BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,957,350	T→C	E261E (GAA→GAG)	torY ←	cytochrome c quinol dehydrogenase TorY

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,957,350	0	T	C	100.0%	1333.0 / NA	319	E261E (GAA→GAG)	torY	cytochrome c quinol dehydrogenase TorY
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (159/160); total (159/160)

Only 100 of 329 total aligned reads displayed.

GCGGGATCGGTAAGCGCACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCG  >  NC_000913/1957252‑1957447

 cGGGATCGGTAAGCGCACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACcctct                                                                                                >  1:3520717/1‑101 (MQ=255)

  gggATCGGTAAGCGCACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACcctctt                                                                                               >  1:3520721/1‑101 (MQ=255)

  gggATCGGTAAGCGCACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACcctctt                                                                                               <  1:3520288/101‑1 (MQ=255)

    gATCGGTAAGCGCACCCTGTAAAGACGCTTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCa                                                                                             >  2:3520723/1‑101 (MQ=255)

     aTCGGTAAGCGCACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCAc                                                                                            >  2:3520727/1‑101 (MQ=255)

      tCGGTAAGCGCACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACt                                                                                           <  1:3520030/101‑1 (MQ=255)

        ggTAAGCGCACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTa                                                                                         >  1:3520731/1‑101 (MQ=255)

          tAAGCGCACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAAt                                                                                       <  2:3520182/101‑1 (MQ=255)

          tAAGCGCACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAAt                                                                                       >  2:3520733/1‑101 (MQ=255)

            aGCGCACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAAtgt                                                                                     >  1:3520737/1‑101 (MQ=255)

             gcgcACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAAtgtg                                                                                    >  2:3520738/1‑101 (MQ=255)

               gcACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGc                                                                                  >  1:3520743/1‑101 (MQ=255)

                cACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCAc                                                                                            <  2:3520002/90‑1 (MQ=255)

                  cccTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTa                                                                                <  2:3520372/100‑1 (MQ=255)

                  cccTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAg                                                                               <  2:3520237/101‑1 (MQ=255)

                  cccTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAg                                                                               >  2:3520747/1‑101 (MQ=255)

                   ccTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTa                                                                                <  2:3520205/99‑1 (MQ=255)

                   ccTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTAAAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAgc                                                                              <  1:3520103/101‑1 (MQ=255)

                    cTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTa                                                                                <  1:3520264/98‑1 (MQ=255)

                    cTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAgcg                                                                             <  2:3520339/101‑1 (MQ=255)

                      gTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTgg                                                                                   <  1:3520072/93‑1 (MQ=255)

                      gTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGcc                                                                           >  2:3520751/1‑101 (MQ=255)

                       tAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCa                                                                          >  1:3520752/1‑101 (MQ=255)

                        aaaGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAg                                                                         >  1:3520757/1‑101 (MQ=255)

                         aaGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGc                                                                        >  2:3520759/1‑101 (MQ=255)

                             cGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGtt                                                                    <  2:3520121/101‑1 (MQ=255)

                             cGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGtt                                                                    >  1:3520763/1‑101 (MQ=255)

                             cGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGtt                                                                    <  2:3520390/101‑1 (MQ=255)

                                cTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGAc                                                                 >  2:3520768/1‑101 (MQ=255)

                                 tGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGAcc                                                                >  1:3520769/1‑101 (MQ=255)

                                  gACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCt                                                               <  2:3520324/101‑1 (MQ=255)

                                   aCGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTg                                                              <  1:3520329/101‑1 (MQ=255)

                                   aCGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTg                                                              >  2:3520772/1‑101 (MQ=255)

                                    cGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAg                                                                         <  1:3520448/89‑1 (MQ=255)

                                      ccATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTgccg                                                           >  1:3520778/1‑101 (MQ=255)

                                      ccATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTgccg                                                           <  1:3520374/101‑1 (MQ=255)

                                       cATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTgccgc                                                          >  2:3520779/1‑101 (MQ=255)

                                        attgattgCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTgccgcc                                                         >  2:3520784/1‑101 (MQ=255)

                                          tgattgCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAg                                                       >  1:3520786/1‑101 (MQ=255)

                                             ttgCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTa                                                    <  1:3520168/101‑1 (MQ=255)

                                              tgCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTag                                                   <  1:3520319/101‑1 (MQ=255)

                                                ccGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTagag                                                 >  1:3520792/1‑101 (MQ=255)

                                                ccGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTagag                                                 <  2:3520273/101‑1 (MQ=255)

                                                 cGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACATAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGc                                                <  1:3520274/101‑1 (MQ=255)

                                                  gTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCg                                               >  1:3520797/1‑101 (MQ=255)

                                                  gTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCg                                               >  2:3520798/1‑101 (MQ=255)

                                                  gTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCg                                               <  2:3519917/101‑1 (MQ=255)

                                                    aTTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAgg                                                      >  2:3520805/1‑92 (MQ=255)

                                                    aTTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCgtg                                             >  1:3520802/1‑101 (MQ=255)

                                                     ttCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCgtgt                                            <  2:3520218/101‑1 (MQ=255)

                                                       cGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGttt                                          >  1:3520807/1‑101 (MQ=255)

                                                        gTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGtttt                                         <  1:3520249/101‑1 (MQ=255)

                                                         tCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATCCCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCa                                                        <  1:3520179/85‑1 (MQ=255)

                                                         tCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTc                                        <  2:3520032/101‑1 (MQ=255)

                                                         tCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTc                                        <  1:3520148/101‑1 (MQ=255)

                                                          cAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATCCCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGc                                                <  2:3520067/92‑1 (MQ=255)

                                                          cAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCt                                                               <  2:3520141/77‑1 (MQ=255)

                                                          cAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCa                                       >  2:3520812/1‑101 (MQ=255)

                                                          cAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCa                                       >  1:3520813/1‑101 (MQ=255)

                                                          cAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCa                                       <  1:3519724/101‑1 (MQ=255)

                                                           aGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCAc                                      >  2:3520820/1‑101 (MQ=255)

                                                           aGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCAc                                      >  1:3520821/1‑101 (MQ=255)

                                                            gCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACt                                     <  1:3520389/101‑1 (MQ=255)

                                                             ccTGCCATTCCCCGTTTACAGTGAGCGCCTTGATGCCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTg                                    <  1:3520352/101‑1 (MQ=255)

                                                              cTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTga                                   <  1:3520438/101‑2 (MQ=255)

                                                              cTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGc                                   >  2:3520826/1‑101 (MQ=255)

                                                               tGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGcc                                  >  1:3520827/1‑101 (MQ=255)

                                                                 ccATTCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCt                                >  1:3520830/1‑101 (MQ=255)

                                                                    ttCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGc                                                                        <  1:3520195/58‑1 (MQ=255)

                                                                    ttCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCa                             <  2:3520296/101‑1 (MQ=255)

                                                                     tCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTa                                                    <  2:3520228/77‑1 (MQ=255)

                                                                     tCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCAt                            <  1:3520157/101‑1 (MQ=255)

                                                                     tCCCCGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCAt                            >  2:3520834/1‑101 (MQ=255)

                                                                       cccGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCAttt                          >  2:3520837/1‑101 (MQ=255)

                                                                        ccGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTg                         <  2:3520306/101‑1 (MQ=255)

                                                                        ccGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTg                         <  2:3520257/101‑1 (MQ=255)

                                                                         cGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGa                        <  1:3520214/101‑1 (MQ=255)

                                                                         cGTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGa                        >  1:3520841/1‑101 (MQ=255)

                                                                          gTTTACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGAt                       >  2:3520846/1‑101 (MQ=255)

                                                                           tttACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATa                      <  2:3520516/101‑1 (MQ=255)

                                                                           tttACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATa                      <  1:3520208/101‑1 (MQ=255)

                                                                            ttACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATaa                     >  2:3520849/1‑101 (MQ=255)

                                                                            ttACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATaa                     >  1:3520850/1‑101 (MQ=255)

                                                                             tACAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAAc                    >  1:3520854/1‑101 (MQ=255)

                                                                              aCAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAAcc                   <  2:3520602/101‑1 (MQ=255)

                                                                              aCAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAAcc                   <  2:3520414/101‑1 (MQ=255)

                                                                               cAGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGAt                       >  1:3520858/1‑96 (MQ=255)

                                                                                aGTGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCt                 >  2:3520859/1‑101 (MQ=255)

                                                                                  tGAGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGc               <  2:3520402/101‑1 (MQ=255)

                                                                                    aGCGCCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCaa             <  2:3520384/101‑1 (MQ=255)

                                                                                     gcgcCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAAc            <  1:3520338/101‑1 (MQ=255)

                                                                                       gcCTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAg          >  1:3520866/1‑101 (MQ=255)

                                                                                        ccTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGa         >  2:3520868/1‑101 (MQ=255)

                                                                                         cTTGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGaa        >  1:3520871/1‑101 (MQ=255)

                                                                                          ttGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAAc       <  1:3520239/101‑1 (MQ=255)

                                                                                          ttGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAAc       >  2:3520874/1‑101 (MQ=255)

                                                                                           tGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACg      >  1:3520876/1‑101 (MQ=255)

                                                                                           tGATACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACg      <  1:3520611/101‑1 (MQ=255)

                                                                                             aTACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGccc                                 <  1:3520300/72‑1 (MQ=255)

                                                                                              tACCCTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATc   >  2:3520880/1‑101 (MQ=255)

GCGGGATCGGTAAGCGCACCCTGTAAAGACGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCG  >  NC_000913/1957252‑1957447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`