Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 418,132 A→G M82V (ATG→GTG)  phoR → sensory histidine kinase PhoR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913418,1320AG100.0% 1326.3 / NA 316M82V (ATG→GTG) phoRsensory histidine kinase PhoR
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (135/181);  total (135/181)

Only 100 of 316 total aligned reads displayed.

ATTTATTGCGCCTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGATGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCGGTGGTGCTGAC  >  NC_000913/418034‑418229
                                                                                                  |                                                                                                 
 tttATTGCGCCTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGc                                                                                                >  1:846025/1‑101 (MQ=255)
  ttATTGCGCCTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCa                                                                                               <  2:845571/101‑1 (MQ=255)
  ttATTGCGCCTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCa                                                                                               >  2:846027/1‑101 (MQ=255)
   tATTGCGCCTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAg                                                                                              >  2:846030/1‑101 (MQ=255)
          ccTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGaa                                                                                       >  1:846042/1‑101 (MQ=255)
           cTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGaaa                                                                                      >  1:846048/1‑101 (MQ=255)
           cTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGaaa                                                                                      <  2:845623/101‑1 (MQ=255)
           cTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGaaa                                                                                      <  1:845754/101‑1 (MQ=255)
           cTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGaaa                                                                                      >  2:846046/1‑101 (MQ=255)
            tttCATGGTGGCTGTGGGTGGATCGCAGTATGCCCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCa                                                                                               <  1:845119/91‑1 (MQ=255)
              tCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGaaa                                                                                      >  2:846060/1‑98 (MQ=255)
               cATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATaaa                                                                                  <  1:845585/101‑1 (MQ=255)
               cATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATaaa                                                                                  >  1:846061/1‑101 (MQ=255)
                aTGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCGCCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATaaaa                                                                                 <  2:845822/101‑1 (MQ=255)
                aTGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATaaaa                                                                                 <  2:845346/101‑1 (MQ=255)
                aTGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATaaaa                                                                                 <  1:845285/101‑1 (MQ=255)
                 tggtggCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATaaaaa                                                                                >  1:846067/1‑101 (MQ=255)
                 tggtggCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATaaaaa                                                                                <  2:845430/101‑1 (MQ=255)
                  ggtggCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATaaaaaa                                                                               <  1:845513/101‑1 (MQ=255)
                   gtggCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAAc                                                                              <  1:845216/101‑1 (MQ=255)
                   gtggCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGAGAAATAAAAAAc                                                                              <  1:845552/101‑1 (MQ=255)
                      gCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAAcgcc                                                                           >  1:846073/1‑101 (MQ=255)
                      gCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAAcgcc                                                                           >  2:846075/1‑101 (MQ=255)
                        tgtgGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAAcgccgc                                                                         >  1:846082/1‑101 (MQ=255)
                            ggtggATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTg                                                                     >  1:846087/1‑101 (MQ=255)
                            ggtggATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTg                                                                     <  1:845450/101‑1 (MQ=255)
                                 aTCGCAGTATGCCCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTg                                                                                           <  2:845445/74‑1 (MQ=255)
                                 aTCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTg                                                                >  2:846089/1‑101 (MQ=255)
                                    gCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGc                                                             >  1:846093/1‑101 (MQ=255)
                                      aGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCaa                                                           >  1:846097/1‑101 (MQ=255)
                                       gTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAAt                                                          >  1:846103/1‑101 (MQ=255)
                                        tATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATc                                                         >  2:846106/1‑101 (MQ=255)
                                             ccccGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCaa                                                           <  1:845658/94‑1 (MQ=255)
                                                cGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCa                                                            <  1:845518/90‑1 (MQ=255)
                                                  ccACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTgg                                                               >  2:846112/1‑85 (MQ=255)
                                                  ccACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACg                                               <  2:845357/101‑1 (MQ=255)
                                                    aCCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGaa                                                                                       <  1:845644/59‑1 (MQ=255)
                                                    aCCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCt                                             >  2:846115/1‑101 (MQ=255)
                                                     ccGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAg                                                                                              <  1:845263/51‑1 (MQ=255)
                                                      cGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCttt                                           <  1:845270/101‑1 (MQ=255)
                                                       ggggCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGc                                                                                                <  2:845214/47‑1 (MQ=255)
                                                       ggggCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATaaaa                                                                                 <  1:845462/62‑1 (MQ=255)
                                                       ggggCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGt                                                                      <  1:845385/73‑1 (MQ=255)
                                                       ggggCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACt                                                                 <  1:845438/78‑1 (MQ=255)
                                                       ggggCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTaa                                                  <  1:845508/93‑1 (MQ=255)
                                                       ggggCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTc                                          <  2:845497/101‑1 (MQ=255)
                                                       ggggCGTAGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAAcgc                                                                            <  1:845619/67‑1 (MQ=255)
                                                        gggCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCg                                         <  1:845910/101‑1 (MQ=255)
                                                         ggCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAAcgccgcag                                                                       <  1:845345/70‑3 (MQ=255)
                                                         ggCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGt                                        <  2:846099/101‑1 (MQ=255)
                                                         ggCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGt                                        <  1:845526/101‑1 (MQ=255)
                                                          gCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTa                                       >  1:846119/1‑101 (MQ=255)
                                                           cGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAg                                      >  2:846120/1‑101 (MQ=255)
                                                            gTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAgc                                     >  2:846123/1‑101 (MQ=255)
                                                            gTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAgc                                     <  2:845483/101‑1 (MQ=255)
                                                             tGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAgcg                                    <  2:845318/101‑1 (MQ=255)
                                                               gTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAgcggc                                  <  1:845565/101‑1 (MQ=255)
                                                               gTAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAgcggc                                  <  1:845479/101‑1 (MQ=255)
                                                                tAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAgcggcg                                 <  2:845553/101‑1 (MQ=255)
                                                                tAGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAgcggcg                                 <  2:845532/101‑1 (MQ=255)
                                                                 aGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGgcgc                                <  1:845427/101‑1 (MQ=255)
                                                                 aGCTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGgcgc                                >  2:846127/1‑101 (MQ=255)
                                                                   cTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCgg                              <  1:845955/101‑1 (MQ=255)
                                                                   cTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCgg                              >  2:846131/1‑101 (MQ=255)
                                                                   cTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCgg                              <  2:845295/101‑1 (MQ=255)
                                                                   cTGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCgg                              >  1:846133/1‑101 (MQ=255)
                                                                    tGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGa                             <  1:845469/101‑1 (MQ=255)
                                                                    tGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGa                             >  1:846138/1‑101 (MQ=255)
                                                                    tGGGAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGa                             >  2:846139/1‑101 (MQ=255)
                                                                     gggAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAg                            <  2:845395/101‑1 (MQ=255)
                                                                      ggAACCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCTCGGAGt                           <  1:845573/101‑1 (MQ=255)
                                                                        aaCCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCg                         >  1:846144/1‑101 (MQ=255)
                                                                         aCCGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGc                        <  1:845400/101‑1 (MQ=255)
                                                                          ccGCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCgtt                       <  1:845612/101‑3 (MQ=255)
                                                                            gCTACTATACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGc                     >  1:846147/1‑101 (MQ=255)
                                                                             ctactaTACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGcc                    <  1:845727/101‑1 (MQ=255)
                                                                             ctactaTACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGcc                    <  2:845742/101‑1 (MQ=255)
                                                                             ctactaTACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGcc                    >  2:846150/1‑101 (MQ=255)
                                                                              tactaTACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGccc                   <  2:845463/101‑1 (MQ=255)
                                                                              tactaTACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGccc                   <  2:845715/101‑1 (MQ=255)
                                                                               actaTACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCg                  <  2:845965/101‑1 (MQ=255)
                                                                               actaTACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCg                  <  1:845678/101‑1 (MQ=255)
                                                                               actaTACGGCTTACACCAGGCGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGAtt                                                    >  2:846154/1‑67 (MQ=255)
                                                                                ctaTACGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGa                 >  1:846155/1‑101 (MQ=255)
                                                                                  ataCGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGAcg               <  1:845693/101‑1 (MQ=255)
                                                                                   taCGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGAcgc              <  1:845188/101‑1 (MQ=255)
                                                                                    aCGGCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGAcgcg             >  2:846160/1‑101 (MQ=255)
                                                                                      ggCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCggt           >  1:846161/1‑101 (MQ=255)
                                                                                       gCTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCggtg          <  1:845000/101‑1 (MQ=255)
                                                                                        cTTACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCggtgg         >  2:846165/1‑101 (MQ=255)
                                                                                         ttACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCggtggt        <  1:845632/101‑1 (MQ=255)
                                                                                         ttACACCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCggtggt        >  1:846168/1‑101 (MQ=255)
                                                                                           acacCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCGGTGGTGc      <  2:845596/101‑1 (MQ=255)
                                                                                           acacCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCGGTGGTGc      <  1:845361/101‑1 (MQ=255)
                                                                                            cacCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCGGTGGTGCt     >  1:846173/1‑101 (MQ=255)
                                                                                            cacCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCGGTGGTGCt     >  2:846172/1‑101 (MQ=255)
                                                                                             acCAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCGGTGGTGCTg    <  2:845631/101‑1 (MQ=255)
                                                                                              ccAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCGgtggtg       <  2:845657/97‑1 (MQ=255)
                                                                                               cAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGcc                    >  1:846183/1‑83 (MQ=255)
                                                                                               cAGGTGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCGGTGGTGCTGAc  >  1:846178/1‑101 (MQ=255)
                                                                                                  |                                                                                                 
ATTTATTGCGCCTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGATGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCGGTGGTGCTGAC  >  NC_000913/418034‑418229

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑