BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,745,998	T→C	T44A (ACC→GCC)	ydhQ ←	adhesin‑like autotransporter YdhQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,745,998	0	T	C	100.0%	1285.6 / NA	304	T44A (ACC→GCC)	ydhQ	adhesin‑like autotransporter YdhQ
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (167/137); total (167/137)

Only 100 of 304 total aligned reads displayed.

ACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCG  >  NC_000913/1745900‑1746095

aCCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCAt                                                                                                 >  1:3220016/1‑101 (MQ=255)

aCCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCAt                                                                                                 >  2:3220019/1‑101 (MQ=255)

  cATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCAttt                                                                                               >  2:3220025/1‑101 (MQ=255)

   aTCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCAtttt                                                                                              <  2:3219699/101‑1 (MQ=255)

   aTCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCAtttt                                                                                              <  1:3219639/101‑1 (MQ=255)

   aTCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCAtttt                                                                                              >  2:3220029/1‑101 (MQ=255)

      gCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCCCTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCgg                                                                                           <  2:3219567/101‑1 (MQ=255)

      gCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCgg                                                                                           <  1:3219962/101‑1 (MQ=255)

       cTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGc                                                                                          >  2:3220034/1‑101 (MQ=255)

       cTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGc                                                                                          <  1:3219560/101‑1 (MQ=255)

       cTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGc                                                                                          >  1:3220033/1‑101 (MQ=255)

         gACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGctc                                                                                        >  2:3220038/1‑101 (MQ=255)

         gACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGctc                                                                                        <  2:3219537/101‑1 (MQ=255)

          aCCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGctct                                                                                       <  2:3219637/101‑1 (MQ=255)

          aCCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGctct                                                                                       >  2:3220041/1‑101 (MQ=255)

          aCCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGctct                                                                                       <  1:3219243/101‑1 (MQ=255)

           ccGATAGCGTGCTATTGTTACCGTACTGTGTGCATTTGGCGATCTCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCgg                                                                                           <  1:3219724/96‑1 (MQ=255)

           ccGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCtt                                                                                      <  1:3219373/101‑1 (MQ=255)

            cGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTc                                                                                     <  1:3220023/101‑1 (MQ=255)

             gATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTcc                                                                                    <  1:3219607/101‑1 (MQ=255)

             gATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTcc                                                                                    >  1:3220046/1‑101 (MQ=255)

             gATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTcc                                                                                    <  1:3219583/101‑1 (MQ=255)

             gATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTcc                                                                                    <  2:3219688/101‑1 (MQ=255)

              aTAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCg                                                                                   >  2:3220047/1‑101 (MQ=255)

               tAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGc                                                                                  >  2:3220050/1‑101 (MQ=255)

                aGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGcc                                                                                 >  2:3220054/1‑101 (MQ=255)

                aGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGcc                                                                                 <  1:3219603/101‑1 (MQ=255)

                 gCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCa                                                                                <  1:3219780/101‑1 (MQ=255)

                   gTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGc                                                                              <  1:3219592/101‑1 (MQ=255)

                   gTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGc                                                                              <  1:3219499/101‑1 (MQ=255)

                    tGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCt                                                                             >  1:3220059/1‑101 (MQ=255)

                    tGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCt                                                                             >  2:3220060/1‑101 (MQ=255)

                      ccATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTc                                                                           >  2:3220064/1‑101 (MQ=255)

                       cATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTca                                                                          <  2:3219582/101‑1 (MQ=255)

                        aTTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTcaa                                                                         >  1:3220067/1‑101 (MQ=255)

                         ttGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTcaac                                                                        >  1:3220071/1‑101 (MQ=255)

                         ttGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTcaac                                                                        >  2:3220073/1‑101 (MQ=255)

                           gTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTcaacaa                                                                      <  2:3219337/101‑1 (MQ=255)

                            ttACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAAt                                                                     <  2:3219730/101‑1 (MQ=255)

                             tACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATc                                                                    >  2:3220076/1‑101 (MQ=255)

                              aCCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCa                                                                   <  2:3219469/101‑1 (MQ=255)

                                 gTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACt                                                                >  1:3220080/1‑101 (MQ=255)

                                  tACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTc                                                               <  1:3219663/101‑1 (MQ=255)

                                  tACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCAAGCTTCAACAATCAACTc                                                               >  2:3220084/1‑101 (MQ=255)

                                   aCTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCg                                                              >  1:3220086/1‑101 (MQ=255)

                                     tgtgtgCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGcc                                                            >  2:3220091/1‑101 (MQ=255)

                                     tgtgtgCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGcc                                                            <  2:3219507/101‑1 (MQ=255)

                                       tgtgCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCtt                                                          >  1:3220094/1‑101 (MQ=255)

                                       tgtgCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCtt                                                          <  2:3219488/101‑1 (MQ=255)

                                       tgtgCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCtt                                                          >  2:3220096/1‑101 (MQ=255)

                                        gtgCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTc                                                         <  2:3219679/101‑1 (MQ=255)

                                          gCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAg                                                       <  2:3219751/101‑1 (MQ=255)

                                           cATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGt                                                      <  2:3219652/101‑1 (MQ=255)

                                           cATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGt                                                      >  1:3220101/1‑101 (MQ=255)

                                           cATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGt                                                      >  2:3220102/1‑101 (MQ=255)

                                            aTTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTa                                                     >  1:3220108/1‑101 (MQ=255)

                                            aTTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTa                                                     >  1:3220105/1‑101 (MQ=255)

                                              ttGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAg                                                       >  2:3220113/1‑97 (MQ=255)

                                               tGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGt                                                  <  2:3219949/101‑1 (MQ=255)

                                                  cGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGc                                               >  1:3220115/1‑101 (MQ=255)

                                                    aTCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGt                                             >  2:3220119/1‑101 (MQ=255)

                                                      cccACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTcg                                           >  2:3220122/1‑101 (MQ=255)

                                                       ccACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTcgc                                          <  1:3219737/101‑1 (MQ=255)

                                                        cACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTcgcg                                         <  2:3219611/101‑1 (MQ=255)

                                                        cACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTcgcg                                         <  2:3219598/101‑1 (MQ=255)

                                                        cACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTcgcg                                         >  2:3220127/1‑101 (MQ=255)

                                                        cACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTcgcg                                         >  1:3220125/1‑101 (MQ=255)

                                                         aCCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCgcgc                                        >  1:3220129/1‑101 (MQ=255)

                                                            ggTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCaa                                     >  1:3220134/1‑101 (MQ=255)

                                                            ggTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCaa                                     >  2:3220135/1‑101 (MQ=255)

                                                               tGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGa                                  >  1:3220139/1‑101 (MQ=255)

                                                                 ccACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGAcc                                >  2:3220141/1‑101 (MQ=255)

                                                                 ccACTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGAcc                                <  2:3219661/101‑1 (MQ=255)

                                                                    cTTTCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCg                             >  1:3220146/1‑101 (MQ=255)

                                                                      ttCAACCAGCCAGCCCCCGTGACCACGGCATTTTCgg                                                                                           >  2:3220150/1‑37 (MQ=255)

                                                                      ttCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCacc                                                                 >  1:3220149/1‑61 (MQ=255)

                                                                      ttCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGcc                           <  2:3219824/101‑1 (MQ=255)

                                                                       tCAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCg                          <  2:3219648/101‑1 (MQ=255)

                                                                        cAACCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATAACCTCGCCgg                         <  1:3219533/101‑1 (MQ=255)

                                                                          aCCAGCCAGCCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTc                       >  1:3220153/1‑101 (MQ=255)

                                                                            cagccagcCCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCtt                     >  1:3220157/1‑101 (MQ=255)

                                                                             agccagccCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTa                    <  1:3219673/101‑1 (MQ=255)

                                                                             agccagccCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTa                    >  2:3220160/1‑101 (MQ=255)

                                                                              gccagccCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTaa                   <  2:3219874/101‑1 (MQ=255)

                                                                              gccagccCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTaa                   <  1:3219752/101‑1 (MQ=255)

                                                                               ccagccCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAAc                  >  1:3220163/1‑101 (MQ=255)

                                                                                cagccCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTcgcg                                         >  1:3220167/1‑77 (MQ=255)

                                                                                cagccCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACa                 <  2:3219554/101‑1 (MQ=255)

                                                                                 agccCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACaa                >  2:3220168/1‑101 (MQ=255)

                                                                                  gccCCCGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAAt               <  1:3219702/101‑1 (MQ=255)

                                                                                    ccccGTGGCCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAAttt             >  1:3220175/1‑101 (MQ=255)

                                                                                    ccccGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAAttt             >  2:3220173/1‑101 (MQ=255)

                                                                                     cccGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTg            <  2:3219758/101‑1 (MQ=255)

                                                                                     cccGTGACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTg            >  2:3220177/1‑101 (MQ=255)

                                                                                          gACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGt       >  2:3220182/1‑101 (MQ=255)

                                                                                          gACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGt       <  2:3219742/101‑1 (MQ=255)

                                                                                          gACCACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGt       >  1:3220183/1‑101 (MQ=255)

                                                                                             cACGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTcc    <  1:3219842/101‑1 (MQ=255)

                                                                                              aCGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTccc   <  1:3219883/101‑1 (MQ=255)

                                                                                               cGGCATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCg  <  2:3219626/101‑1 (MQ=255)

ACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCG  >  NC_000913/1745900‑1746095

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`