867282/1‑101 (MQ=255)
             tGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAAc                                                                                    <  1:2866793/101‑1 (MQ=255)
             tGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAAc                                                                                    <  1:2867042/101‑1 (MQ=255)
             tGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAAc                                                                                    <  1:2866994/101‑1 (MQ=255)
                cTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGcc                                                                                 >  1:2867289/1‑101 (MQ=255)
                cTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGcc                                                                                 <  1:2866882/101‑1 (MQ=255)
                 tttACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTaaa                                                                                     >  1:2867292/1‑96 (MQ=255)
                  ttACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCtt                                                                               <  1:2866760/101‑1 (MQ=255)
                  ttACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCtt                                                                               <  1:2866737/101‑1 (MQ=255)
                   tACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCt                                                                                >  2:2867296/1‑99 (MQ=255)
                   tACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTa                                                                              <  1:2866556/101‑1 (MQ=255)
                    aCCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTAt                                                                             >  2:2867298/1‑101 (MQ=255)
                    aCCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTAt                                                                             <  1:2866551/101‑1 (MQ=255)
                     ccGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATc                                                                            <  2:2867155/101‑1 (MQ=255)
                     ccGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATc                                                                            >  1:2867299/1‑101 (MQ=255)
                     ccGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATc                                                                            <  1:2866816/101‑1 (MQ=255)
                      cGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGGAAATAATTTATGTCAGGTTGCTgg                                                                                                 >  2:2867304/1‑79 (MQ=255)
                      cGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATcc                                                                           <  2:2866825/101‑1 (MQ=255)
                       gTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGa                                                                                                >  1:2867306/1‑79 (MQ=255)
                         ggATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGc                                                                        >  2:2867307/1‑101 (MQ=255)
                             gAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATAc                                                                    <  1:2866859/101‑1 (MQ=255)
                                ttAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACAtt                                                                 <  2:2866610/101‑1 (MQ=255)
                                ttAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACAtt                                                                 <  2:2866751/101‑1 (MQ=255)
                                ttAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACAtt                                                                 <  2:2866779/101‑1 (MQ=255)
                                 tAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTa                                                                <  1:2866947/101‑1 (MQ=255)
                                 tAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTa                                                                >  1:2867313/1‑101 (MQ=255)
                                 tAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTa                                                                >  2:2867312/1‑101 (MQ=255)
                                    cgcTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGcc                                                             <  2:2866938/101‑1 (MQ=255)
                                      cTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCg                                                           >  2:2867317/1‑101 (MQ=255)
                                      cTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCg                                                           <  2:2867201/101‑1 (MQ=255)
                                       tGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCgg                                                          >  1:2867319/1‑101 (MQ=255)
                                       tGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCgg                                                          <  2:2866940/101‑1 (MQ=255)
                                        ggTGATGGGGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGt                                                         >  1:2867321/1‑101 (MQ=255)
                                           gATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGt                                                      <  1:2866862/101‑1 (MQ=255)
                                           gATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGt                                                      <  1:2866834/101‑1 (MQ=255)
                                            aTGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTa                                                     <  1:2866822/101‑1 (MQ=255)
                                                cggcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGAcc                                                 >  2:2867325/1‑101 (MQ=255)
                                                 ggcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCt                                                <  1:2866688/101‑1 (MQ=255)
                                                  gcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTg                                               <  2:2866846/101‑1 (MQ=255)
                                                   cgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGa                                              >  2:2867329/1‑101 (MQ=255)
                                                   cgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGa                                              >  1:2867328/1‑101 (MQ=255)
                                                      ttGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAg                                           <  1:2867187/101‑1 (MQ=255)
                                                       tGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAgg                                          >  2:2867332/1‑101 (MQ=255)
                                                         aTACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCg                                        >  1:2867334/1‑101 (MQ=255)
                                                          tACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGa                                       <  1:2867021/101‑1 (MQ=255)
                                                           aCGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGaa                                      <  1:2866753/101‑1 (MQ=255)
                                                            cGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAg                                                    <  1:2867007/86‑1 (MQ=255)
                                                             gCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAgc                                    <  1:2866837/101‑1 (MQ=255)
                                                             gCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAgc                                    <  2:2866811/101‑1 (MQ=255)
                                                             gCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAgc                                    >  1:2867339/1‑101 (MQ=255)
                                                              cACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGAt                                                                                               >  1:2867341/1‑41 (MQ=255)
                                                               aCCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAgcgc                                  >  2:2867342/1‑101 (MQ=255)
                                                                 ccGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCAt                                <  1:2867036/101‑1 (MQ=255)
                                                                 ccGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCAt                                <  1:2866769/101‑1 (MQ=255)
                                                                  cGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGTCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATc                               <  2:2866969/101‑1 (MQ=255)
                                                                  cGGAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGGAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAgg                                          >  2:2867345/1‑90 (MQ=255)
                                                                   ggAGGCGGGAAAATAATTTATGTCAGGTTGCTGGAt                                                                                               >  2:2867348/1‑36 (MQ=255)
                                                                   ggAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCa                              <  1:2867164/101‑1 (MQ=255)
                                                                    gAGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAg                             <  1:2866989/101‑1 (MQ=255)
                                                                     aGGCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGa                            >  2:2867350/1‑101 (MQ=255)
                                                                       gCGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACa                          >  1:2867353/1‑101 (MQ=255)
                                                                        cGGGAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCa                              >  2:2867355/1‑96 (MQ=255)
                                                                          ggAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCtt                                                                               <  2:2866715/45‑1 (MQ=255)
                                                                          ggAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTTTAGACCTGACAGGCGAAGCGCATCAGACAACg                       >  1:2867357/1‑101 (MQ=255)
                                                                          ggAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACg                       <  1:2866935/101‑1 (MQ=255)
                                                                           gAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACgg                      >  2:2867361/1‑101 (MQ=255)
                                                                           gAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACgg                      <  1:2866718/101‑1 (MQ=255)
                                                                           gAAAATAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACgg                      >  1:2867362/1‑101 (MQ=255)
                                                                            aaaaTAATTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGt                     >  1:2867364/1‑101 (MQ=255)
                                                                              aataatTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGttt                   >  1:2867369/1‑101 (MQ=255)
                                                                               ataatTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTc                  <  1:2867080/101‑1 (MQ=255)
                                                                                taatTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACa                          >  1:2867372/1‑92 (MQ=255)
                                                                                 aatTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCag                <  2:2866902/101‑1 (MQ=255)
                                                                                 aatTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCag                >  2:2867373/1‑101 (MQ=255)
                                                                                  atTTATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCaga               <  2:2867043/101‑1 (MQ=255)
                                                                                    ttATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGt             >  1:2867375/1‑101 (MQ=255)
                                                                                     tATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGtt            <  2:2866988/101‑1 (MQ=255)
                                                                                     tATGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGtt            >  1:2867378/1‑101 (MQ=255)
                                                                                      aTGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTc           >  2:2867380/1‑101 (MQ=255)
                                                                                      aTGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTc           <  1:2866499/101‑1 (MQ=255)
                                                                                      aTGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTc           >  1:2867383/1‑101 (MQ=255)
                                                                                      aTGTCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTc           <  1:2866960/101‑1 (MQ=255)
                                                                                         tCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAAt        <  1:2866906/101‑1 (MQ=255)
                                                                                         tCAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAAt        >  2:2867386/1‑101 (MQ=255)
                                                                                          cAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGt             >  1:2867390/1‑95 (MQ=255)
                                                                                          cAGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAAtt       >  1:2867388/1‑101 (MQ=255)
                                                                                           aGGTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTg      >  1:2867393/1‑101 (MQ=255)
                                                                                            ggTTGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGc     >  1:2867395/1‑101 (MQ=255)
                                                                                              ttGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCg                                        >  1:2867399/1‑64 (MQ=255)
                                                                                              ttGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGccc   <  2:2866921/101‑1 (MQ=255)
                                                                                               tGCTGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCa  <  2:2867004/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
ATGATGCGAAACATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCA  >  NC_000913/1534787‑1534982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: