BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,202,190	A→G	intergenic (‑106/+69)	ymfJ ← / ← ymfK	e14 prophage; protein YmfJ/e14 prophage; putative repressor protein YmfK

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,202,190	0	A	G	100.0%	1487.6 / NA	365	intergenic (‑106/+69)	ymfJ/ymfK	e14 prophage; protein YmfJ/e14 prophage; putative repressor protein YmfK
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (160/205); total (160/205)

Only 100 of 365 total aligned reads displayed.

CTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTT  >  NC_000913/1202092‑1202287

ctcCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCa                                                                                                 <  1:2212763/101‑1 (MQ=255)

ctcCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCa                                                                                                 >  2:2213169/1‑101 (MQ=255)

ctcCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCa                                                                                                 >  1:2213170/1‑101 (MQ=255)

  ccACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCAtt                                                                                               <  1:2212198/101‑1 (MQ=255)

  ccACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCAtt                                                                                               >  2:2213177/1‑101 (MQ=255)

   cACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTa                                                                                              >  1:2213179/1‑101 (MQ=255)

    aCTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTAt                                                                                             <  2:2212551/101‑1 (MQ=255)

     cTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATg                                                                                            <  1:2212571/101‑1 (MQ=255)

     cTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATg                                                                                            >  1:2213184/1‑101 (MQ=255)

         aaTCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTAtc                                                                                        >  1:2213188/1‑101 (MQ=255)

          atcatcCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTAtct                                                                                       <  1:2212317/101‑1 (MQ=255)

            catcCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCa                                                                                     >  1:2213195/1‑101 (MQ=255)

            catcCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCa                                                                                     >  2:2213193/1‑101 (MQ=255)

            catcCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCa                                                                                     <  2:2212693/101‑1 (MQ=255)

             atcCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCaa                                                                                    >  1:2213198/1‑101 (MQ=255)

              tcCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCaaa                                                                                   <  1:2212514/101‑1 (MQ=255)

              tcCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCaaa                                                                                   <  2:2212540/101‑1 (MQ=255)

              tcCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCaaa                                                                                   >  2:2213203/1‑101 (MQ=255)

               ccGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAg                                                                                  >  2:2213207/1‑101 (MQ=255)

                cGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAgg                                                                                 <  2:2212473/101‑1 (MQ=255)

                   tAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTAc                                                                              >  1:2213212/1‑101 (MQ=255)

                     aCGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACAt                                                                            <  1:2212837/101‑1 (MQ=255)

                      cGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACAtt                                                                           >  2:2213215/1‑101 (MQ=255)

                      cGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACAtt                                                                           <  1:2212670/101‑1 (MQ=255)

                       gAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTg                                                                          >  2:2213219/1‑101 (MQ=255)

                        aaTCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGt                                                                         <  2:2212933/101‑1 (MQ=255)

                         atcatcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTc                                                                        <  1:2212718/101‑1 (MQ=255)

                          tcatcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCa                                                                       >  2:2213224/1‑101 (MQ=255)

                          tcatcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCa                                                                       <  2:2212502/101‑1 (MQ=255)

                            atcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAg                                                                     <  1:2212612/101‑1 (MQ=255)

                            atcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAg                                                                     >  1:2213228/1‑101 (MQ=255)

                             tcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGt                                                                    <  1:2212727/101‑1 (MQ=255)

                             tcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGt                                                                    <  1:2212433/101‑1 (MQ=255)

                             tcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGt                                                                    >  2:2213230/1‑101 (MQ=255)

                                 ggTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATaa                                                                <  2:2212274/101‑1 (MQ=255)

                                 ggTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATaa                                                                >  2:2213234/1‑101 (MQ=255)

                                    cTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATaaaaa                                                             <  2:2212799/101‑1 (MQ=255)

                                    cTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATaaaaa                                                             >  2:2213239/1‑101 (MQ=255)

                                        gtacgtacCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAAcc                                                         >  1:2213242/1‑101 (MQ=255)

                                         tacgtacCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCt                                                        >  1:2213246/1‑101 (MQ=255)

                                           cgtacCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGc                                                      >  2:2213249/1‑101 (MQ=255)

                                            gtacCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGcc                                                     <  1:2212652/101‑1 (MQ=255)

                                            gtacCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGcc                                                     <  1:2212773/101‑1 (MQ=255)

                                             tacCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTg                                                       <  1:2212691/98‑1 (MQ=255)

                                             tacCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCg                                                    <  2:2212419/101‑1 (MQ=255)

                                               ccGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAAcc                                                         <  2:2212615/94‑1 (MQ=255)

                                                 gggcgggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGc                                                >  1:2213256/1‑101 (MQ=255)

                                                 gggcgggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGc                                                >  2:2213255/1‑101 (MQ=255)

                                                 gggcgggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGc                                                <  2:2212577/101‑1 (MQ=255)

                                                  ggcgggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCa                                               <  1:2212859/101‑1 (MQ=255)

                                                   gcgggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAg                                              <  1:2212583/101‑1 (MQ=255)

                                                    cgggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAgg                                             >  1:2213261/1‑101 (MQ=255)

                                                     ggggTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTa                                                                                              <  2:2212641/51‑1 (MQ=255)

                                                     gggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGt                                            >  2:2213264/1‑101 (MQ=255)

                                                      ggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGtt                                           <  2:2212521/101‑1 (MQ=255)

                                                       gcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTc                                          <  2:2212712/101‑1 (MQ=255)

                                                           cTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATaa                                      <  1:2212528/101‑1 (MQ=255)

                                                            ttCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAg                                                 <  1:2212930/89‑1 (MQ=255)

                                                            ttCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATaaa                                     >  2:2213271/1‑101 (MQ=255)

                                                            ttCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATaaa                                     >  1:2213270/1‑101 (MQ=255)

                                                             tCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAAc                                    <  1:2213022/101‑1 (MQ=255)

                                                                tGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACAtt                                 >  1:2213277/1‑101 (MQ=255)

                                                                tGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACAtt                                 >  2:2213278/1‑101 (MQ=255)

                                                                 gggCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTg                                >  1:2213281/1‑101 (MQ=255)

                                                                 gggCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTg                                <  2:2212658/101‑1 (MQ=255)

                                                                  ggCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGa                               <  2:2212725/101‑1 (MQ=255)

                                                                   gCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGAt                              <  1:2212982/101‑1 (MQ=255)

                                                                     gTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTAt                                                                                             <  1:2212063/36‑1 (MQ=255)

                                                                     gTCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTa                            >  2:2213286/1‑101 (MQ=255)

                                                                      tCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAg                           <  2:2212743/101‑1 (MQ=255)

                                                                      tCCTGCCTGTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAg                           <  2:2212653/101‑1 (MQ=255)

                                                                         tgcctgTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCt                        >  2:2213293/1‑101 (MQ=255)

                                                                         tgcctgTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCt                        <  2:2212358/101‑1 (MQ=255)

                                                                           cctgTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCttt                      <  2:2212751/101‑1 (MQ=255)

                                                                           cctgTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCttt                      >  1:2213295/1‑101 (MQ=255)

                                                                           cctgTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCttt                      <  2:2212892/101‑1 (MQ=255)

                                                                            ctgTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCttt                      <  2:2212665/100‑1 (MQ=255)

                                                                            ctgTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTg                     <  1:2212790/101‑1 (MQ=255)

                                                                            ctgTTTGTTGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTg                     >  2:2213297/1‑101 (MQ=255)

                                                                             tgtttgttGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGa                    <  1:2212824/101‑1 (MQ=255)

                                                                               tttgttGTTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGAtt                  >  1:2213302/1‑101 (MQ=255)

                                                                                 tgttgtTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGAtttt                >  2:2213305/1‑101 (MQ=255)

                                                                                 tgttgtTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGAtttt                <  2:2212860/101‑1 (MQ=255)

                                                                                 tgttgtTTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGAtttt                <  1:2212741/101‑1 (MQ=255)

                                                                                   ttgttTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGt              <  2:2212805/101‑1 (MQ=255)

                                                                                    tgttTCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTa             <  2:2212604/101‑1 (MQ=255)

                                                                                      tttCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGTTTTTGTAt            >  2:2213310/1‑100 (MQ=255)

                                                                                      tttCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtc           <  1:2212481/101‑1 (MQ=255)

                                                                                       ttCTCTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtct          >  1:2213314/1‑101 (MQ=255)

                                                                                        tctcTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtctt         >  2:2213318/1‑101 (MQ=255)

                                                                                        tctcTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtctt         >  1:2213319/1‑101 (MQ=255)

                                                                                        tctcTTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtctt         <  1:2212886/101‑1 (MQ=255)

                                                                                          tctTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtcttct       >  1:2213323/1‑101 (MQ=255)

                                                                                          tctTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtcttct       <  2:2212815/101‑1 (MQ=255)

                                                                                          tctTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtcttct       <  2:2212703/101‑1 (MQ=255)

                                                                                          tctTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtcttct       <  2:2212630/101‑1 (MQ=255)

                                                                                           ctTGGGTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATcttctt      >  2:2213327/1‑101 (MQ=255)

                                                                                              gggTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGt   >  1:2213331/1‑101 (MQ=255)

                                                                                               ggTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGtt  <  1:2212258/101‑1 (MQ=255)

                                                                                               ggTGCATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGtt  <  2:2212567/101‑1 (MQ=255)

CTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTCAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTT  >  NC_000913/1202092‑1202287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`