BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	500,945	C→T	A274V (GCG→GTG)	gsk →	inosine/guanosine kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	500,945	0	C	T	99.8%	1607.3 / NA	399	A274V (GCG→GTG)	gsk	inosine/guanosine kinase
Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (237/160); total (239/160)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 401 total aligned reads displayed.

GCAATTCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGCGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGTAAAACCCAGCAT  >  NC_000913/500847‑501042

 caATTCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCt                                                                                                >  1:1006622/1‑101 (MQ=255)

  aaTTCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTg                                                                                               >  1:1006630/1‑101 (MQ=255)

  aaTTCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTg                                                                                               >  2:1006628/1‑101 (MQ=255)

  aaTTCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTg                                                                                               <  2:1006263/101‑1 (MQ=255)

   aTTCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTgg                                                                                              <  2:1005902/101‑1 (MQ=255)

   aTTCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTgg                                                                                              >  2:1006634/1‑101 (MQ=255)

    ttCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTTCTGGa                                                                                             >  1:1006639/1‑101 (MQ=255)

    ttCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGa                                                                                             <  1:1006094/101‑1 (MQ=255)

     tCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGAc                                                                                            <  1:1006069/101‑1 (MQ=255)

     tCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGAc                                                                                            >  1:1006643/1‑101 (MQ=255)

      ccTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACt                                                                                           >  2:1006645/1‑101 (MQ=255)

        tCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTgg                                                                                         <  1:1006143/101‑1 (MQ=255)

        tCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTgg                                                                                         <  1:1006240/101‑1 (MQ=255)

        tCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTgg                                                                                         <  2:1006155/101‑1 (MQ=255)

         cAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTggg                                                                                        <  2:1006169/101‑1 (MQ=255)

          aaaGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGt                                                                                       >  1:1006651/1‑101 (MQ=255)

           aaGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTa                                                                                      >  2:1006654/1‑101 (MQ=255)

              aTCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGAt                                                                                   >  1:1006660/1‑101 (MQ=255)

               tCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATc                                                                                  <  1:1006030/101‑1 (MQ=255)

                cACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGa                                                                                    >  1:1006667/1‑98 (MQ=255)

                cACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCt                                                                                 >  2:1006663/1‑101 (MQ=255)

                cACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCt                                                                                 <  1:1005778/101‑1 (MQ=255)

                  cGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTgg                                                                               >  2:1006671/1‑101 (MQ=255)

                   gTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGt                                                                              <  1:1005871/101‑1 (MQ=255)

                   gTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGt                                                                              <  2:1006099/101‑1 (MQ=255)

                    tctcTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTg                                                                             >  1:1006677/1‑101 (MQ=255)

                    tctcTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTg                                                                             <  2:1005777/101‑1 (MQ=255)

                      tctATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCt                                                                           <  2:1006184/101‑1 (MQ=255)

                       ctATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCtg                                                                          >  2:1006682/1‑101 (MQ=255)

                        tATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCtgt                                                                         <  2:1006119/101‑1 (MQ=255)

                        tATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCtgt                                                                         <  1:1006192/101‑1 (MQ=255)

                        tATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCtgt                                                                         >  1:1006685/1‑101 (MQ=255)

                         aaccTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTgg                                                                                              <  2:1005977/77‑1 (MQ=255)

                          tCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGc                                                                       >  1:1006691/1‑101 (MQ=255)

                           ccTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCa                                                                      >  2:1006694/1‑101 (MQ=255)

                           ccTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCa                                                                      >  2:1006698/1‑101 (MQ=255)

                            cTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCAc                                                                     >  1:1006701/1‑101 (MQ=255)

                              tGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCAccg                                                                   <  2:1006209/101‑1 (MQ=255)

                               gCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCAccgc                                                                  >  2:1006706/1‑101 (MQ=255)

                                cGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCAccgcc                                                                 >  2:1006711/1‑101 (MQ=255)

                                 gATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCAccgcc                                                                 >  1:1006716/1‑100 (MQ=255)

                                  aTGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCgg                                                               >  2:1006717/1‑101 (MQ=255)

                                        gAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAAt                                                         >  1:1006727/1‑101 (MQ=255)

                                        gAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAAt                                                         <  2:1006147/101‑1 (MQ=255)

                                        gAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAAt                                                         >  2:1006729/1‑101 (MQ=255)

                                         aaGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATc                                                        <  2:1006435/101‑1 (MQ=255)

                                          aGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCg                                                       >  2:1006736/1‑101 (MQ=255)

                                          aGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCg                                                       <  2:1006058/101‑1 (MQ=255)

                                          aGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCg                                                       >  1:1006735/1‑101 (MQ=255)

                                             tGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCt                                                    >  2:1006741/1‑101 (MQ=255)

                                                 gCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCt                                                    >  2:1006747/1‑97 (MQ=255)

                                                  ccGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGtat                                               >  1:1006748/1‑101 (MQ=255)

                                                    gAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCTCCGCCGGGCCAATCGGCTTGTatat                                             >  1:1006758/1‑101 (MQ=255)

                                                    gAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTatat                                             >  2:1006754/1‑101 (MQ=255)

                                                    gAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTatat                                             <  1:1005906/101‑1 (MQ=255)

                                                     aaGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATg                                            <  1:1006304/101‑1 (MQ=255)

                                                     aaGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATg                                            <  1:1006267/101‑1 (MQ=255)

                                                      aGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATgg                                           <  1:1006213/101‑1 (MQ=255)

                                                      aGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATgg                                           >  2:1006762/1‑101 (MQ=255)

                                                          ttGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGa                                                                                    <  1:1005959/56‑1 (MQ=255)

                                                          ttGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATg                                            <  1:1006344/96‑1 (MQ=255)

                                                          ttGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATTGCggg                                       >  2:1006766/1‑101 (MQ=255)

                                                          ttGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCggg                                       <  1:1006175/101‑1 (MQ=255)

                                                           tGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGc                                      <  1:1006387/101‑1 (MQ=255)

                                                            gACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGtata                                              >  1:1006770/1‑92 (MQ=255)

                                                             aCCGGAGAAAGCGATCCTTTGTTGGCATCTGACAAGGTGCTg                                                                                               <  2:1005951/42‑1 (MQ=255)

                                                             aCCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCggg                                       >  2:1006772/1‑98 (MQ=255)

                                                              ccGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTatat                                             >  1:1006779/1‑91 (MQ=255)

                                                              ccGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATg                                            >  2:1006778/1‑92 (MQ=255)

                                                                ggAGAAAGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCggg                                       >  2:1006784/1‑95 (MQ=255)

                                                                    aaaGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGc                                          >  2:1006791/1‑88 (MQ=255)

                                                                    aaaGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGaa                             >  1:1006790/1‑101 (MQ=255)

                                                                     aaGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAg                            <  2:1006289/101‑1 (MQ=255)

                                                                      aGCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCggg                                       >  2:1006797/1‑89 (MQ=255)

                                                                       gCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCtt                                                   >  2:1006802/1‑76 (MQ=255)

                                                                       gCGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGAc                          <  2:1006244/101‑1 (MQ=255)

                                                                        cGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCg                                                       >  2:1006807/1‑71 (MQ=255)

                                                                        cGATCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACg                         >  1:1006804/1‑101 (MQ=255)

                                                                          aTCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGtat                                               >  2:1006815/1‑77 (MQ=255)

                                                                          aTCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGaa                       >  1:1006813/1‑101 (MQ=255)

                                                                          aTCCGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGaa                       <  2:1006723/101‑1 (MQ=255)

                                                                             cGTTGTTGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGtata                                              >  2:1006819/1‑75 (MQ=255)

                                                                              gttgttGGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCgg                                        >  2:1006825/1‑80 (MQ=255)

                                                                               ttgttgGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGaa                  <  2:1005995/101‑1 (MQ=255)

                                                                                tgttgGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCggg                                       >  1:1006828/1‑79 (MQ=255)

                                                                                 gttgGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAAc                <  1:1005990/101‑1 (MQ=255)

                                                                                  ttgGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACg               >  1:1006832/1‑101 (MQ=255)

                                                                                   tgGCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGt              <  1:1006203/101‑1 (MQ=255)

                                                                                     gCATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGGTTTAcc                                >  2:1006838/1‑81 (MQ=255)

                                                                                      cATCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGTaaa           <  1:1006525/101‑1 (MQ=255)

                                                                                       aTCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGTaaaa          <  2:1006327/101‑1 (MQ=255)

                                                                                       aTCTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGTaaaa          >  1:1006839/1‑101 (MQ=255)

                                                                                         cTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGta                                                >  2:1006847/1‑61 (MQ=255)

                                                                                         cTGACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACg               >  1:1006846/1‑94 (MQ=255)

                                                                                           gACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGTAAAACCCa      >  1:1006852/1‑101 (MQ=255)

                                                                                           gACAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGTAAAACCCa      <  2:1006360/101‑1 (MQ=255)

                                                                                            aCAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCTCCGCCGGGCCAATCGGCTTGta                                                <  1:1006123/58‑1 (MQ=255)

                                                                                            aCAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCttt                                   >  2:1006857/1‑71 (MQ=255)

                                                                                             cAAGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGTAAAAc         >  1:1006860/1‑96 (MQ=255)

                                                                                               aGGTGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGTAAAACCCAGCAt  <  1:1005509/101‑1 (MQ=255)

GCAATTCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGCGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGTAAAACCCAGCAT  >  NC_000913/500847‑501042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`