| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,873,031 | IS1 (–) +9 bp | coding (991‑999/1491 nt) | dgcJ → | putative diguanylate cyclase DgcJ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 291401 | NA (NA) | 416 (1.160) | 164/194 | 0.1 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 1873031 = | 0 (0.000) | coding (991/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ | |||||
| * | ? | NC_000913 | = 1873039 | 0 (0.000) | 369 (1.020) | 164/194 | 0.1 | 100% | coding (999/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ |
| ? | NC_000913 | 1978503 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
Only 100 of 783 total aligned reads displayed.
TCGTGTCTCGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGCA > NC_000913/1872931‑1873131 | tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg < 1:3558899‑M2/2‑1 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGa > 2:3373591‑M2/98‑101 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGAt > 1:3373499‑M2/97‑101 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGAt < 2:3558408‑M2/5‑1 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGAt < 2:3558575‑M2/5‑1 (MQ=255) gtCTCGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGAt > 1:1942757/1‑101 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATg < 1:3558021‑M2/6‑1 (MQ=255) ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCAc > 1:3373736‑M2/93‑101 (MQ=255) cGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCAc > 2:1942330/1‑101 (MQ=255) cGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCAc > 2:3372982/1‑101 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACt > 1:3373385‑M2/92‑101 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACt > 2:3373771‑M2/92‑101 (MQ=255) gTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACg > 2:1942866‑M1/1‑100 (MQ=255) ttATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACgg > 2:1942445‑M1/1‑99 (MQ=255) gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACtt > 1:3373915‑M2/91‑101 (MQ=255) tCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaa > 1:3372993‑M1/1‑96 (MQ=255) ccATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaat < 1:3372701‑M1/101‑7 (MQ=255) cATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaa < 2:3372417‑M1/99‑6 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGttt < 2:3558253‑M2/17‑1 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGttt < 1:3558678‑M2/17‑1 (MQ=255) aTTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatga < 2:3372637‑M1/101‑9 (MQ=255) gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATAc < 1:3558610‑M2/21‑1 (MQ=255) atatTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactcc < 2:3372768‑M1/101‑13 (MQ=255) tatTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactcca > 2:3373000‑M1/1‑88 (MQ=255) cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCa < 2:3558801‑M2/23‑1 (MQ=255) atTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaa < 1:3372529‑M1/101‑15 (MQ=255) ttCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaac < 1:3372937‑M1/101‑16 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCaaa > 2:3373684‑M2/77‑101 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCaaa < 1:3558432‑M2/25‑1 (MQ=255) tttactttaTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaactta > 1:3373006‑M1/1‑83 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAAt < 1:3558362‑M2/27‑1 (MQ=255) ttactttaTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttat < 1:3372760‑M1/101‑20 (MQ=255) ttactttaTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttat < 1:3372859‑M1/101‑20 (MQ=255) ctttaTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattga < 1:3372617‑M1/101‑23 (MQ=255) aTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagt > 1:3373018‑M1/1‑75 (MQ=255) tCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtg > 2:3373019‑M1/1‑74 (MQ=255) gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCgaga > 2:3373434‑M2/64‑101 (MQ=255) aCGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgtt < 2:3372594‑M1/101‑30 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGaa > 1:3373625‑M2/63‑101 (MQ=255) agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCgag > 2:3373934‑M2/62‑98 (MQ=255) cTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttat < 1:3372808‑M1/101‑34 (MQ=255) cTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttat > 2:3373029‑M1/1‑68 (MQ=255) ttCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatg < 2:3372857‑M1/101‑35 (MQ=255) ttCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatg > 1:1942239‑M1/1‑67 (MQ=255) cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAata < 1:39719‑M2/43‑1 (MQ=255) cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAata < 2:39818‑M2/43‑1 (MQ=255) tCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgt < 2:3372716‑M1/101‑36 (MQ=255) tCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgt < 1:3372741‑M1/101‑36 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGTGAAAATAtt < 1:39420‑M2/45‑1 (MQ=255) agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTg < 1:39506‑M2/49‑1 (MQ=255) aaaGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagata > 2:1942265‑M1/1‑59 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCaaa > 1:1941394‑M2/50‑74 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATg < 1:39243‑M2/52‑1 (MQ=255) aaGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataa > 1:3373042‑M1/1‑58 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGc < 2:39566‑M2/53‑1 (MQ=255) aGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataat < 2:3372533‑M1/101‑45 (MQ=255) aGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataat < 2:3372791‑M1/101‑45 (MQ=255) aGCGTTCTGTTCTGGATTTTGACGGCGGTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaact > 2:3373044‑M1/1‑57 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGa > 2:3373139‑M2/47‑101 (MQ=255) gttctgttctGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcc > 1:1942334‑M1/1‑54 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGAt < 1:39655‑M2/56‑1 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATga > 2:3373131‑M2/44‑101 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATgac > 1:3373126‑M2/43‑101 (MQ=255) tgttctgGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat < 2:1943008‑M1/101‑52 (MQ=255) tgttctgGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat < 1:1943010‑M1/101‑52 (MQ=255) acaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATgactg < 1:39849‑M2/61‑1 (MQ=255) ttctgGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga > 1:523124‑M1/1‑48 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATgactgg > 2:3373118‑M2/40‑101 (MQ=255) ccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATgactggac > 1:3373108‑M2/38‑101 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATgactggact < 2:39876‑M2/65‑1 (MQ=255) gATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg > 2:523115‑M1/1‑43 (MQ=255) catacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCgaga > 2:3373148‑M2/34‑71 (MQ=255) catacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGta < 1:40163‑M2/68‑1 (MQ=255) tttGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca < 2:1942965‑M1/101‑62 (MQ=255) ttGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat < 1:1942962‑M1/101‑63 (MQ=255) acactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATaa < 2:39623‑M2/71‑1 (MQ=255) acactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATaa > 2:3373100‑M2/31‑101 (MQ=255) tGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg > 1:523109‑M1/1‑38 (MQ=255) cactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAAt < 1:39769‑M2/72‑1 (MQ=255) actaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATc < 1:40034‑M2/73‑1 (MQ=255) actaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATc > 1:3373091‑M2/29‑101 (MQ=255) ctaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCg > 2:3373085‑M2/28‑101 (MQ=255) ggCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc < 1:1942934‑M1/101‑68 (MQ=255) aaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCa < 2:39935‑M2/76‑1 (MQ=255) tcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCaaaa < 2:40109‑M2/79‑1 (MQ=255) tcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCaaaa > 1:3373078‑M2/23‑101 (MQ=255) aaTTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc < 1:1942914‑M1/101‑74 (MQ=255) taagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAAtttt > 2:3373070‑M2/19‑101 (MQ=255) aagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTa < 2:39671‑M2/84‑1 (MQ=255) tttGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat < 2:1942910‑M1/101‑77 (MQ=255) ttGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt > 1:6544488‑M1/1‑24 (MQ=255) gttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAAc > 1:3373064‑M2/16‑101 (MQ=255) tGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt > 2:6543817‑M1/1‑23 (MQ=255) gCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt > 1:6544113‑M1/1‑22 (MQ=255) gcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGaa < 2:39753‑M2/93‑1 (MQ=255) gcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGaa > 2:3373054‑M2/9‑101 (MQ=255) gcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGaa < 1:39913‑M2/93‑1 (MQ=255) gcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGaa < 1:39560‑M2/93‑1 (MQ=255) tatGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac > 2:6544169‑M1/1‑16 (MQ=255) ccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGa < 2:39460‑M2/98‑1 (MQ=255) | TCGTGTCTCGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGCA > NC_000913/1872931‑1873131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |