| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,196,735 | A→G | intergenic (+362/+132) | icd → / ← ymfD | isocitrate dehydrogenase/e14 prophage; putative SAM‑dependent methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,196,735 | 0 | A | G | 99.7% | 1438.5 / NA | 347 | intergenic (+362/+132) | icd/ymfD | isocitrate dehydrogenase/e14 prophage; putative SAM‑dependent methyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (225/121); minor base C (1/0); total (226/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 349 total aligned reads displayed.
GTTATTAGGACAATTATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGACAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCACATACATCTTTAGTA > NC_000913/1196637‑1196832 | gTTATTAGGACAATTATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCa > 2:2201869/1‑101 (MQ=255) attaGGACAATTATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGcc > 1:2201873/1‑101 (MQ=255) ttaGGACAATTATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCa < 2:2201249/101‑1 (MQ=255) ttaGGACAATTATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCa > 2:2201875/1‑101 (MQ=255) aGGACAATTATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTATATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAAc > 2:2201880/1‑101 (MQ=255) aCAATTATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAgg > 2:2201884/1‑101 (MQ=255) cAATTATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGc > 1:2201886/1‑101 (MQ=255) aTTATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCAt > 1:2201893/1‑101 (MQ=255) ttATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCAtt > 2:2201896/1‑101 (MQ=255) tATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTg > 1:2201899/1‑101 (MQ=255) aTGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTgg < 2:2201386/101‑1 (MQ=255) aTGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTgg > 1:2201904/1‑101 (MQ=255) tGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTggg < 1:2201137/101‑1 (MQ=255) tGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTggg > 2:2201906/1‑101 (MQ=255) ttACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCa > 1:2201917/1‑101 (MQ=255) ttACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCa > 1:2201914/1‑101 (MQ=255) ttACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCa > 2:2201919/1‑101 (MQ=255) aCTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCAc > 1:2201928/1‑101 (MQ=255) aCTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCAc > 2:2201923/1‑101 (MQ=255) tCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCt > 2:2201930/1‑101 (MQ=255) tCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCt < 2:2201484/101‑1 (MQ=255) ccTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCtt > 1:2201933/1‑101 (MQ=255) cTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTa > 1:2201941/1‑101 (MQ=255) cTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTa > 2:2201936/1‑101 (MQ=255) ttACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCaa > 1:2201945/1‑92 (MQ=255) ttACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAg < 1:2201042/101‑1 (MQ=255) tACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGc > 2:2201948/1‑101 (MQ=255) tACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGc < 2:2201176/101‑1 (MQ=255) acacCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCg < 2:2201241/101‑1 (MQ=255) acacCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCg > 1:2201952/1‑101 (MQ=255) cacCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGt < 2:2201424/101‑1 (MQ=255) acCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGtt > 1:2201956/1‑101 (MQ=255) acCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGtt > 2:2201957/1‑101 (MQ=255) ccGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCa < 1:2200918/101‑1 (MQ=255) gCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAgg > 1:2201963/1‑101 (MQ=255) cTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGt < 1:2201335/101‑1 (MQ=255) tCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTa > 1:2201969/1‑101 (MQ=255) tCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTa > 2:2201968/1‑101 (MQ=255) aaTATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACAt > 2:2201973/1‑101 (MQ=255) atTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCg > 2:2201979/1‑101 (MQ=255) ttGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCgg < 2:2201303/101‑1 (MQ=255) tGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGa > 2:2201982/1‑101 (MQ=255) tGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGa > 1:2201983/1‑101 (MQ=255) ttAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAAt < 1:2201427/101‑1 (MQ=255) ttAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAAt > 1:2201989/1‑101 (MQ=255) ttAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAAt < 2:2201082/101‑1 (MQ=255) tAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATg > 2:2201991/1‑101 (MQ=255) aaTTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCa > 1:2201997/1‑84 (MQ=255) aaTTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTa < 1:2201500/101‑1 (MQ=255) aaTTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTa > 2:2201996/1‑101 (MQ=255) aaTTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTa < 1:2201256/101‑1 (MQ=255) aaTTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTa < 1:2201474/101‑1 (MQ=255) aTTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTaa < 1:2201350/101‑1 (MQ=255) aTTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTaa > 1:2202000/1‑101 (MQ=255) gCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTaaaaa < 2:2201354/101‑1 (MQ=255) gCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTaaaaa > 2:2202008/1‑101 (MQ=255) gCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTaaaaa > 1:2202007/1‑101 (MQ=255) ccGGTTTTGTATCAACTACTCCCCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTa < 1:2201233/72‑1 (MQ=255) ccGGTTTTGTATCAACTACTCCCCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTaaaaaa < 2:2201444/101‑1 (MQ=255) ccGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTaaaaaa > 1:2202014/1‑101 (MQ=255) ccGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTaaaaaa > 2:2202013/1‑101 (MQ=255) cGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAg < 1:2201193/101‑1 (MQ=255) ggTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAgg > 1:2202020/1‑101 (MQ=255) ggTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAgg > 2:2202022/1‑101 (MQ=255) gTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGc > 1:2202025/1‑101 (MQ=255) ttttGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTg < 1:2201311/53‑1 (MQ=255) ttttGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTaaaaaa > 2:2202029/1‑97 (MQ=255) ttttGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGcc < 1:2201361/101‑1 (MQ=255) tttGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTaaaaa > 1:2202033/1‑95 (MQ=255) ttGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCcgc < 1:2201327/101‑1 (MQ=255) ttGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCcgc < 2:2201409/101‑1 (MQ=255) tGTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGcc > 1:2202038/1‑98 (MQ=255) gTATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGa < 2:2201555/101‑1 (MQ=255) tATCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAg > 2:2202039/1‑101 (MQ=255) aTCAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGa > 2:2202044/1‑99 (MQ=255) cAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAgcgc < 2:2201272/101‑1 (MQ=255) cAACTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAgcgc < 1:2201622/101‑1 (MQ=255) aaCTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGcgcg > 2:2202051/1‑101 (MQ=255) aaCTACTCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGcgcg > 1:2202049/1‑101 (MQ=255) actactCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCgg < 2:2201160/101‑1 (MQ=255) actactCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCgg < 2:2201459/101‑1 (MQ=255) ctactCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGc > 2:2202055/1‑101 (MQ=255) tactCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGcc > 1:2202059/1‑101 (MQ=255) actCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGccc > 2:2202061/1‑101 (MQ=255) tCACCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCt > 2:2202066/1‑101 (MQ=255) aCCCGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTc > 1:2202069/1‑101 (MQ=255) cccGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTca > 2:2202074/1‑101 (MQ=255) cccGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTca < 2:2201522/101‑1 (MQ=255) cccGGGACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTca > 1:2202073/1‑101 (MQ=255) gggACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCacat < 2:2201628/101‑1 (MQ=255) ggACTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCacata > 2:2202080/1‑101 (MQ=255) aCTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCacataca > 1:2202082/1‑101 (MQ=255) aCTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCacataca < 1:2201284/101‑1 (MQ=255) cTCGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCacatacat < 1:2201411/101‑1 (MQ=255) cGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCACATACATCt > 2:2202087/1‑101 (MQ=255) cGCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCACATACATCt > 1:2202088/1‑101 (MQ=255) gCCAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCACATACATCtt > 2:2202093/1‑101 (MQ=255) ccAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCACATACATCttt > 1:2202095/1‑101 (MQ=255) cAGGGGGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCACATACATCTTTa < 1:2201171/101‑1 (MQ=255) ggggGCAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCACATACATCTTTAGt > 1:2202101/1‑101 (MQ=255) | GTTATTAGGACAATTATGAATTACCACTCCTTACACCCGCTCAAATATTGTTAAATTGCCGGTTTTGTATCAACTACTCACCCGGGACTCGCCAGGGGACAGCCAACAGGCATTGGGTGCAATCACCTTAGCGTTCAGGTACATGCGGAATGTAAAAAAGGCCGCGAGCGCGGCCCCTTCACATACATCTTTAGTA > NC_000913/1196637‑1196832 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |