Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,030,457 T→C *307Q (TAA→CAA) 
L154L (TTA→TTG
yedA →
vsr ←
putative transporter YedA
DNA mismatch endonuclease of the very short patch (VSP) mismatch repair pathway

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,030,4570TC100.0% 1237.1 / NA 292*307Q (TAA→CAA) 
L154L (TTA→TTG
yedA
vsr
putative transporter YedA
DNA mismatch endonuclease of the very short patch (VSP) mismatch repair pathway
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (162/130);  total (162/130)

Only 100 of 292 total aligned reads displayed.

CGTAATTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGTAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCAGCTTCTCGC  >  NC_000913/2030360‑2030554
                                                                                                 |                                                                                                 
cGTAATTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCaaa                                                                                                <  1:3702622/101‑1 (MQ=255)
cGTAATTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCCAGCaaa                                                                                                >  2:3703074/1‑101 (MQ=255)
 gTAATTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAAt                                                                                               <  1:3702534/101‑1 (MQ=255)
 gTAATTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAAt                                                                                               >  1:3703076/1‑101 (MQ=255)
  tAATTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATg                                                                                              >  1:3703082/1‑101 (MQ=255)
  tAATTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATg                                                                                              >  1:3703079/1‑101 (MQ=255)
  tAATTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATg                                                                                              <  2:3702673/101‑1 (MQ=255)
   aaTTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGa                                                                                             >  2:3703085/1‑101 (MQ=255)
    aTTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGaa                                                                                            <  1:3702414/101‑1 (MQ=255)
       gTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATcc                                                                                         >  1:3703088/1‑101 (MQ=255)
        tCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATccc                                                                                        <  2:3702620/101‑1 (MQ=255)
        tCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATccc                                                                                        >  2:3703090/1‑101 (MQ=255)
            cgcgGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGc                                                                                    >  1:3703094/1‑101 (MQ=255)
             gcgGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCg                                                                                   <  2:3702849/101‑1 (MQ=255)
              cgGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCgt                                                                                  >  2:3703096/1‑101 (MQ=255)
               ggtggtACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCgtg                                                                                 >  1:3703099/1‑101 (MQ=255)
                gtggtACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCgtgt                                                                                >  2:3703100/1‑101 (MQ=255)
                 tggtACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTc                                                                               <  2:3702890/101‑1 (MQ=255)
                   gtACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGa                                                                             >  1:3703105/1‑101 (MQ=255)
                    tACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATccc                                                                                        >  2:3703109/1‑89 (MQ=255)
                    tACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGAt                                                                            >  1:3703108/1‑101 (MQ=255)
                    tACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGAt                                                                            <  1:3702777/101‑1 (MQ=255)
                     aCTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATc                                                                           <  2:3702594/101‑1 (MQ=255)
                       tGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTg                                                                         >  1:499346/1‑101 (MQ=255)
                       tGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTg                                                                         <  2:3702647/101‑1 (MQ=255)
                        ggTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTgc                                                                        >  2:3703113/1‑101 (MQ=255)
                          tCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTgcgc                                                                      >  1:3703115/1‑101 (MQ=255)
                             cGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCt                                                                   <  2:3702693/101‑1 (MQ=255)
                              gTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCg                                                                                   >  1:3703118/1‑84 (MQ=255)
                              gTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTg                                                                  <  2:3702643/101‑1 (MQ=255)
                              gTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTg                                                                  <  1:3702589/101‑1 (MQ=255)
                              gTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTg                                                                  <  1:3702737/101‑1 (MQ=255)
                                tGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGc                                                                >  1:3703122/1‑101 (MQ=255)
                                 gggAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCa                                                               <  2:3702627/101‑1 (MQ=255)
                                    aaaaTATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCt                                                            >  2:3703124/1‑101 (MQ=255)
                                      aaTATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTc                                                          >  1:3703128/1‑101 (MQ=255)
                                        tatCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTcgc                                                        >  1:3703132/1‑101 (MQ=255)
                                        tatCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTcgc                                                        >  2:3703136/1‑101 (MQ=255)
                                         atCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTcgcc                                                       >  1:3703137/1‑101 (MQ=255)
                                            tctTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCa                                                    <  2:3702812/101‑1 (MQ=255)
                                             ctTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAg                                                   >  2:3703141/1‑101 (MQ=255)
                                              ttCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAAt                                                                                               >  2:3703147/1‑56 (MQ=255)
                                              ttCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGa                                                  >  1:3703145/1‑101 (MQ=255)
                                              ttCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGa                                                  <  1:3702573/101‑1 (MQ=255)
                                               tCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGAt                                                 >  1:3703153/1‑101 (MQ=255)
                                               tCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGAt                                                 >  2:3703151/1‑101 (MQ=255)
                                                cccGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATc                                                >  2:3703156/1‑101 (MQ=255)
                                                cccGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATc                                                <  2:3702583/101‑1 (MQ=255)
                                                 ccGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATcc                                               <  1:3702718/101‑1 (MQ=255)
                                                     cAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCActc                                           >  1:3703161/1‑101 (MQ=255)
                                                     cAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCActc                                           >  2:3703160/1‑101 (MQ=255)
                                                       aaaCCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCtt                                         <  1:3702521/101‑1 (MQ=255)
                                                       aaaCCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCtt                                         >  1:3703164/1‑101 (MQ=255)
                                                        aaCCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTc                                        >  2:3703168/1‑101 (MQ=255)
                                                         aCCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTcc                                       >  2:3703171/1‑101 (MQ=255)
                                                          cccGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCa                                                               <  1:3702657/76‑1 (MQ=255)
                                                           ccGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAg                                     >  2:3703173/1‑101 (MQ=255)
                                                             gTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTc                                        <  1:3702848/96‑1 (MQ=255)
                                                             gTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGAc                                   <  2:3702548/101‑1 (MQ=255)
                                                             gTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGAc                                   >  1:3703177/1‑101 (MQ=255)
                                                             gTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGAc                                   >  2:3703176/1‑101 (MQ=255)
                                                              tAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACg                                  <  2:3702709/101‑1 (MQ=255)
                                                                gTTGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCt                                <  2:3702764/101‑1 (MQ=255)
                                                                 ttGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATg                                                                                              <  1:3702638/38‑1 (MQ=255)
                                                                 ttGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCtt                                         <  2:3702579/91‑1 (MQ=255)
                                                                 ttGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTcc                                       >  2:3703181/1‑93 (MQ=255)
                                                                  tGCGCCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATcc                                               <  2:3702775/84‑1 (MQ=255)
                                                                   gcgcCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCgg                             >  2:3703185/1‑101 (MQ=255)
                                                                    cgcCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCg                                                                                   >  2:3703188/1‑46 (MQ=255)
                                                                    cgcCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGt                            <  1:3702758/101‑1 (MQ=255)
                                                                    cgcCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGt                            <  2:3702616/101‑1 (MQ=255)
                                                                     gcCAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTa                           <  2:3702984/101‑1 (MQ=255)
                                                                      ccAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTaa                          >  1:3703190/1‑101 (MQ=255)
                                                                       cAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAg                         <  1:3702744/101‑1 (MQ=255)
                                                                       cAGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAg                         <  1:3702674/101‑1 (MQ=255)
                                                                        aGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCgg                             >  2:3703195/1‑96 (MQ=255)
                                                                        aGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAgc                        >  1:3703194/1‑101 (MQ=255)
                                                                        aGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAgc                        <  1:3702965/101‑1 (MQ=255)
                                                                        aGTTATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAgc                        <  1:3702822/101‑1 (MQ=255)
                                                                          ttATTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAgcgc                      >  2:3703198/1‑101 (MQ=255)
                                                                            aTTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCtt                    >  1:3703204/1‑101 (MQ=255)
                                                                            aTTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCtt                    <  1:3702799/101‑1 (MQ=255)
                                                                            aTTCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCtt                    >  2:3703203/1‑101 (MQ=255)
                                                                             ttCAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTc                   <  1:3702692/101‑1 (MQ=255)
                                                                               cAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCAt                 <  1:3702663/101‑1 (MQ=255)
                                                                               cAGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCAt                 >  2:3703209/1‑101 (MQ=255)
                                                                                aGGACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATc                >  2:3703214/1‑101 (MQ=255)
                                                                                aGGACGCATCAAGCGAGCAAATGAATCCCCTACGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATc                >  1:3703212/1‑101 (MQ=255)
                                                                                 ggACGCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATcc               >  1:3703216/1‑101 (MQ=255)
                                                                                     gCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCa           <  2:3702783/101‑1 (MQ=255)
                                                                                     gCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCa           >  1:3703220/1‑101 (MQ=255)
                                                                                     gCATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCa           <  2:3702797/101‑1 (MQ=255)
                                                                                      cATCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCAg          >  2:3703223/1‑101 (MQ=255)
                                                                                       aTCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCAGc         >  2:3703226/1‑101 (MQ=255)
                                                                                        tCAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCAGCt        <  2:3702736/101‑1 (MQ=255)
                                                                                         cAAGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCAGCtt       <  2:3702727/101‑1 (MQ=255)
                                                                                          aaGCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTCATCCGTCAGCTtct     >  1:3703228/1‑101 (MQ=255)
                                                                                            gCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCAGCTtctc    <  1:3702749/101‑1 (MQ=255)
                                                                                            gCGAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCAGCTtctc    >  1:3703231/1‑101 (MQ=255)
                                                                                              gAGCAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCAGCTTCTcgc  <  2:3702634/101‑1 (MQ=255)
                                                                                                 |                                                                                                 
CGTAATTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGTAAATGAATCCCCTGCGTGTCGATCTGCGCGCTGGCACCTTCGCCGCAGATCCACTCTTCCAGACGCTCGGTAAGCGCTTCATCCGTCAGCTTCTCGC  >  NC_000913/2030360‑2030554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: