Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,111,263 G→A G238G (GGC→GGT rfbD ← dTDP‑4‑dehydrorhamnose reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,111,2630GA100.0% 1358.7 / NA 327G238G (GGC→GGTrfbDdTDP‑4‑dehydrorhamnose reductase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (161/166);  total (161/166)

Only 100 of 327 total aligned reads displayed.

AATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATGCCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGACATCCGGTT  >  NC_000913/2111165‑2111360
                                                                                                  |                                                                                                 
 aTTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCt                                                                                                <  1:3801313/101‑1 (MQ=255)
 aTTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCt                                                                                                >  1:3802024/1‑101 (MQ=255)
  tttttCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTg                                                                                               >  2:3802026/1‑101 (MQ=255)
   ttttCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGc                                                                                              >  2:3802030/1‑101 (MQ=255)
    tttCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCt                                                                                             >  1:3802032/1‑101 (MQ=255)
      tCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCttt                                                                                           <  2:3801541/101‑1 (MQ=255)
      tCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCttt                                                                                           <  2:3801421/101‑1 (MQ=255)
       cTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTg                                                                                          >  2:3802037/1‑101 (MQ=255)
       cTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTg                                                                                          >  2:3802041/1‑101 (MQ=255)
        tGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTgc                                                                                         >  1:3802043/1‑101 (MQ=255)
          tATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTgcgc                                                                                       <  1:3801509/101‑1 (MQ=255)
            ttAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTgcgcgc                                                                                     >  2:3802047/1‑101 (MQ=255)
            ttAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTgcgcgc                                                                                     <  2:3801093/101‑1 (MQ=255)
            ttAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTgcgcgc                                                                                     <  1:3801712/101‑1 (MQ=255)
             tAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGcc                                                                                    >  1:3802051/1‑101 (MQ=255)
              aaGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCct                                                                                   <  1:3801603/101‑1 (MQ=255)
               aGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCctc                                                                                  >  2:3802054/1‑101 (MQ=255)
               aGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCctc                                                                                  <  1:3801386/101‑1 (MQ=255)
               aGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCctc                                                                                  <  1:3801366/101‑1 (MQ=255)
               aGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCctc                                                                                  <  1:3801701/101‑1 (MQ=255)
                 gCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCtt                                                                                <  1:3800941/101‑1 (MQ=255)
                   gagaGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCa                                                                              <  2:3801531/101‑1 (MQ=255)
                   gagaGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCa                                                                              >  1:3802058/1‑101 (MQ=255)
                    agagTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCaa                                                                             >  2:3802060/1‑101 (MQ=255)
                     gagTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCaaa                                                                            >  1:3802064/1‑101 (MQ=255)
                      agctATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCaaaa                                                                           >  2:3802067/4‑101 (MQ=255)
                      agTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCaaaa                                                                           <  1:3801452/101‑1 (MQ=255)
                        ttATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAAc                                                                         <  1:3801578/101‑1 (MQ=255)
                         tATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAAcc                                                                        >  2:3802075/1‑101 (MQ=255)
                         tATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAAcc                                                                        <  2:3801362/101‑1 (MQ=255)
                         tATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAAcc                                                                        >  1:3802076/1‑101 (MQ=255)
                         tATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAAcc                                                                        >  1:3802072/1‑101 (MQ=255)
                            gtgGACGACGAGCTGGGGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAgc                                                                     >  2:3802083/1‑101 (MQ=255)
                             tgGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAgcg                                                                    <  2:3801646/101‑1 (MQ=255)
                             tgGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAgcg                                                                    >  1:3802085/1‑101 (MQ=255)
                             tgGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAgcg                                                                    <  2:3801401/101‑1 (MQ=255)
                              ggACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAgcgc                                                                   <  1:3801442/101‑1 (MQ=255)
                               gacgacGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCgca                                                                  >  1:3802090/1‑101 (MQ=255)
                                 cgacgaGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCgcagc                                                                <  2:3801581/101‑1 (MQ=255)
                                    cgaGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATa                                                             <  1:3801258/101‑1 (MQ=255)
                                    cgaGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATa                                                             <  2:3801734/101‑1 (MQ=255)
                                    cgaGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATa                                                             >  2:3802094/1‑101 (MQ=255)
                                     gaGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATaa                                                            >  1:3802097/1‑101 (MQ=255)
                                     gaGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATaa                                                            <  1:3801572/101‑1 (MQ=255)
                                      aGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAAt                                                           <  2:3801332/101‑1 (MQ=255)
                                       gCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATc                                                          >  2:3802100/1‑101 (MQ=255)
                                           gtgtAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTAc                                                      >  2:3802105/1‑101 (MQ=255)
                                             gtAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCa                                                    <  1:3801634/101‑1 (MQ=255)
                                             gtAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCa                                                    <  2:3801490/101‑1 (MQ=255)
                                             gtAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCa                                                    >  1:3802108/1‑101 (MQ=255)
                                               aGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAgg                                                  <  1:3801567/101‑1 (MQ=255)
                                                ggATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGt                                                 >  2:3802110/1‑101 (MQ=255)
                                                ggATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGt                                                 <  2:3801551/101‑1 (MQ=255)
                                                 caTAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGtt                                                >  1:3802113/2‑101 (MQ=255)
                                                   tAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTtgt                                              <  1:3801410/101‑1 (MQ=255)
                                                   tAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTtgt                                              <  1:3801542/101‑1 (MQ=255)
                                                       cTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTa                                          <  1:3801476/101‑1 (MQ=255)
                                                       cTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTa                                          >  2:3802118/1‑101 (MQ=255)
                                                        tgttgtTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTAc                                         <  2:3801618/101‑1 (MQ=255)
                                                           tgttgGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCAc                                      >  1:3802122/1‑101 (MQ=255)
                                                            gttgGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACt                                     >  2:3802123/1‑101 (MQ=255)
                                                             ttgGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTg                                    >  2:3802126/1‑101 (MQ=255)
                                                              tgGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTgg                                   <  1:3801530/101‑1 (MQ=255)
                                                                 tACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTa                                >  2:3802130/1‑101 (MQ=255)
                                                                  aCTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTAc                               <  1:3801299/101‑1 (MQ=255)
                                                                   cTGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTAcc                              >  1:3802134/1‑101 (MQ=255)
                                                                    tGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCa                             <  1:3801626/101‑1 (MQ=255)
                                                                    tGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCa                             >  1:3802139/1‑101 (MQ=255)
                                                                    tGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCa                             <  2:3801724/101‑1 (MQ=255)
                                                                    tGCGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCa                             >  2:3802138/1‑101 (MQ=255)
                                                                      cGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCaaa                           <  2:3801676/101‑1 (MQ=255)
                                                                      cGTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCaaa                           >  2:3802143/1‑101 (MQ=255)
                                                                       gTTGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAAt                          >  1:3802145/1‑101 (MQ=255)
                                                                        ttGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATg                         <  2:3801597/101‑1 (MQ=255)
                                                                        ttGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATg                         <  2:3801443/101‑1 (MQ=255)
                                                                         tGAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATgg                        <  1:3801670/101‑1 (MQ=255)
                                                                          gAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGt                       >  1:3802150/1‑101 (MQ=255)
                                                                          gAGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGt                       <  1:3801647/101‑1 (MQ=255)
                                                                           aGCTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTa                      >  2:3802153/1‑101 (MQ=255)
                                                                             cTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACa                    <  2:3801920/101‑1 (MQ=255)
                                                                             cTTGTTGAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACa                    >  2:3802157/1‑101 (MQ=255)
                                                                              ttgttgAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACaa                   >  1:3802158/1‑101 (MQ=255)
                                                                              ttgttgAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACaa                   <  2:3801569/101‑1 (MQ=255)
                                                                                 ttgAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGcc                <  1:3801513/101‑1 (MQ=255)
                                                                                  tgAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACGAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTAc                               >  1:3802167/1‑85 (MQ=255)
                                                                                  tgAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCt               >  1:3802164/1‑101 (MQ=255)
                                                                                   gAGTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTg              >  2:3802169/1‑101 (MQ=255)
                                                                                     gTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCg            >  2:3802173/1‑101 (MQ=255)
                                                                                     gTGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCg            <  2:3801468/101‑1 (MQ=255)
                                                                                      tGCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGa           >  1:3802175/1‑101 (MQ=255)
                                                                                       gCAAGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGAc          <  2:3801456/101‑1 (MQ=255)
                                                                                         aaGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGACAt        >  2:3802181/1‑101 (MQ=255)
                                                                                         aaGGGGAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGACAt        >  1:3802180/1‑101 (MQ=255)
                                                                                           ggggAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGACATcc      <  1:3801501/101‑1 (MQ=255)
                                                                                             ggAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGACATCCgg    <  2:3801695/101‑1 (MQ=255)
                                                                                             ggAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGACATCCgg    <  1:3801609/101‑1 (MQ=255)
                                                                                             ggAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGACATCCgg    <  1:3801583/101‑1 (MQ=255)
                                                                                              gAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGACATCCGGt   <  2:3801780/101‑1 (MQ=255)
                                                                                              gAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGACATCCGGt   >  1:3802187/1‑101 (MQ=255)
                                                                                              gAATACCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGACATCCGGt   <  1:3801808/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
AATTTTTCTGTATTAAGGCGAGAGTTATGTGGACGACGAGCTGGTGTAGGATAGGCTGTTGTTGGTACTGCGTTGAGCTTGTTGAGTGCAAGGGGAATGCCTGCTTTGCGCGCCTCTTCAAAAACCAGCGCAGCATAATCGTACCAGGTTGTGGTACCACTGGCTACCAAATGGTACAAGCCTGCGACATCCGGTT  >  NC_000913/2111165‑2111360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: