BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,249,807	Δ1 bp	coding (91/1050 nt)	yeiH →	conserved inner membrane protein YeiH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,249,805	0	C	.	100.0%	1390.3 / NA	263	coding (89/1050 nt)	yeiH	conserved inner membrane protein YeiH
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (118/145); total (118/145)

Only 100 of 279 total aligned reads displayed.

AAGGAGAGGGTTATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCGCCCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCATCTA  >  NC_000913/2249705‑2249901

aaGGAGAGGGTTATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCGc                                                                                                  <  1:4051448/101‑1 (MQ=255)

 aGGAGAGGGTTATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCGcc                                                                                                 >  2:4052005/1‑101 (MQ=255)

  ggAGAGGGTTATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCGcct                                                                                                >  1:4052007/1‑100 (MQ=255)

  ggAGAGGGTTATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCGcct                                                                                                <  1:4051621/101‑2 (MQ=255)

    agagGGTTATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCGcctgt                                                                                              >  2:4052010/1‑98 (MQ=255)

     gagGGTTATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCGcctgtg                                                                                             >  2:4052012/1‑97 (MQ=255)

      agGGTTATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTgg                                                                                           >  1:4052014/1‑101 (MQ=255)

        ggTTATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTgggg                                                                                         <  1:4051565/101‑1 (MQ=255)

          ttATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGggtg                                                                                       <  2:4051298/101‑1 (MQ=255)

          ttATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGggtg                                                                                       <  2:4051414/101‑1 (MQ=255)

          ttATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGggtg                                                                                       >  1:4052021/1‑101 (MQ=255)

          ttATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGggtg                                                                                       >  2:4052022/1‑101 (MQ=255)

           tATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCGcct                                                                                                <  2:4051518/92‑2 (MQ=255)

              gACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTc                                                                                   >  1:4052025/1‑101 (MQ=255)

               aCGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTcc                                                                                  <  1:4051545/101‑1 (MQ=255)

               aCGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTcc                                                                                  >  2:4052029/1‑101 (MQ=255)

                 gAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCAt                                                                                >  1:4052030/1‑101 (MQ=255)

                  aaTATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCAtt                                                                               <  2:4051560/101‑1 (MQ=255)

                  aaTATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCAtt                                                                               <  2:4051534/101‑1 (MQ=255)

                    tatCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTcc                                                                             >  2:4052035/1‑101 (MQ=255)

                     atCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTccc                                                                            >  1:4052036/1‑101 (MQ=255)

                          cTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGt                                                                       >  1:4052041/1‑101 (MQ=255)

                          cTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGt                                                                       <  1:4051429/101‑1 (MQ=255)

                          cTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGt                                                                       >  2:4052042/1‑101 (MQ=255)

                           ttACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGtt                                                                      <  1:4051478/101‑1 (MQ=255)

                             aCAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGc                                                                    >  1:4052047/1‑101 (MQ=255)

                             aCAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGc                                                                    >  2:4052046/1‑101 (MQ=255)

                               aGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCgg                                                                  <  1:4051366/101‑1 (MQ=255)

                               aGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCgg                                                                  <  2:4051540/101‑1 (MQ=255)

                                gAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTgggg                                                                                         >  2:4052055/1‑77 (MQ=255)

                                gAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCggg                                                                 >  2:4052052/1‑101 (MQ=255)

                                gAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCggg                                                                 <  2:4051503/101‑1 (MQ=255)

                                 aaaCAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGt                                                                >  1:4052057/1‑101 (MQ=255)

                                 aaaCAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGt                                                                <  2:4051379/101‑1 (MQ=255)

                                  aacaacATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTg                                                               >  2:4052061/1‑101 (MQ=255)

                                   acaacaTCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGc                                                              <  1:4051348/101‑1 (MQ=255)

                                   acaacaTCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGc                                                              >  1:4052063/1‑101 (MQ=255)

                                     aacaTCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCg                                                            <  2:4051577/101‑1 (MQ=255)

                                      acaTCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCgg                                                           <  1:4051417/101‑1 (MQ=255)

                                       caTCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCggg                                                          >  1:4052066/1‑101 (MQ=255)

                                             acacTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGt                                                    >  1:4052070/1‑101 (MQ=255)

                                               acTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGc                                                  <  1:4051227/101‑1 (MQ=255)

                                               acTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGc                                                  >  2:4052073/1‑101 (MQ=255)

                                                cTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGcc                                                 >  1:4052076/1‑101 (MQ=255)

                                                  gtgGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCt                                               <  2:4051469/101‑1 (MQ=255)

                                                    ggCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCa                                             <  2:4051463/101‑1 (MQ=255)

                                                     gCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCAc                                            >  2:4052079/1‑101 (MQ=255)

                                                     gCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCAc                                            <  1:4051459/101‑1 (MQ=255)

                                                      cATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTa                                                      >  2:4052082/1‑90 (MQ=255)

                                                      cATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCAcc                                           <  1:4051523/101‑1 (MQ=255)

                                                        ttttATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCt                                         <  1:4051553/101‑1 (MQ=255)

                                                         tttATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTc                                        >  1:4052085/1‑101 (MQ=255)

                                                         tttATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTc                                        >  1:4052083/1‑101 (MQ=255)

                                                          ttATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCg                                       >  2:4052089/1‑101 (MQ=255)

                                                           tATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGc                                      >  1:4052092/1‑101 (MQ=255)

                                                            aTTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCa                                     <  2:4051767/101‑1 (MQ=255)

                                                             ttCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCaa                                    >  2:4052095/1‑101 (MQ=255)

                                                               ccGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATc                                  <  1:4051512/101‑1 (MQ=255)

                                                               ccGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATc                                  <  1:4051692/101‑1 (MQ=255)

                                                                cGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTc                                        >  1:4052098/1‑94 (MQ=255)

                                                                cGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCt                                 <  1:4051494/101‑1 (MQ=255)

                                                                 ggggTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCtt                                <  2:4051779/101‑1 (MQ=255)

                                                                   ggTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCttgt                              <  1:4051596/101‑1 (MQ=255)

                                                                    gTTAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCttgtt                             <  2:4051436/101‑1 (MQ=255)

                                                                     ttAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCttgttg                            <  2:4051516/101‑1 (MQ=255)

                                                                     ttAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCttgttg                            >  1:4052101/1‑101 (MQ=255)

                                                                      tAGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGccc                                                >  2:4052104/1‑80 (MQ=255)

                                                                       aGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCg                                                            >  2:4052108/1‑67 (MQ=255)

                                                                       aGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTggg                          <  1:4051016/101‑1 (MQ=255)

                                                                       aGCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTggg                          >  1:4052105/1‑101 (MQ=255)

                                                                        gCCCTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTgggg                         >  1:4052110/1‑101 (MQ=255)

                                                                          ccTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGAt                       <  1:4051781/101‑1 (MQ=255)

                                                                           cTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATg                      <  1:4051292/101‑1 (MQ=255)

                                                                           cTGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATg                      >  1:4052114/1‑101 (MQ=255)

                                                                            tGAGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGGGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTgggg                         >  2:4052116/1‑97 (MQ=255)

                                                                              aGTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGtt                   <  2:4051574/101‑1 (MQ=255)

                                                                               gTGCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGttt                  <  2:4051711/101‑1 (MQ=255)

                                                                                 gCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTa                <  2:4051245/101‑1 (MQ=255)

                                                                                 gCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTa                <  1:4051649/101‑1 (MQ=255)

                                                                                 gCAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTa                >  1:4052119/1‑101 (MQ=255)

                                                                                  cAGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAg               <  1:4051607/101‑1 (MQ=255)

                                                                                   aGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAgg              <  2:4051970/101‑1 (MQ=255)

                                                                                   aGTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAgg              <  1:4051586/101‑1 (MQ=255)

                                                                                    gTTATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGc             >  1:4052123/1‑101 (MQ=255)

                                                                                     ttATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCa            <  2:4051687/101‑1 (MQ=255)

                                                                                      tATCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCaa           >  2:4052126/1‑101 (MQ=255)

                                                                                       aTCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAac          <  2:4051739/101‑1 (MQ=255)

                                                                                       aTCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAac          >  1:4052127/1‑101 (MQ=255)

                                                                                        tCACCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAaca         <  2:4051397/101‑1 (MQ=255)

                                                                                          aCCGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACAcc       <  2:4051594/101‑1 (MQ=255)

                                                                                           ccGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCa      <  1:4051455/101‑1 (MQ=255)

                                                                                            cGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCAt     <  2:4051444/101‑1 (MQ=255)

                                                                                            cGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCAt     <  2:4051652/101‑1 (MQ=255)

                                                                                            cGGGGTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCAt     <  2:4051835/101‑1 (MQ=255)

                                                                                              gggTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCATCt   >  2:4052132/1‑101 (MQ=255)

                                                                                              gggTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCATCt   <  2:4051635/101‑1 (MQ=255)

                                                                                               ggTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCATCTa  <  1:4051643/101‑1 (MQ=255)

                                                                                               ggTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCATCTa  >  1:4052133/1‑101 (MQ=255)

                                                                                               ggTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCATCTa  <  2:4051492/101‑1 (MQ=255)

                                                                                               ggTCG‑CCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCATCTa  <  2:4051614/101‑1 (MQ=255)

AAGGAGAGGGTTATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCGCCCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCATCTA  >  NC_000913/2249705‑2249901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`