BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,554,784	(T)_7→8	coding (886/1698 nt)	maeA ←	malate dehydrogenase, NAD‑requiring

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,554,777	1	.	T	100.0%	1123.0 / NA	264	I298N (ATC→AAC)	maeA	malate dehydrogenase, NAD‑requiring
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (158/106); total (158/106)

Only 100 of 299 total aligned reads displayed.

TTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGA‑TTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAA  >  NC_000913/1554677‑1554871

tttCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGa                                                                                                 <  1:2852751/101‑1 (MQ=255)

  tCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGA‑tt                                                                                              <  2:2852696/101‑1 (MQ=255)

    tGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGA‑tttt                                                                                            >  2:2853073/1‑101 (MQ=255)

     gccgcgccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGA‑ttttt                                                                                           >  2:2853077/1‑101 (MQ=255)

       cgcgccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGA‑ttttttt                                                                                         >  1:2853079/1‑101 (MQ=255)

        gcgccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGA‑tttttttt                                                                                        >  1:2853082/1‑100 (MQ=255)

          gccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGA‑ttttttttct                                                                                      <  2:2852678/101‑4 (MQ=255)

          gccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGA‑ttttttttct                                                                                      >  1:2853086/1‑98 (MQ=255)

           ccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGA‑ttttttttctc                                                                                     >  1:2853089/1‑97 (MQ=255)

           ccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGA‑ttttttttctc                                                                                     <  1:2852873/101‑5 (MQ=255)

              cTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCt                                                                                   <  1:2852624/101‑1 (MQ=255)

              cTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCt                                                                                   >  2:2853093/1‑101 (MQ=255)

               ttCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCtt                                                                                  >  1:2853098/1‑101 (MQ=255)

               ttCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCtt                                                                                  >  2:2853097/1‑101 (MQ=255)

                  cTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAAc                                                                               <  1:2852344/101‑1 (MQ=255)

                   tCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACt                                                                              <  1:2852410/101‑1 (MQ=255)

                     gCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGa                                                                            >  2:2853105/1‑101 (MQ=255)

                     gCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGa                                                                            >  1:2853104/1‑101 (MQ=255)

                      cTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGac                                                                           <  1:2852709/101‑1 (MQ=255)

                       ttAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGacc                                                                          >  2:2853108/1‑101 (MQ=255)

                       ttAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGacc                                                                          <  1:2852386/101‑1 (MQ=255)

                       ttAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGacc                                                                          <  2:2852850/101‑1 (MQ=255)

                         aaTCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGaccac                                                                        >  1:2853113/1‑101 (MQ=255)

                           tCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCt                                                                      >  2:2853114/1‑101 (MQ=255)

                            ccTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCt                                                                      >  1:2853119/1‑100 (MQ=255)

                             cTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGc                                                                    <  1:2852792/101‑1 (MQ=255)

                              ttCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGcc                                                                   <  2:2852337/101‑1 (MQ=255)

                              ttCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGcc                                                                   >  1:2853123/1‑101 (MQ=255)

                               tCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCcg                                                                  >  2:2853126/1‑101 (MQ=255)

                                 gcgcTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCcgcg                                                                >  2:2853129/1‑101 (MQ=255)

                                 gcgcTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCcgcg                                                                >  1:2853130/1‑101 (MQ=255)

                                 gcgcTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCcgcg                                                                <  1:2852505/101‑1 (MQ=255)

                                  cgcTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCcgcgc                                                               <  1:2852484/101‑1 (MQ=255)

                                   gcTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCcgcgcg                                                              >  2:2853134/1‑101 (MQ=255)

                                    cTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCgg                                                             >  2:2853138/1‑101 (MQ=255)

                                    cTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCgg                                                             >  2:2853141/1‑101 (MQ=255)

                                     tGGGTCTGGGAGATGATCATTTCGGGAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTa                                                                                 >  1:2853142/1‑80 (MQ=255)

                                      gggTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCt                                                           <  1:2852778/101‑1 (MQ=255)

                                         tCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCt                                                           >  2:2853147/1‑98 (MQ=255)

                                          cTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTtg                                                         >  1:2853150/1‑99 (MQ=255)

                                           tGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTtgctg                                                      >  2:2853152/1‑101 (MQ=255)

                                            gggAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTtgctgc                                                     >  2:2853155/1‑101 (MQ=255)

                                             ggAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCg                                                    >  1:2853158/1‑101 (MQ=255)

                                             ggAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCg                                                    <  2:2852521/101‑1 (MQ=255)

                                              gagaTGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGa                                                   >  2:2853161/1‑101 (MQ=255)

                                               agaTGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGAt                                                  >  1:2853164/1‑101 (MQ=255)

                                                gatgatCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATc                                                 >  1:2853168/1‑101 (MQ=255)

                                                gatgatCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATc                                                 >  2:2853167/1‑101 (MQ=255)

                                                gatgatCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATc                                                 <  1:2852560/101‑1 (MQ=255)

                                                  tgatCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAg                                               >  2:2853172/1‑101 (MQ=255)

                                                   gatCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAgt                                              <  2:2852737/101‑1 (MQ=255)

                                                   gatCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAgt                                              >  2:2853175/1‑101 (MQ=255)

                                                      cATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGtgtg                                           >  2:2853181/1‑101 (MQ=255)

                                                      cATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGtgtg                                           >  1:2853179/1‑101 (MQ=255)

                                                       aTTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGc                                          >  1:2853183/1‑101 (MQ=255)

                                                         ttCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCg                                        >  1:2853186/1‑101 (MQ=255)

                                                            ggCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACt                                     >  2:2853190/1‑101 (MQ=255)

                                                             gCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTg                                    >  1:2853193/1‑101 (MQ=255)

                                                               aaTGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGtt                                  <  2:2852965/101‑1 (MQ=255)

                                                                aTGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTa                                 >  1:2853196/1‑101 (MQ=255)

                                                                aTGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTa                                 <  1:2852762/101‑1 (MQ=255)

                                                                 tGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAg                                               >  2:2853198/1‑86 (MQ=255)

                                                                   ccGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTAccg                              >  2:2853203/1‑101 (MQ=255)

                                                                   ccGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTAccg                              <  2:2852916/101‑1 (MQ=255)

                                                                   ccGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTAccg                              >  1:2853204/1‑101 (MQ=255)

                                                                   ccGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTAccg                              <  1:2852652/101‑1 (MQ=255)

                                                                    cGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTtgctgc                                                     >  1:2853208/1‑77 (MQ=255)

                                                                     gCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTAccgcc                            <  1:2852686/101‑1 (MQ=255)

                                                                     gCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTAccgcc                            >  2:2853210/1‑101 (MQ=255)

                                                                      cATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTAccgccg                           <  1:2852671/101‑1 (MQ=255)

                                                                      cATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTAccgccg                           >  1:2853214/1‑101 (MQ=255)

                                                                       aTCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTAccgcc                            >  2:2853217/1‑99 (MQ=255)

                                                                       aTCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACcgccgc                          <  1:2852736/101‑1 (MQ=255)

                                                                         cccGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAg                        >  1:2853220/1‑101 (MQ=255)

                                                                          ccGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGt                       <  2:2852805/101‑1 (MQ=255)

                                                                          ccGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGt                       <  1:2852584/101‑1 (MQ=255)

                                                                           cGCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTg                      <  1:2852816/101‑1 (MQ=255)

                                                                            gCTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCcgcgcg                                                              >  2:2853224/1‑60 (MQ=255)

                                                                             cTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGcc                    >  1:2853225/1‑101 (MQ=255)

                                                                             cTGAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGcc                    <  1:2852617/101‑1 (MQ=255)

                                                                               gAACCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACAGCCGCAGGGc                     >  2:2853229/1‑98 (MQ=255)

                                                                                aaCCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTg                 <  1:2852602/101‑1 (MQ=255)

                                                                                 aCCTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGa                >  1:2853231/1‑101 (MQ=255)

                                                                                  ccTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGaa               <  2:2852824/101‑1 (MQ=255)

                                                                                  ccTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGaa               <  2:2852658/101‑1 (MQ=255)

                                                                                   cTGCGCCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGa                >  1:2853236/1‑99 (MQ=255)

                                                                                      cgcCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTc           <  2:2852811/101‑1 (MQ=255)

                                                                                      cgcCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTc           <  1:2852900/101‑1 (MQ=255)

                                                                                       gcCAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCa          <  2:2852585/101‑1 (MQ=255)

                                                                                        ccAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCAt         >  2:2853238/1‑101 (MQ=255)

                                                                                         cAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATc        <  2:2852726/101‑1 (MQ=255)

                                                                                         cAAGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATc        <  2:2852571/101‑1 (MQ=255)

                                                                                          aaGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCg       >  1:2853242/1‑101 (MQ=255)

                                                                                          aaGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCg       <  1:2852978/101‑1 (MQ=255)

                                                                                          aaGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCg       >  2:2853243/1‑101 (MQ=255)

                                                                                           aGGAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGt      <  1:2852632/101‑1 (MQ=255)

                                                                                             gAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTa    <  2:2852708/101‑1 (MQ=255)

                                                                                             gAAGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTa    <  2:2852421/101‑1 (MQ=255)

                                                                                              aaGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTaa   >  2:2853247/1‑101 (MQ=255)

                                                                                               aGACGATTTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTaaa  >  1:2853251/1‑101 (MQ=255)

TTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGA‑TTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAA  >  NC_000913/1554677‑1554871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`