BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,808,700	A→G	pseudogene (385/1178 nt)	ygaY →	putative transporter YgaY, N‑terminal fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,808,700	0	A	G	100.0%	1538.7 / NA	369	pseudogene (385/1178 nt)	ygaY	putative transporter YgaY, N‑terminal fragment
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (167/202); total (167/202)

Only 100 of 370 total aligned reads displayed.

TCGCTGGCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAAACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAATCTCGGCGGCTGG  >  NC_000913/2808600‑2808797

  gCTGGCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGAc                                                                                                 <  2:5066217/101‑1 (MQ=255)

  gCTGGCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGAc                                                                                                 <  2:5066482/101‑1 (MQ=255)

   cTGGCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGAcg                                                                                                >  1:5066939/1‑101 (MQ=255)

    tGGCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGAcgc                                                                                               <  1:5066539/101‑1 (MQ=255)

    tGGCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGAcgc                                                                                               <  1:5066286/101‑1 (MQ=255)

     ggCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGAcgcg                                                                                              <  2:5066131/101‑1 (MQ=255)

     ggCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGAcgcg                                                                                              <  2:5066337/101‑1 (MQ=255)

     ggCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGAcgcg                                                                                              >  1:5066945/1‑101 (MQ=255)

       cGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGc                                                                                            <  1:5066246/101‑1 (MQ=255)

       cGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGc                                                                                            <  2:5066315/101‑1 (MQ=255)

         atgatgatCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCaa                                                                                          >  2:5066950/1‑101 (MQ=255)

          tgatgatCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCaaa                                                                                         <  2:5066263/101‑1 (MQ=255)

          tgatgatCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCaaa                                                                                         <  2:5066605/101‑1 (MQ=255)

          tgatgatCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCaaa                                                                                         >  1:5066952/1‑101 (MQ=255)

            atgatCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGt                                                                                       >  2:5066956/1‑101 (MQ=255)

             tgatCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTg                                                                                      <  1:5066714/101‑1 (MQ=255)

             tgatCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTg                                                                                      <  2:5066427/101‑1 (MQ=255)

             tgatCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTg                                                                                      >  1:5066958/1‑101 (MQ=255)

             tgatCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTg                                                                                      <  1:5066573/101‑1 (MQ=255)

              gatCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTgg                                                                                     <  2:5066371/101‑1 (MQ=255)

                   tCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGc                                                                                >  2:5066964/1‑101 (MQ=255)

                   tCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGc                                                                                <  1:5065962/101‑1 (MQ=255)

                    cGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCa                                                                               <  2:5066292/101‑1 (MQ=255)

                      gTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACt                                                                             <  1:5066461/101‑1 (MQ=255)

                      gTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACt                                                                             >  1:5066971/1‑101 (MQ=255)

                       tACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACta                                                                            <  2:5066584/101‑1 (MQ=255)

                        aCGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACtat                                                                           <  2:5066566/101‑1 (MQ=255)

                        aCGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACtat                                                                           >  2:5066976/1‑101 (MQ=255)

                        aCGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACtat                                                                           <  1:5066272/101‑1 (MQ=255)

                        aCGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACtat                                                                           >  2:5066973/1‑101 (MQ=255)

                         cGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACtatt                                                                          <  2:5066395/101‑1 (MQ=255)

                           gCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACtattat                                                                        >  1:5066980/1‑101 (MQ=255)

                           gCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACtattat                                                                        <  2:5066438/101‑1 (MQ=255)

                             aTTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGa                                                                      >  1:5066984/1‑101 (MQ=255)

                             aTTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGa                                                                      <  2:5066597/101‑1 (MQ=255)

                              ttAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAg                                                                     <  2:5066474/101‑1 (MQ=255)

                              ttAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAg                                                                     <  1:5066533/101‑1 (MQ=255)

                              ttAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAg                                                                     >  2:5066986/1‑101 (MQ=255)

                              ttAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAg                                                                     <  1:5066797/101‑1 (MQ=255)

                                aaCCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCg                                                                   >  1:5066993/1‑101 (MQ=255)

                                  ccGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGt                                                                 >  2:5066996/1‑101 (MQ=255)

                                   cGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTc                                                                >  1:5066999/1‑101 (MQ=255)

                                    ggTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTct                                                               <  1:5066314/101‑1 (MQ=255)

                                     gTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTctg                                                              >  1:5067003/1‑101 (MQ=255)

                                        tATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTctgctg                                                           >  1:5067010/1‑101 (MQ=255)

                                        tATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTctgctg                                                           >  2:5067008/1‑101 (MQ=255)

                                          ttCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGtt                                                         <  2:5066517/101‑1 (MQ=255)

                                          ttCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGtt                                                         >  1:5067015/1‑101 (MQ=255)

                                          ttCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGtt                                                         <  2:5066799/101‑1 (MQ=255)

                                            ctcAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTgg                                                       >  2:5067016/1‑101 (MQ=255)

                                               aGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGa                                                    <  1:5066393/101‑1 (MQ=255)

                                               aGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGa                                                    <  2:5066718/101‑1 (MQ=255)

                                               aGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGa                                                    >  1:5067019/1‑101 (MQ=255)

                                                  cGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCt                                                 >  1:5067025/1‑101 (MQ=255)

                                                    tGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTg                                               >  1:5067030/1‑101 (MQ=255)

                                                      gCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCt                                             <  1:5066152/101‑1 (MQ=255)

                                                      gCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCt                                             >  2:5067031/1‑101 (MQ=255)

                                                       cacaAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTg                                            <  1:5066473/101‑1 (MQ=255)

                                                       cacaAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTg                                            <  1:5066675/101‑1 (MQ=255)

                                                        acaAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTgg                                           <  1:5066932/101‑1 (MQ=255)

                                                        acaAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTgg                                           <  2:5066635/101‑1 (MQ=255)

                                                        acaAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTgc                                           <  1:5066352/101‑2 (MQ=255)

                                                         caAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGc                                          <  1:5066435/101‑1 (MQ=255)

                                                         caAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGc                                          >  1:5067036/1‑101 (MQ=255)

                                                           aaTTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCAc                                        >  2:5067041/1‑101 (MQ=255)

                                                           aaTTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCAc                                        <  2:5066542/101‑1 (MQ=255)

                                                            aTTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACg                                       >  2:5067044/1‑101 (MQ=255)

                                                             ttCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACgg                                      >  1:5067045/1‑101 (MQ=255)

                                                               cTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCAc                                        >  1:5067050/1‑97 (MQ=255)

                                                                 ggTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAg                                  <  2:5066354/101‑1 (MQ=255)

                                                                  gTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCgg                                                                  >  2:5067058/1‑68 (MQ=255)

                                                                  gTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGt                                 >  1:5067057/1‑101 (MQ=255)

                                                                   ttCCGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGtt                                >  1:5067062/1‑101 (MQ=255)

                                                                     ccGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGc                              >  2:5067066/1‑101 (MQ=255)

                                                                      cGCTGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGcc                             <  2:5066182/101‑1 (MQ=255)

                                                                         tGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGc                                          >  2:5067073/1‑85 (MQ=255)

                                                                         tGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGa                          >  1:5067071/1‑101 (MQ=255)

                                                                         tGGCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGa                          <  2:5066703/101‑1 (MQ=255)

                                                                           gCAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGAtt                        <  2:5066498/101‑1 (MQ=255)

                                                                            cAGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTg                       <  2:5066937/101‑1 (MQ=255)

                                                                             aGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGc                      >  1:5067078/1‑101 (MQ=255)

                                                                             aGCGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGc                      <  2:5066856/101‑1 (MQ=255)

                                                                               cGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTg                    <  1:5066510/101‑1 (MQ=255)

                                                                               cGACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTg                    >  1:5067081/1‑101 (MQ=255)

                                                                                gACGCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTgg                   >  2:5067085/1‑101 (MQ=255)

                                                                                   gCTGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGa                >  1:5067089/1‑101 (MQ=255)

                                                                                     tGGCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAAt              >  2:5067093/1‑101 (MQ=255)

                                                                                      ggCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGTTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAAtc             <  1:5066191/101‑1 (MQ=255)

                                                                                       gCTTCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAAtct            >  1:5067095/1‑101 (MQ=255)

                                                                                       gCTTCACCGGATAGACGCGACAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAAtct            <  2:5066748/101‑1 (MQ=255)

                                                                                         ttCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTg                               <  2:5066443/80‑1 (MQ=255)

                                                                                          tCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGc                                                                    <  1:5066493/42‑1 (MQ=255)

                                                                                          tCACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAATCTcgg         <  1:5066519/101‑1 (MQ=255)

                                                                                           cACCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAATCTcggc        <  1:5066615/101‑1 (MQ=255)

                                                                                            aCCGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAATCTcggcg       >  1:5067100/1‑101 (MQ=255)

                                                                                             ccGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAATCTcggcgg      <  2:5066694/101‑1 (MQ=255)

                                                                                              cGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTggg                                                      >  1:5067104/1‑52 (MQ=255)

                                                                                              cGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAATCTCggcggc     <  1:5066740/101‑1 (MQ=255)

                                                                                              cGGATAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAATCTCggcggc     <  1:5066416/101‑1 (MQ=255)

                                                                                                 aTAGACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAATCTCGGCGGCTgg  <  2:5066454/101‑1 (MQ=255)

TCGCTGGCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAAACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAATCTCGGCGGCTGG  >  NC_000913/2808600‑2808797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`