Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 850,986 (A)6→7 intergenic (+21/+28) ompX → / ← opgE outer membrane protein X/phosphoethanolamine transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913850,9801.A100.0% 1564.6 / NA 360intergenic (+15/+34)ompX/opgEouter membrane protein X/phosphoethanolamine transferase
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base A (179/181);  total (179/181)

Only 100 of 405 total aligned reads displayed.

TTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑AAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATCCACCTTCTGTAACTGGA  >  NC_000913/850880‑851075
                                                                                                     |                                                                                               
 tGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGAtat‑a                                                                                                >  2:1573964/1‑101 (MQ=255)
   ctctGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑aaa                                                                                              >  2:1573969/1‑101 (MQ=255)
     ctGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑aaaaa                                                                                            >  1:1573974/1‑101 (MQ=255)
      tGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑aaaaaa                                                                                           <  1:1573350/101‑1 (MQ=255)
      tGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑aaaaaa                                                                                           <  2:1573559/101‑1 (MQ=255)
       ggACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑aaaaaaa                                                                                          <  1:1573336/101‑2 (MQ=255)
        gACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCCCTTTGGTGATAT‑aaaaaaat                                                                                         >  2:1573978/1‑99 (MQ=255)
         aCTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑aaaaaaatc                                                                                        <  1:1573488/101‑4 (MQ=255)
          cTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑aaaaaaatcc                                                                                       <  1:1573423/101‑5 (MQ=255)
           ttCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑aaaaaaatccg                                                                                      <  2:1573322/101‑6 (MQ=255)
           ttCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑aaaaaaatccg                                                                                      <  2:1573274/101‑6 (MQ=255)
           ttCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑aaaaaaatccg                                                                                      >  2:1573982/1‑96 (MQ=255)
              tctTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCct                                                                                    >  2:1573988/1‑101 (MQ=255)
              tctTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCct                                                                                    >  1:1573986/1‑101 (MQ=255)
                ttACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCctct                                                                                  <  2:1573361/101‑1 (MQ=255)
                ttACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCctct                                                                                  <  2:1573311/101‑1 (MQ=255)
                  aCGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCg                                                                                <  1:1573269/101‑1 (MQ=255)
                  aCGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCg                                                                                >  2:1573994/1‑101 (MQ=255)
                   cGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCgt                                                                               <  1:1573396/101‑2 (MQ=255)
                   cGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCgg                                                                               >  1:1573995/1‑101 (MQ=255)
                      gCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGc                                                                            >  1:1574001/1‑101 (MQ=255)
                       cAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCg                                                                           >  2:1574004/1‑101 (MQ=255)
                        agagCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCgg                                                                          <  2:1573505/101‑1 (MQ=255)
                        agagCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCgg                                                                          >  1:1574010/1‑101 (MQ=255)
                        agagCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCgg                                                                          >  2:1574011/1‑101 (MQ=255)
                           gCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGAtt                                                                       <  2:1573608/101‑1 (MQ=255)
                            ccGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGAttt                                                                      >  2:1574016/1‑101 (MQ=255)
                              gTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCgg                                                                          >  2:1574021/1‑95 (MQ=255)
                               tATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTg                                                                   <  2:1573697/101‑1 (MQ=255)
                               tATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTg                                                                   >  1:1574024/1‑101 (MQ=255)
                                  tCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGCtt                                                                       >  2:1574033/1‑94 (MQ=255)
                                  tCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGttt                                                                >  1:1574030/1‑101 (MQ=255)
                                      aGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTaa                                                            <  1:1573382/101‑1 (MQ=255)
                                      aGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTaa                                                            <  1:1573320/101‑1 (MQ=255)
                                       gCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAg                                                           >  2:1574037/1‑101 (MQ=255)
                                         gTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGt                                                         >  1:1574041/1‑101 (MQ=255)
                                           tGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGact                                                                       >  1:1574047/1‑83 (MQ=255)
                                           tGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGttt                                                       <  2:1573236/101‑1 (MQ=255)
                                           tGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGttt                                                       <  2:1573548/101‑1 (MQ=255)
                                           tGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGttt                                                       <  1:1573594/101‑1 (MQ=255)
                                            gACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGttttt                                                              >  2:1574050/1‑93 (MQ=255)
                                             aCGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCg                                                     <  2:1573477/101‑1 (MQ=255)
                                               gTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCggg                                                   >  1:1574053/1‑101 (MQ=255)
                                               gTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCggg                                                   <  2:1573339/101‑1 (MQ=255)
                                               gTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCggg                                                   <  2:1573855/101‑1 (MQ=255)
                                                 aGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTc                                                 <  2:1573497/101‑1 (MQ=255)
                                                 aGGCACCTGGATTGCCGGTGTCGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTc                                                 <  1:1573625/101‑1 (MQ=255)
                                                  ggCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCg                                                <  1:1573433/101‑1 (MQ=255)
                                                    cACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGaa                                              <  1:1573518/101‑1 (MQ=255)
                                                    cACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGaa                                              >  2:1574059/1‑101 (MQ=255)
                                                    cACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGaa                                              <  2:1573076/101‑1 (MQ=255)
                                                     aCCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGaaa                                             >  1:1574060/1‑101 (MQ=255)
                                                     aCCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGaaa                                             <  1:1573569/101‑1 (MQ=255)
                                                      ccTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTg                                                                   <  1:1573293/78‑1 (MQ=255)
                                                      ccTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGaaaa                                            >  2:1574066/1‑101 (MQ=255)
                                                      ccTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGaaaa                                            <  1:1573670/101‑1 (MQ=255)
                                                       cTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAat                                           <  2:1573410/101‑1 (MQ=255)
                                                       cTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAat                                           <  1:1573025/101‑1 (MQ=255)
                                                       cTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAat                                           <  1:1573451/101‑1 (MQ=255)
                                                       cTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAat                                           >  1:1574068/1‑101 (MQ=255)
                                                         ggATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGaa                                              >  1:1574073/1‑96 (MQ=255)
                                                         ggATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAatat                                         <  1:1573544/101‑1 (MQ=255)
                                                         ggATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAatat                                         <  2:1573528/101‑1 (MQ=255)
                                                            ttGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAata                                          >  2:1574077/1‑97 (MQ=255)
                                                              gCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGtt                                    <  1:1573358/101‑1 (MQ=255)
                                                              gCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGtt                                    <  2:1573584/101‑1 (MQ=255)
                                                              gCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGtt                                    <  2:1573727/101‑1 (MQ=255)
                                                              gCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGtt                                    <  1:1573692/101‑1 (MQ=255)
                                                               ccGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTc                                   <  1:1573926/101‑1 (MQ=255)
                                                                cGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTct                                  <  1:1573532/101‑2 (MQ=255)
                                                                cGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTcc                                  >  2:1574084/1‑101 (MQ=255)
                                                                 ggTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCg                                 <  2:1573434/101‑1 (MQ=255)
                                                                 ggTGTTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCg                                 >  1:1574086/1‑101 (MQ=255)
                                                                  gtgtTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCga                                >  2:1574092/1‑101 (MQ=255)
                                                                   tgtTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCgag                               <  2:1573254/101‑1 (MQ=255)
                                                                    gtTGGTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCgaga                              >  1:1574093/1‑101 (MQ=255)
                                                                       ggTTACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATgg                           <  2:1573445/101‑1 (MQ=255)
                                                                         ttACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCgg                                                                               >  2:1574101/1‑47 (MQ=39)
                                                                         ttACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGAt                             <  1:1573157/97‑1 (MQ=255)
                                                                         ttACCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGtt                         >  1:1574100/1‑101 (MQ=255)
                                                                           aCCGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGt                       <  1:1573813/101‑1 (MQ=255)
                                                                            ccGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTa                      <  2:1573668/101‑1 (MQ=255)
                                                                            ccGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTa                      <  1:1573725/101‑1 (MQ=255)
                                                                             cGCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTaa                     <  2:1573647/101‑1 (MQ=255)
                                                                              gCTTCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAAt                    >  1:1574108/1‑101 (MQ=255)
                                                                                ttCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATcc                  >  1:1574112/1‑101 (MQ=255)
                                                                                ttCTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATcc                  >  2:1574114/1‑101 (MQ=255)
                                                                                  cTAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATCCAc                >  2:1574119/1‑101 (MQ=255)
                                                                                   tAATCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATCCAcc               >  1:1574124/1‑101 (MQ=255)
                                                                                    aaTCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATCCACCt              <  1:1573784/101‑1 (MQ=255)
                                                                                    aaTCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATCCACCt              >  2:1574126/1‑101 (MQ=255)
                                                                                     aTCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGa                                                                         >  2:1574132/1‑41 (MQ=38)
                                                                                      tCACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATCCACCTTc            >  1:1574134/1‑101 (MQ=255)
                                                                                       cACTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCg                                                >  2:1574139/1‑64 (MQ=255)
                                                                                        aCTTTGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATCCACCTTCTg          >  1:1574142/1‑101 (MQ=255)
                                                                                          tttGGTGATATAAAAAAATCCGCCTCTCGGGGCGGAtttt                                                                     >  2:1574149/1‑40 (MQ=255)
                                                                                           ttGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATCCACCTTCTGTaa       >  1:1574150/1‑101 (MQ=255)
                                                                                            tGGTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTc                                   >  2:1574156/1‑72 (MQ=255)
                                                                                              gTGATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATCCACCTTCTGTAACTg    >  1:1574159/1‑101 (MQ=255)
                                                                                                gATATAAAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATCCACCTTCTGTAACTGGa  <  1:1573470/101‑1 (MQ=255)
                                                                                                     |                                                                                               
TTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAATCACTTTGGTGATAT‑AAAAAATCCGCCTCTCGGGGCGGATTTTTGTTTTTAAGGTTTCGGGTCGAAAATATCGGTTCCGAGATGGTTGTAATCCACCTTCTGTAACTGGA  >  NC_000913/850880‑851075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑