BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,891,768	G→A	A52T (GCA→ACA)	mdtL →	efflux pump MdtL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,891,768	0	G	A	100.0%	1777.7 / NA	418	A52T (GCA→ACA)	mdtL	efflux pump MdtL
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (232/186); total (232/186)

Only 100 of 418 total aligned reads displayed.

TTGATATGTACCTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGGCAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTATTATTGCCTCGGTGTT  >  NC_000913/3891670‑3891865

ttGATATGTACCTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACa                                                                                                 <  1:7428491/101‑1 (MQ=255)

  gATATGTACCTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGc                                                                                               >  1:7428829/1‑101 (MQ=255)

  gATATGTACCTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGc                                                                                               >  2:7428827/1‑101 (MQ=255)

     atGTACCTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGc                                                                                            >  2:7428836/1‑101 (MQ=255)

      tGTACCTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCg                                                                                           <  2:7428259/101‑1 (MQ=255)

        tACCTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGAt                                                                                         >  1:7428840/1‑101 (MQ=255)

         aCCTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGc                                                                                               >  2:7428844/1‑94 (MQ=255)

          ccTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATg                                                                                        <  1:7428325/100‑1 (MQ=255)

           cTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGtt                                                                                      >  1:7428850/1‑101 (MQ=255)

           cTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGtt                                                                                      <  2:7428242/101‑1 (MQ=255)

           cTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGtt                                                                                      >  2:7428848/1‑101 (MQ=255)

            tCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTa                                                                                     <  1:7427783/101‑1 (MQ=255)

             cGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTAt                                                                                    <  1:7428307/101‑1 (MQ=255)

              gTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTAtt                                                                                   <  1:7428340/101‑1 (MQ=255)

               ttGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTAttt                                                                                  >  1:7428859/1‑101 (MQ=255)

                tGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTg                                                                                 >  2:7428861/1‑101 (MQ=255)

                   tttACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCg                                                                              >  2:7428866/1‑101 (MQ=255)

                   tttACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCg                                                                              <  2:7428591/101‑1 (MQ=255)

                    ttACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCgg                                                                             >  1:7428868/1‑101 (MQ=255)

                      aCCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTa                                                                           >  2:7428874/1‑101 (MQ=255)

                       ccGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTaa                                                                          <  2:7428219/101‑1 (MQ=255)

                        cgcgCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTaaa                                                                         >  2:7428878/1‑101 (MQ=255)

                        cgcgCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTaaa                                                                         <  2:7428128/101‑1 (MQ=255)

                        cgcgCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTGCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTaaa                                                                         <  2:7427964/101‑1 (MQ=255)

                          cgcATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGt                                                                       <  1:7428101/101‑1 (MQ=255)

                           gcATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTg                                                                      >  1:7428886/1‑101 (MQ=255)

                           gcATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTg                                                                      >  2:7428884/1‑101 (MQ=255)

                           gcATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTg                                                                      <  2:7428001/101‑1 (MQ=255)

                            cATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTgg                                                                     <  2:7428287/101‑1 (MQ=255)

                             aTCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGc                                                                    >  1:7428893/1‑101 (MQ=255)

                             aTCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGc                                                                    >  2:7428892/1‑101 (MQ=255)

                               cgccgcCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGc                                                                                               <  2:7428523/72‑1 (MQ=255)

                                gccgccGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGa                                                                 >  1:7428900/1‑101 (MQ=255)

                                gccgccGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGa                                                                 <  1:7428692/101‑1 (MQ=255)

                                 ccgccgATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGAt                                                                <  2:7428100/101‑1 (MQ=255)

                                  cgccgATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATc                                                               <  2:7428159/101‑1 (MQ=255)

                                  cgccgATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATc                                                               >  2:7428902/1‑101 (MQ=255)

                                  cgccgATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATc                                                               <  2:7428342/101‑1 (MQ=255)

                                   gccgATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCg                                                              <  2:7428064/101‑1 (MQ=255)

                                   gccgATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCg                                                              >  2:7428908/1‑101 (MQ=255)

                                      gATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTc                                                           >  1:7428913/1‑101 (MQ=255)

                                       aTCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCa                                                          <  2:7428196/101‑1 (MQ=255)

                                       aTCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCa                                                          >  2:7428917/1‑101 (MQ=255)

                                         ctcAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAgg                                                        >  1:7428924/1‑101 (MQ=255)

                                          tcAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCg                                                                              <  2:7428433/78‑1 (MQ=255)

                                           cAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGga                                                      <  2:7428228/101‑1 (MQ=255)

                                            aaTGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGgag                                                     <  2:7428538/101‑1 (MQ=255)

                                            aaTGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGgag                                                     >  2:7428929/1‑101 (MQ=255)

                                             aTGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGgaga                                                    >  1:7428930/1‑101 (MQ=255)

                                              tGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGaa                                                   <  1:7428069/101‑1 (MQ=255)

                                               gCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGaaa                                                  <  1:7428272/101‑1 (MQ=255)

                                               gCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGaaa                                                  <  1:7428429/101‑1 (MQ=255)

                                                  aGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAg                                                 >  2:7428938/1‑99 (MQ=255)

                                                  aGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGcc                                               <  1:7428349/101‑1 (MQ=255)

                                                    cGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAg                                                         >  1:7428949/1‑89 (MQ=255)

                                                    cGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAg                                                 >  2:7428948/1‑97 (MQ=255)

                                                    cGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCgg                                             >  1:7428943/1‑101 (MQ=255)

                                                     gAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGt                                            <  1:7428282/101‑1 (MQ=255)

                                                     gAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGt                                            <  2:7428275/101‑1 (MQ=255)

                                                      aaGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTc                                           <  1:7428223/101‑1 (MQ=255)

                                                      aaGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTc                                           <  2:7428503/101‑1 (MQ=255)

                                                       aGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCg                                          >  1:7428955/1‑101 (MQ=255)

                                                         cgcAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGcc                                        >  2:7428960/1‑101 (MQ=255)

                                                          gcAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCa                                       >  1:7428961/1‑101 (MQ=255)

                                                            aGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATa                                     >  2:7428967/1‑101 (MQ=255)

                                                               tGCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATAccc                                  >  1:7428971/1‑101 (MQ=255)

                                                                gCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCcg                                 >  1:7428976/1‑101 (MQ=255)

                                                                gCATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCcg                                 <  1:7428460/101‑1 (MQ=255)

                                                                 cATATTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCcgg                                >  2:7428980/1‑101 (MQ=255)

                                                                  atatTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCcggc                               <  2:7428361/101‑1 (MQ=255)

                                                                  atatTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCcggc                               <  2:7428304/101‑1 (MQ=255)

                                                                  atatTGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCcggc                               >  1:7428983/1‑101 (MQ=255)

                                                                     ttGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCcggcgcg                            >  2:7428989/1‑101 (MQ=255)

                                                                     ttGCGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCcggcgcg                            >  1:7428990/1‑101 (MQ=255)

                                                                        cGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCcggcgcggcg                         <  2:7428370/101‑1 (MQ=255)

                                                                        cGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCcggcgcggcg                         >  2:7428998/1‑101 (MQ=255)

                                                                        cGTTCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCcggcgcggcg                         >  1:7428997/1‑101 (MQ=255)

                                                                          ttCTCCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCt                       >  1:7429006/1‑101 (MQ=255)

                                                                           tctcCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCta                      <  2:7428407/101‑1 (MQ=255)

                                                                            ctcCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCtat                     >  2:7429011/1‑101 (MQ=255)

                                                                            ctcCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCtat                     <  1:7428504/101‑1 (MQ=255)

                                                                             tcCGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCtatt                    >  1:7429013/1‑101 (MQ=255)

                                                                              ccGTATATCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGAt                                                                <  1:7428149/56‑1 (MQ=255)

                                                                                 tataTCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCtatttatt                <  2:7428393/101‑1 (MQ=255)

                                                                                 tataTCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCtatttatt                <  1:7428191/101‑1 (MQ=255)

                                                                                 tataTCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCtatttatt                <  1:7428392/101‑1 (MQ=255)

                                                                                 tataTCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCtatttatt                >  1:7429019/1‑101 (MQ=255)

                                                                                  atatCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATttatta               >  1:7429023/1‑101 (MQ=255)

                                                                                  atatCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATttatta               >  2:7429024/1‑101 (MQ=255)

                                                                                   tatCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTtattat              >  1:7429028/1‑101 (MQ=255)

                                                                                    atCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGcc                                               >  2:7429037/1‑67 (MQ=255)

                                                                                    atCTGGCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTattatt             >  1:7429035/1‑101 (MQ=255)

                                                                                        ggCGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTATTATTGCCt         >  1:7429043/1‑101 (MQ=255)

                                                                                          cGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGt                                            <  2:7428021/64‑1 (MQ=255)

                                                                                          cGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTATTATTGCCTCg       <  2:7428332/101‑1 (MQ=255)

                                                                                          cGGGGATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTATTATTGCCTCg       >  2:7429048/1‑101 (MQ=255)

                                                                                           ggggATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTATTATTGCCTCgg      >  1:7429051/1‑101 (MQ=255)

                                                                                            gggATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTATTATTGCCTCGgt     >  2:7429056/1‑101 (MQ=255)

                                                                                             ggATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTattatt             >  1:7429058/1‑92 (MQ=255)

                                                                                             ggATGACAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTATTATTGCCTCGgtg    <  1:7428918/101‑1 (MQ=255)

TTGATATGTACCTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGGCAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTATTATTGCCTCGGTGTT  >  NC_000913/3891670‑3891865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`