Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 947,314 T→C V29A (GTT→GCT)  ycaM → putative transporter YcaM

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913947,3140TC87.2% 1056.7 / 124.5 337V29A (GTT→GCT) ycaMputative transporter YcaM
Reads supporting (aligned to +/- strand):  ref base T (17/26);  new base C (131/163);  total (148/189)
Fisher's exact test for biased strand distribution p-value = 6.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 348 total aligned reads displayed.

GAAGGATTTGTCTATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTAATTGTTGGTCA  >  NC_000913/947216‑947410
                                                                                                  |                                                                                                
  aGGATTTGTCTATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACgctgtt                                                                                              >  1:1757737/1‑101 (MQ=255)
   ggATTTGTCTATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTta                                                                                             <  1:1756924/101‑1 (MQ=255)
   ggATTTGTCTATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTta                                                                                             <  1:1756981/101‑1 (MQ=255)
   ggATTTGTCTATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTta                                                                                             >  2:1757738/1‑101 (MQ=255)
    gATTTGTCTATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTtaa                                                                                            >  1:1757742/1‑101 (MQ=255)
    gATTTGTCTATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTtaa                                                                                            <  1:1757172/101‑1 (MQ=255)
          tCTATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTa                                                                                      <  2:1757102/101‑1 (MQ=255)
           cTATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTAt                                                                                     <  1:1757411/101‑1 (MQ=255)
            tATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATg                                                                                    <  2:1757241/101‑1 (MQ=255)
            tATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATg                                                                                    >  1:1757749/1‑101 (MQ=255)
             aTGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGc                                                                                   >  2:1757752/1‑101 (MQ=255)
             aTGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGc                                                                                   <  1:1757242/101‑1 (MQ=255)
                gCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACgttgtt                                                                                              >  1:1757756/1‑87 (MQ=255)
                  tGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAAcc                                                                              <  1:1757433/101‑1 (MQ=255)
                  tGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAAcc                                                                              >  2:1757762/1‑101 (MQ=255)
                  tGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAAcc                                                                              >  1:1757761/1‑101 (MQ=255)
                   gggAATGTTCAGGAAGAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCa                                                                             <  2:1757202/101‑1 (MQ=255)
                   gggAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCa                                                                             <  1:1757097/101‑1 (MQ=255)
                    ggAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAg                                                                            <  1:1757149/101‑1 (MQ=255)
                     gAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAgg                                                                           >  1:1757766/1‑101 (MQ=255)
                     gAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAgg                                                                           <  2:1756811/101‑1 (MQ=255)
                       aTGTTCAGGAAAAACAGTTGCGATGGTACGACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAgggg                                                                         >  1:1757771/1‑101 (MQ=255)
                       aTGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAgggg                                                                         >  2:1757774/1‑101 (MQ=255)
                       aTGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAgggg                                                                         <  2:1756957/101‑1 (MQ=255)
                         gTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCt                                                                       >  2:1757778/1‑101 (MQ=255)
                         gTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCt                                                                       >  1:1757780/1‑101 (MQ=255)
                          ttCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCtg                                                                      <  1:1756900/101‑1 (MQ=255)
                          ttCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCtg                                                                      <  2:1757066/101‑1 (MQ=255)
                           tCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCtgg                                                                     >  2:1757786/1‑101 (MQ=255)
                           tCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCtgg                                                                     <  1:1757376/101‑1 (MQ=255)
                            cAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCtggt                                                                    >  1:1757787/1‑101 (MQ=255)
                             aGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGc                                                                        <  1:1757054/96‑1 (MQ=255)
                              ggAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCtggtgg                                                                  >  1:1757791/1‑101 (MQ=255)
                                aaaaaCAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGgtt                                                                <  1:1757040/101‑1 (MQ=255)
                                aaaaaCAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGgtt                                                                >  2:1757793/1‑101 (MQ=255)
                                   aaCAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGgttgtt                                                             >  2:1757799/1‑101 (MQ=255)
                                    aCAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGttt                                                            >  2:1757802/1‑101 (MQ=255)
                                     cAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGtttt                                                           <  2:1757256/101‑1 (MQ=255)
                                     cAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGtttt                                                           <  1:1757266/101‑1 (MQ=255)
                                     cAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGtttt                                                           <  1:1757117/101‑1 (MQ=255)
                                     cAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGtttt                                                           <  2:1757235/101‑1 (MQ=255)
                                       gTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGtttttt                                                         <  2:1757299/101‑1 (MQ=255)
                                        ttGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTc                                                        <  1:1757158/101‑1 (MQ=255)
                                          gCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCAt                                                      >  2:1757807/1‑101 (MQ=255)
                                           cGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGATAATAACTATGCCAACCAGGGGCTGGTGgttg                                                               >  1:1757811/1‑91 (MQ=255)
                                           cGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATg                                                     >  2:1757810/1‑101 (MQ=255)
                                             aTGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATggg                                                   <  2:1757311/101‑1 (MQ=255)
                                              tGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGgt                                                  >  2:1757815/1‑101 (MQ=255)
                                              tGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGgt                                                  <  1:1757327/101‑1 (MQ=255)
                                                gTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGgtgt                                                <  2:1757330/101‑1 (MQ=255)
                                                  acaacaTTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGttt                                              >  1:1757820/1‑101 (MQ=255)
                                                  acaacaTTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGttt                                              <  1:1757285/101‑1 (MQ=255)
                                                  acaacaTTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGttt                                              >  2:1757821/1‑101 (MQ=255)
                                                    aacaTTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTAt                                            >  1:1757828/1‑101 (MQ=255)
                                                    aacaTTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTAt                                            <  2:1757689/101‑1 (MQ=255)
                                                    aacaTTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTAt                                            >  2:1757829/1‑101 (MQ=255)
                                                    aacaTTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTAt                                            <  2:1757275/101‑1 (MQ=255)
                                                    aacaTTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTAt                                            <  1:1757578/101‑1 (MQ=255)
                                                    aacaTTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTAt                                            <  2:1757403/101‑1 (MQ=255)
                                                       aTTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCtt                                         >  2:1757833/1‑101 (MQ=255)
                                                         tGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTg                                       <  2:1757074/101‑1 (MQ=255)
                                                          gcgcTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGc                                      >  1:1757836/1‑101 (MQ=255)
                                                           cgcTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCa                                     <  2:1757179/101‑1 (MQ=255)
                                                            gcTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCAc                                    <  2:1757380/101‑1 (MQ=255)
                                                              tGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCActc                                  <  2:1757573/101‑1 (MQ=255)
                                                              tGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCActc                                  >  2:1757841/1‑101 (MQ=255)
                                                                aTGTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTa                                <  1:1757456/101‑1 (MQ=255)
                                                                  gTCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTAtt                              <  1:1757189/101‑1 (MQ=255)
                                                                   tCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTAttt                             <  2:1757387/101‑1 (MQ=255)
                                                                   tCTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTAttt                             <  1:1757221/101‑1 (MQ=255)
                                                                    cTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTc                            >  2:1757845/1‑101 (MQ=255)
                                                                    cTTTTATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTc                            <  1:1757296/101‑1 (MQ=255)
                                                                      tttATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTcac                          >  1:1757848/1‑101 (MQ=255)
                                                                      tttATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTcac                          <  1:1757023/101‑1 (MQ=255)
                                                                       ttATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTcaca                         >  2:1757852/1‑101 (MQ=255)
                                                                        tATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCacac                        >  2:1757855/1‑101 (MQ=255)
                                                                        tATCACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCacac                        <  2:1757447/101‑1 (MQ=255)
                                                                         aTCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACAcc                       >  1:1757856/1‑101 (MQ=255)
                                                                           cACTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCtt                     <  2:1756753/101‑1 (MQ=255)
                                                                            aCTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTa                    <  2:1757363/101‑1 (MQ=255)
                                                                            aCTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTa                    <  1:1757665/101‑1 (MQ=255)
                                                                             cTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTAt                   <  1:1757307/101‑1 (MQ=255)
                                                                             cTGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGCTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTAt                   >  2:1757862/1‑101 (MQ=255)
                                                                              tGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATg                  >  1:1757867/1‑101 (MQ=255)
                                                                              tGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATg                  <  2:1757350/101‑1 (MQ=255)
                                                                              tGTCTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATg                  >  2:1757865/1‑101 (MQ=255)
                                                                                 cTGGGGTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATgcgc               >  1:1757870/1‑101 (MQ=255)
                                                                                  tGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCt              <  1:1757213/101‑1 (MQ=255)
                                                                                   ggggTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTa             <  2:1757601/101‑1 (MQ=255)
                                                                                    gggTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATg                  <  2:1757426/95‑1 (MQ=255)
                                                                                    gggTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTaa            >  2:1757876/1‑101 (MQ=255)
                                                                                    gggTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTaa            <  1:1757353/101‑1 (MQ=255)
                                                                                     ggTTTTGGCAAGGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTAt                   >  1:1757879/1‑93 (MQ=255)
                                                                                     ggTTTTGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTAAt           <  2:1757131/101‑1 (MQ=255)
                                                                                         ttGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCTCTCTATTTCACACCTTATGCGCTAAttgtt       <  1:1757504/101‑1 (MQ=255)
                                                                                         ttGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTAAttgtt       >  1:1757884/1‑101 (MQ=255)
                                                                                         ttGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTAAttgtt       >  2:1757882/1‑101 (MQ=255)
                                                                                          tGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTAAttgttg      <  2:1757513/101‑1 (MQ=255)
                                                                                          tGGCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTAAttgttg      <  2:1757470/101‑1 (MQ=255)
                                                                                            gCAACGCTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTAATTGTTGGt    <  2:1757344/101‑1 (MQ=255)
                                                                                                  |                                                                                                
GAAGGATTTGTCTATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTAATTGTTGGTCA  >  NC_000913/947216‑947410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: