Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 792,069 A→G intergenic (‑14/+247) galE ← / ← modF UDP‑glucose 4‑epimerase/ABC family protein ModF

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913792,0690AG99.7% 1630.1 / NA 387intergenic (‑14/+247)galE/modFUDP‑glucose 4‑epimerase/ABC family protein ModF
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (168/218);  total (169/218)
Fisher's exact test for biased strand distribution p-value = 4.37e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 392 total aligned reads displayed.

TGATGACATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTT  >  NC_000913/791971‑792166
                                                                                                  |                                                                                                 
tgatgaCATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTggg                                                                                                 <  2:1480554/101‑1 (MQ=255)
tgatgaCATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTggg                                                                                                 <  2:1480653/101‑1 (MQ=255)
   tgaCATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCtt                                                                                              <  2:1480808/101‑1 (MQ=255)
   tgaCATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCtt                                                                                              <  2:1480762/101‑1 (MQ=255)
    gaCATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTa                                                                                             <  1:1480152/101‑1 (MQ=255)
    gaCATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTa                                                                                             >  2:1481216/1‑101 (MQ=255)
    gaCATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTa                                                                                             >  1:1481215/1‑101 (MQ=255)
     aCATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTAt                                                                                            <  1:1480786/101‑1 (MQ=255)
     aCATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTAt                                                                                            >  2:1481220/1‑101 (MQ=255)
      catcatGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATg                                                                                           <  2:1480683/101‑1 (MQ=255)
         catGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTa                                                                                        <  1:1480962/101‑1 (MQ=255)
         catGACCGTTTTGCAGTAATTGCACACAGGAATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTa                                                                                        >  1:1481226/1‑101 (MQ=255)
          atGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTAt                                                                                       <  1:1480714/101‑1 (MQ=255)
            gACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGa                                                                                     >  2:1481232/1‑101 (MQ=255)
            gACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGa                                                                                     <  2:1480485/101‑1 (MQ=255)
             aCCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGaa                                                                                    >  1:1481234/1‑101 (MQ=255)
              ccGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGaaa                                                                                   <  1:1480510/101‑1 (MQ=255)
              ccGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGa                                                                                     <  2:1480379/99‑1 (MQ=255)
                gTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATa                                                                                 >  2:1481239/1‑101 (MQ=255)
                  tttGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAAc                                                                               >  1:1481243/1‑101 (MQ=255)
                     gCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCAt                                                                            <  1:1480760/101‑1 (MQ=255)
                      cAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATa                                                                           >  2:1481247/1‑101 (MQ=255)
                       aGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAg                                                                          >  1:1481250/1‑101 (MQ=255)
                         tAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCa                                                                        <  1:1480600/101‑1 (MQ=255)
                         tAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCa                                                                        >  2:1481253/1‑101 (MQ=255)
                         tAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCa                                                                        <  2:1480446/101‑1 (MQ=255)
                           aTTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATa                                                                      <  2:1480632/101‑1 (MQ=255)
                            ttGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATaa                                                                     >  1:1481260/1‑101 (MQ=255)
                             tGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAAc                                                                    >  2:1481262/1‑101 (MQ=255)
                              gCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACa                                                                   <  1:1480801/101‑1 (MQ=255)
                               cacacaGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACaa                                                                  <  2:1480742/101‑1 (MQ=255)
                                 cacaGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAg                                                                >  2:1481268/1‑101 (MQ=255)
                                 cacaGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAg                                                                <  1:1480855/101‑1 (MQ=255)
                                 cacaGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAg                                                                <  2:1480571/101‑1 (MQ=255)
                                  acaGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGa                                                               <  1:1480903/101‑1 (MQ=255)
                                  acaGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGa                                                               >  1:1481270/1‑101 (MQ=255)
                                   caGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGAt                                                              <  1:1480699/101‑1 (MQ=255)
                                    aGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATg                                                             <  2:1480718/101‑1 (MQ=255)
                                    aGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATg                                                             <  1:1480691/101‑1 (MQ=255)
                                     ggTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGc                                                            <  1:1480707/101‑1 (MQ=255)
                                     ggTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGc                                                            <  1:1480592/101‑1 (MQ=255)
                                       tATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGa                                                          >  1:1481277/1‑101 (MQ=255)
                                        aTGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGaa                                                         >  2:1481280/1‑101 (MQ=255)
                                        aTGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGaa                                                         <  1:1480662/101‑1 (MQ=255)
                                         tGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGaaa                                                        <  1:1480362/101‑1 (MQ=255)
                                          gACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCGTAGCATAACAAAGATGCGaaaa                                                       <  1:1480750/101‑1 (MQ=255)
                                          gACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGaaaa                                                       >  1:1481283/1‑101 (MQ=255)
                                            cTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAgt                                                     <  1:1480918/101‑1 (MQ=255)
                                            cTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAgt                                                     >  2:1481287/1‑101 (MQ=255)
                                             ttCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAgtg                                                    >  1:1481291/1‑101 (MQ=255)
                                               ccAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGtgtg                                                  <  1:1480826/101‑1 (MQ=255)
                                               ccAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGtgtg                                                  >  2:1481296/1‑101 (MQ=255)
                                               ccAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGtgtg                                                  >  2:1481293/1‑101 (MQ=255)
                                               ccAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGtgtg                                                  <  2:1481089/101‑1 (MQ=255)
                                                cAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGa                                                 <  2:1480641/101‑1 (MQ=255)
                                                   tGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACAt                                              >  2:1481302/1‑101 (MQ=255)
                                                    gTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATg                                             <  1:1480924/101‑1 (MQ=255)
                                                    gTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATg                                             >  1:1481304/1‑101 (MQ=255)
                                                        ccGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATg                                             >  2:1481309/1‑97 (MQ=255)
                                                         cGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATa                                        <  2:1480508/101‑1 (MQ=255)
                                                         cGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATa                                        <  2:1480339/101‑1 (MQ=255)
                                                         cGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATa                                        <  1:1481052/101‑1 (MQ=255)
                                                          gCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATaa                                       >  1:1481314/1‑101 (MQ=255)
                                                            tACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAt                                     >  2:1481317/1‑101 (MQ=255)
                                                            tACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAt                                     >  1:1481321/1‑101 (MQ=255)
                                                             accaccGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAAtt                                    <  1:1480580/101‑1 (MQ=255)
                                                              ccaccGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTa                                   <  1:1480558/101‑1 (MQ=255)
                                                              ccaccGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGAATAACAAAGATGCGAAAAGTGTGACATGGAAt                                         >  1:1481327/1‑95 (MQ=255)
                                                               caccGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAg                                  <  1:1480415/101‑1 (MQ=255)
                                                               caccGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAg                                  >  2:1481329/1‑101 (MQ=255)
                                                                accGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGt                                 >  1:1481334/1‑101 (MQ=255)
                                                                 ccGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAAcct                                                                             <  2:1480608/56‑2 (MQ=255)
                                                                  cGGTAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTgg                               >  2:1481338/1‑101 (MQ=255)
                                                                     tAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAAt                            <  2:1480847/101‑1 (MQ=255)
                                                                     tAACCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAAt                            >  2:1481342/1‑101 (MQ=255)
                                                                      aaCCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATc                           >  2:1481347/1‑101 (MQ=255)
                                                                      aaCCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATc                           >  1:1481349/1‑101 (MQ=255)
                                                                       aCCAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCg                          >  2:1481352/1‑101 (MQ=255)
                                                                         cAGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGtt                        <  1:1480884/101‑1 (MQ=255)
                                                                          aGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATgg                                            >  2:1481358/1‑80 (MQ=255)
                                                                          aGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGttt                       <  1:1480464/101‑1 (MQ=255)
                                                                          aGAACTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGttt                       <  2:1480775/101‑1 (MQ=255)
                                                                            aaCTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTac                     <  1:1480687/101‑1 (MQ=255)
                                                                            aaCTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTac                     >  2:1481363/1‑101 (MQ=255)
                                                                            aaCTCTCATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTac                     >  1:1481364/1‑101 (MQ=255)
                                                                               tctcATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTAcaca                  <  2:1480798/101‑1 (MQ=255)
                                                                                ctcATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACaa                 <  1:1480676/101‑1 (MQ=255)
                                                                                 tcATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTAcaca                  <  2:1480696/99‑1 (MQ=255)
                                                                                 tcATAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAg                <  2:1480934/101‑1 (MQ=255)
                                                                                   aTAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGaa              >  1:1481368/1‑101 (MQ=255)
                                                                                    tAATTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAAt             <  1:1480519/101‑1 (MQ=255)
                                                                                     aaTTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAAtt            <  2:1480907/101‑1 (MQ=255)
                                                                                     aaTTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAAtt            >  1:1481375/1‑101 (MQ=255)
                                                                                     aaTTCGCTCCATTGAGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAgag                                                    >  2:1481376/1‑59 (MQ=255)
                                                                                      aTTCGCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAAttt           <  2:1480667/101‑1 (MQ=255)
                                                                                          gCTCCATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGcc       <  2:1480589/101‑1 (MQ=255)
                                                                                              cATTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGttt   <  2:1480970/101‑1 (MQ=255)
                                                                                              cATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTa                                   >  1:1481383/1‑69 (MQ=255)
                                                                                               aTTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGtttt  <  2:1480872/101‑1 (MQ=255)
                                                                                               aTTGGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGtttt  <  2:1480824/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
TGATGACATCATGACCGTTTTGCAGTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTT  >  NC_000913/791971‑792166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: