BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,930,956	Δ1 bp	coding (138/1497 nt)	ravA ←	regulatory ATPase RavA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,930,954	0	G	.	100.0%	1670.5 / NA	314	coding (140/1497 nt)	ravA	regulatory ATPase RavA
Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (185/129); total (185/129)

Only 100 of 342 total aligned reads displayed.

TTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCGGGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACTGC  >  NC_000913/3930854‑3931050

ttcCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGGATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCg                                                                                                  >  1:7317669/1‑101 (MQ=255)

 tcCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCgg                                                                                                 >  2:7317670/1‑101 (MQ=255)

   cGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCggcc                                                                                               >  1:7317679/1‑99 (MQ=255)

   cGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCggcc                                                                                               >  2:7317676/1‑99 (MQ=255)

    ggCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCggcca                                                                                              <  1:7316983/101‑4 (MQ=255)

     gCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCggccaa                                                                                             >  1:7317683/1‑97 (MQ=255)

      cGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAag                                                                                           >  2:7317684/1‑101 (MQ=255)

      cGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAag                                                                                           <  2:7317036/101‑1 (MQ=255)

       gTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAagg                                                                                          >  2:7317688/1‑101 (MQ=255)

        tGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAagga                                                                                         >  1:7317693/1‑101 (MQ=255)

          gagaAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAaggagg                                                                                       >  2:7317696/1‑101 (MQ=255)

           agaAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAggagga                                                                                      <  2:7317082/101‑1 (MQ=255)

           agaAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAggagga                                                                                      >  2:7317699/1‑101 (MQ=255)

           agaAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAggagga                                                                                      <  1:7317176/101‑1 (MQ=255)

            gaAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGaa                                                                                     >  1:7317702/1‑101 (MQ=255)

              aGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAaca                                                                                   <  1:7317201/101‑1 (MQ=255)

               gCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAacac                                                                                  <  1:7317265/101‑1 (MQ=255)

               gCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAacac                                                                                  >  1:7317709/1‑101 (MQ=255)

               gCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAacac                                                                                  >  2:7317708/1‑101 (MQ=255)

                   gTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACtt                                                                              <  1:7317331/101‑1 (MQ=255)

                    tcatcaGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAacaca                                                                                 >  1:7317718/1‑97 (MQ=255)

                    tcatcaGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACttt                                                                             <  2:7317287/101‑1 (MQ=255)

                    tcatcaGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACttt                                                                             >  2:7317716/1‑101 (MQ=255)

                    tcatcaGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACttt                                                                             >  1:7317714/1‑101 (MQ=255)

                      atcaGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTca                                                                           >  2:7317722/1‑101 (MQ=255)

                       tcaGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACCCACTTTcac                                                                          <  2:7317220/101‑1 (MQ=255)

                         aGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTcacca                                                                        >  1:7317727/1‑101 (MQ=255)

                         aGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTcacca                                                                        >  2:7317726/1‑101 (MQ=255)

                           atatTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACt                                                                      <  2:7317267/101‑1 (MQ=255)

                             atTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTa                                                                    >  1:7317731/1‑101 (MQ=255)

                               tCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAAt                                                                  >  2:7317736/1‑101 (MQ=255)

                                cAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATg                                                                 >  1:7317738/1‑101 (MQ=255)

                                cAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATg                                                                 <  2:7317406/101‑1 (MQ=255)

                                 aaaCGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGc                                                                >  1:7317742/1‑101 (MQ=255)

                                  aaCGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGcc                                                               >  2:7317743/1‑101 (MQ=255)

                                     gcgcgGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCt                                                            >  2:7317749/1‑101 (MQ=255)

                                     gcgcgGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCt                                                            <  1:7317136/101‑1 (MQ=255)

                                       gcgGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCtaa                                                          >  1:7317753/1‑101 (MQ=255)

                                        cgGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCtaat                                                         >  2:7317754/1‑101 (MQ=255)

                                        cgGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCtaat                                                         <  1:7317274/101‑1 (MQ=255)

                                          ggCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCtaataa                                                       <  1:7317383/101‑1 (MQ=255)

                                          ggCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCtaataa                                                       <  1:7317309/101‑1 (MQ=255)

                                           gCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATaaa                                                      <  1:7317221/101‑1 (MQ=255)

                                           gCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATaaa                                                      >  2:7317757/1‑101 (MQ=255)

                                           gCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATaaa                                                      <  1:7317240/101‑1 (MQ=255)

                                            cATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAac                                                     >  1:7317761/1‑101 (MQ=255)

                                             aTTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAaca                                                    <  2:7317187/101‑1 (MQ=255)

                                             aTTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAaca                                                    <  2:7317231/101‑1 (MQ=255)

                                              ttCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAacac                                                   >  2:7317766/1‑101 (MQ=255)

                                              ttCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAacac                                                   >  1:7317767/1‑101 (MQ=255)

                                                cTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACaa                                                 >  2:7317776/1‑101 (MQ=255)

                                                cTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACaa                                                 >  1:7317777/1‑101 (MQ=255)

                                                cTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACaa                                                 >  1:7317773/1‑101 (MQ=255)

                                                 tGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAg                                                >  2:7317781/1‑101 (MQ=255)

                                                 tGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAg                                                <  2:7317215/101‑1 (MQ=255)

                                                   aaaGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCg                                              >  1:7317787/1‑101 (MQ=255)

                                                    aaGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCgg                                             >  2:7317788/1‑101 (MQ=255)

                                                     aGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGa                                            >  1:7317791/1‑101 (MQ=255)

                                                      ggCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGAt                                           >  2:7317795/1‑101 (MQ=255)

                                                      ggCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGAt                                           <  1:7317111/101‑1 (MQ=255)

                                                       gCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCtaata                                                        >  1:7317797/1‑87 (MQ=255)

                                                       gCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATg                                          <  1:7317356/101‑1 (MQ=255)

                                                         gAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGc                                        <  2:7317153/101‑1 (MQ=255)

                                                         gAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGc                                        <  2:7317177/101‑1 (MQ=255)

                                                          aaTTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCg                                       <  2:7317353/101‑1 (MQ=255)

                                                           aTTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGt                                      >  2:7317802/1‑101 (MQ=255)

                                                             tttAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTgg                                    >  2:7317806/1‑101 (MQ=255)

                                                              ttAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAaggag                                                                                        <  2:7317322/48‑1 (MQ=255)

                                                               tAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATg                                          <  1:7317160/93‑1 (MQ=255)

                                                                aaGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTa                                 >  2:7317812/1‑101 (MQ=255)

                                                                aaGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTa                                 >  1:7317810/1‑101 (MQ=255)

                                                                 aGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTAc                                >  2:7317815/1‑101 (MQ=255)

                                                                 aGCGCCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTAc                                <  2:7317385/101‑1 (MQ=255)

                                                                   cgcCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGt                              >  1:7317818/1‑101 (MQ=255)

                                                                    gcCGGGCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGtt                             >  2:7317824/1‑101 (MQ=255)

                                                                       gggCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCAt                          >  2:7317829/1‑101 (MQ=255)

                                                                       gggCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCAt                          <  1:7317403/101‑1 (MQ=255)

                                                                       gggCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCAt                          >  1:7317827/1‑101 (MQ=255)

                                                                         gCGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATaa                        >  2:7317834/1‑101 (MQ=255)

                                                                          cGATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATaaa                       <  1:7317415/101‑1 (MQ=255)

                                                                           gATCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAg                      >  1:7317837/1‑101 (MQ=255)

                                                                            aTCAAACTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGc                     <  2:7317251/101‑1 (MQ=255)

                                                                               aaaCTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGcccc                  >  1:7317842/1‑101 (MQ=255)

                                                                               aaaCTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGcccc                  <  2:7317536/101‑1 (MQ=255)

                                                                                aaCTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCt                 >  1:7317845/1‑101 (MQ=255)

                                                                                aaCTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCt                 >  2:7317846/1‑101 (MQ=255)

                                                                                  cTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCttt               >  1:7317850/1‑101 (MQ=255)

                                                                                  cTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCttt               <  1:7317618/101‑1 (MQ=255)

                                                                                  cTTTTGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCttt               <  2:7317430/101‑1 (MQ=255)

                                                                                   ttttGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCtttt              >  2:7317852/1‑101 (MQ=255)

                                                                                      tGGCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCa           <  1:7317505/101‑1 (MQ=255)

                                                                                        gCAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAAc         <  2:7317366/101‑1 (MQ=255)

                                                                                         cAATACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACg        <  2:7317472/101‑1 (MQ=255)

                                                                                          aaTACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGa       <  2:7317642/101‑1 (MQ=255)

                                                                                          aaTACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGa       >  1:7317857/1‑101 (MQ=255)

                                                                                           aTACCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGaa      >  1:7317860/1‑101 (MQ=255)

                                                                                             aCCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACt    >  1:7317864/1‑101 (MQ=255)

                                                                                             aCCTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACt    <  2:7317334/101‑1 (MQ=255)

                                                                                              ccTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCg                                       <  1:7317285/65‑1 (MQ=255)

                                                                                               cTGGC‑GGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACTGc  >  1:7317869/1‑101 (MQ=255)

TTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCGGGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACTGC  >  NC_000913/3930854‑3931050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`