BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,584,362	A→G	intergenic (+53/‑42)	yrhA → / → yrhD	putative uncharacterized protein YrhA/uncharacterized protein YrhD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,584,362	0	A	G	100.0%	1959.2 / NA	461	intergenic (+53/‑42)	yrhA/yrhD	putative uncharacterized protein YrhA/uncharacterized protein YrhD
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (275/186); total (275/186)

Only 100 of 461 total aligned reads displayed.

TGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGT  >  NC_000913/3584264‑3584459

tGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGcc                                                                                                 >  2:6545316/1‑101 (MQ=255)

   tttCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCcagc                                                                                              >  1:6545325/1‑101 (MQ=255)

    ttCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCcagca                                                                                             >  2:6545329/1‑101 (MQ=255)

    ttCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCcagca                                                                                             >  1:6545333/1‑101 (MQ=255)

     tctcTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCcagcag                                                                                            <  2:6544568/101‑1 (MQ=255)

      ctctTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGa                                                                                           >  2:6545339/1‑101 (MQ=255)

        ctTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGaaa                                                                                         <  1:6544524/101‑1 (MQ=255)

        ctTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGaaa                                                                                         >  1:6545344/1‑101 (MQ=255)

          tCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAAt                                                                                       >  2:6545347/1‑101 (MQ=255)

           cATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGa                                                                                           >  1:6545354/1‑96 (MQ=255)

            aTTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTc                                                                                     >  2:6545356/1‑101 (MQ=255)

              tCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCt                                                                                   <  2:6544756/101‑1 (MQ=255)

              tCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCt                                                                                   >  1:6545361/1‑101 (MQ=255)

               cTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCtt                                                                                  >  2:6545364/1‑101 (MQ=255)

               cTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCtt                                                                                  <  1:6544611/101‑1 (MQ=255)

                ttAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTg                                                                                 >  1:6545370/1‑101 (MQ=255)

                 tAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGt                                                                                >  1:6545377/1‑101 (MQ=255)

                 tAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGt                                                                                >  2:6545380/1‑101 (MQ=255)

                  aaaCGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGtt                                                                               <  2:6544473/101‑1 (MQ=255)

                      gAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGaa                                                                           >  2:6545386/1‑101 (MQ=255)

                       aaaTCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGaaa                                                                          <  1:6544634/101‑1 (MQ=255)

                       aaaTCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGaaa                                                                          >  1:6545391/1‑101 (MQ=255)

                          tCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAAttt                                                                       <  2:6544738/101‑1 (MQ=255)

                          tCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAAttt                                                                       >  1:6545398/1‑101 (MQ=255)

                             tGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAAttt                                                                       >  2:6545404/1‑98 (MQ=255)

                              ggACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCa                                                                   <  1:6544841/101‑1 (MQ=255)

                              ggACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCa                                                                   <  2:6544295/101‑1 (MQ=255)

                              ggACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCa                                                                   >  1:6545405/1‑101 (MQ=255)

                               gACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAg                                                                  <  2:6544434/101‑1 (MQ=255)

                               gACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAg                                                                  >  1:6545411/1‑101 (MQ=255)

                                aCAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGt                                                                 <  2:6544687/101‑1 (MQ=255)

                                aCAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGt                                                                 >  2:6545413/1‑101 (MQ=255)

                                  aGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGc                                                               >  1:6545418/1‑101 (MQ=255)

                                   gttgttCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCa                                                              <  1:6544700/101‑1 (MQ=255)

                                    ttgttCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCaa                                                             >  1:6545425/1‑101 (MQ=255)

                                     tgttCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAg                                                            >  2:6545429/1‑101 (MQ=255)

                                     tgttCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAg                                                            >  1:6545433/1‑101 (MQ=255)

                                      gttCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGc                                                           <  1:6544925/101‑1 (MQ=255)

                                      gttCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGc                                                           <  2:6544892/101‑1 (MQ=255)

                                        tCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTa                                                         >  1:6545441/1‑101 (MQ=255)

                                         cATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTAt                                                        >  1:6545445/1‑101 (MQ=255)

                                         cATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTAt                                                        >  2:6545446/1‑101 (MQ=255)

                                          ataataATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATg                                                       >  2:6545452/1‑101 (MQ=255)

                                           taataaTCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATgg                                                      >  1:6545456/1‑101 (MQ=255)

                                            aataatCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGa                                                     >  1:6545463/1‑101 (MQ=255)

                                            aataatCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGa                                                     <  2:6544710/101‑1 (MQ=255)

                                              taatCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGaaa                                                   <  2:6544837/101‑1 (MQ=255)

                                               aatCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGaaaa                                                  >  1:6545467/1‑101 (MQ=255)

                                                atCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGaaaaa                                                 <  2:6544732/101‑1 (MQ=255)

                                                 tCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAAc                                                >  2:6545472/1‑101 (MQ=255)

                                                  cAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACt                                               <  1:6544567/101‑1 (MQ=255)

                                                   aaaaGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACtt                                              >  1:6545475/1‑101 (MQ=255)

                                                   aaaaGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACtt                                              <  1:6544381/101‑1 (MQ=255)

                                                    aaaGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTa                                             <  2:6544934/101‑1 (MQ=255)

                                                    aaaGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTa                                             <  1:6544746/101‑1 (MQ=255)

                                                     aaGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTAc                                            <  2:6544849/101‑1 (MQ=255)

                                                     aaGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTAc                                            >  2:6545481/1‑101 (MQ=255)

                                                      aGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACa                                           >  1:6545483/1‑101 (MQ=255)

                                                        gAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAAc                                         >  1:6545487/1‑101 (MQ=255)

                                                            cAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGaa                                     <  2:6544880/101‑1 (MQ=255)

                                                             aaaaaTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAAc                                    >  1:6545494/1‑101 (MQ=255)

                                                              aaaaTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACt                                   >  2:6545498/1‑101 (MQ=255)

                                                               aaaTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACTGCACTa                                  >  1:6545504/1‑101 (MQ=255)

                                                               aaaTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTa                                  <  1:6545386/101‑1 (MQ=255)

                                                                aaTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTac                                 >  2:6545507/1‑101 (MQ=255)

                                                                  tCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTacac                               >  2:6545514/1‑101 (MQ=255)

                                                                   cATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACt                              >  1:6545517/1‑101 (MQ=255)

                                                                    aTTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTc                             <  2:6544984/101‑1 (MQ=255)

                                                                     ttGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTcc                            >  2:6545523/1‑101 (MQ=255)

                                                                     ttGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTcc                            >  1:6545524/1‑101 (MQ=255)

                                                                       gTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCtt                          <  2:6544797/101‑1 (MQ=255)

                                                                       gTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCAtt                          <  1:6544484/101‑1 (MQ=255)

                                                                        tAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTa                         >  1:6545531/1‑101 (MQ=255)

                                                                        tAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTa                         <  1:6544718/101‑1 (MQ=255)

                                                                         aaaCCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTaa                        >  2:6545533/1‑101 (MQ=255)

                                                                          aaCCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAg                       >  2:6545539/1‑101 (MQ=255)

                                                                           aCCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGt                      >  1:6545542/1‑101 (MQ=255)

                                                                             cATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTga                    >  2:6545550/1‑101 (MQ=255)

                                                                             cATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTga                    <  1:6544411/101‑1 (MQ=255)

                                                                             cATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTga                    >  1:6545551/1‑101 (MQ=255)

                                                                               tGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTgaga                  >  1:6545556/1‑101 (MQ=255)

                                                                                 ccATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATg                <  1:6544588/101‑1 (MQ=255)

                                                                                 ccATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATg                <  2:6544547/101‑1 (MQ=255)

                                                                                 ccATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATg                <  1:6545190/101‑1 (MQ=255)

                                                                                  cATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATgg               >  1:6545561/1‑101 (MQ=255)

                                                                                   aTCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGa              <  1:6544186/101‑1 (MQ=255)

                                                                                    tCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGAc             <  2:6545323/101‑1 (MQ=255)

                                                                                     cTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGAcc            >  1:6545566/1‑101 (MQ=255)

                                                                                     cTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGAcc            <  1:6544896/101‑1 (MQ=255)

                                                                                      tttttAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCg           <  1:6544667/101‑1 (MQ=255)

                                                                                       ttttAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGa          >  2:6545570/1‑101 (MQ=255)

                                                                                        tttAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGaa         <  1:6544990/101‑1 (MQ=255)

                                                                                        tttAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGaa         <  1:6544808/101‑1 (MQ=255)

                                                                                         ttAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAg        >  1:6545576/1‑101 (MQ=255)

                                                                                          tAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGa       <  2:6544775/101‑1 (MQ=255)

                                                                                           agagATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGAc      <  1:6544780/101‑1 (MQ=255)

                                                                                           agagATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGAc      <  2:6544621/101‑1 (MQ=255)

                                                                                             agaTTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACAt    >  1:6545581/1‑101 (MQ=255)

                                                                                              gaTTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATg   <  2:6544672/101‑1 (MQ=255)

                                                                                              gaTTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATg   >  2:6545584/1‑101 (MQ=255)

TGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGT  >  NC_000913/3584264‑3584459

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`