| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 306,943 | T→C | Y797C (TAC→TGC) | ecpC ← | putative fimbrial usher protein EcpC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 306,943 | 0 | T | C | 99.7% | 1496.6 / ‑4.8 | 351 | Y797C (TAC→TGC) | ecpC | putative fimbrial usher protein EcpC |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (162/188); total (163/188) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 351 total aligned reads displayed.
CCCACGATGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGTAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGGTTGTTAATCCGTGCG > NC_000913/306845‑307041 | ccACGATGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGc < 2:565246/101‑1 (MQ=255) ccACGATGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGc < 2:565430/101‑1 (MQ=255) cACGATGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCg < 1:564952/101‑1 (MQ=255) cACGATGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCg < 2:565101/101‑1 (MQ=255) cGATGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGaa < 2:565159/101‑1 (MQ=255) gATGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGaaa > 2:565863/1‑101 (MQ=255) gATGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGaaa < 1:565268/101‑1 (MQ=255) gATGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGaaa < 2:565467/101‑1 (MQ=255) gATGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGaaa > 1:565862/1‑101 (MQ=255) tGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAAt < 1:565374/101‑1 (MQ=255) gagaGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATc > 2:565866/1‑101 (MQ=255) gagaGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATc < 2:565227/101‑1 (MQ=255) gagaGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATc < 2:565321/101‑1 (MQ=255) gagaGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATc < 1:565323/101‑1 (MQ=255) agagGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCg < 1:565157/101‑1 (MQ=255) agGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGAt < 2:565562/101‑1 (MQ=255) agGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGAt < 1:565304/101‑1 (MQ=255) ggCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATa < 2:565536/101‑1 (MQ=255) gCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAg > 1:565870/1‑101 (MQ=255) cGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTg < 1:565358/101‑1 (MQ=255) cTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTggg < 2:565378/101‑1 (MQ=255) tGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTgggg > 1:565876/1‑101 (MQ=255) gCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGt < 1:565479/101‑1 (MQ=255) cAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTa < 1:565332/101‑1 (MQ=255) aGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTggg > 2:565881/1‑97 (MQ=255) aGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTAt < 1:565294/101‑1 (MQ=255) gACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTAtt > 1:565882/1‑101 (MQ=255) aCCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTAttt < 2:565295/101‑1 (MQ=255) ccACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTc < 2:565301/101‑1 (MQ=255) acaTCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCtt < 2:565394/101‑1 (MQ=255) cACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATcc > 2:565888/1‑101 (MQ=255) cACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGGATTTCTTATcc > 1:565889/1‑101 (MQ=255) aCCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCa > 1:565893/1‑101 (MQ=255) aCCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCa < 1:565417/101‑1 (MQ=255) aCCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCa < 1:565618/101‑1 (MQ=255) ccGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCAc < 2:565492/101‑1 (MQ=255) cccAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTcc < 1:565342/101‑1 (MQ=255) cccAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTcc < 1:565548/101‑1 (MQ=255) cccAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTcc > 2:565899/1‑101 (MQ=255) cAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCAt < 2:565513/101‑1 (MQ=255) aGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATg < 2:565284/101‑1 (MQ=255) aGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATg > 1:565902/1‑101 (MQ=255) gACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGa < 2:565008/101‑1 (MQ=255) aCGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGAc > 1:565905/1‑101 (MQ=255) aCGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGAc > 1:565909/1‑101 (MQ=255) cGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACa > 2:565911/1‑101 (MQ=255) ggCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACaa > 1:565913/1‑101 (MQ=255) gCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACaaa < 2:565344/101‑1 (MQ=255) ccGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTc < 2:565388/101‑1 (MQ=255) ccGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTc > 1:565918/1‑101 (MQ=255) ccGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTc < 1:565436/101‑1 (MQ=255) gcgcgcCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGc > 2:565921/1‑101 (MQ=255) gcgcgcCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGc < 2:565311/101‑1 (MQ=255) gcgcgcCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGc > 2:565924/1‑101 (MQ=255) cgcgcCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGcc < 1:565506/101‑1 (MQ=255) cgcgcCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGcc < 2:565744/101‑1 (MQ=255) gcCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGtt > 1:565928/1‑101 (MQ=255) ccTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCTCTGCAGc > 2:565931/1‑48 (MQ=255) tGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTc < 2:565276/101‑1 (MQ=255) tGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTc > 1:565936/1‑101 (MQ=255) gTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCAt < 2:565403/101‑1 (MQ=255) gTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCAt > 1:565939/1‑101 (MQ=255) ttGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATc < 2:565444/101‑1 (MQ=255) tGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCg > 2:565944/1‑101 (MQ=255) tGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCg < 2:565460/101‑1 (MQ=255) gAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCgg > 1:565946/1‑101 (MQ=255) aGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCggt > 1:565950/1‑101 (MQ=255) gTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCggtt > 2:565953/1‑101 (MQ=255) ttCCAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCggttc < 2:565349/101‑1 (MQ=255) cAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCggttcggg < 1:565177/101‑1 (MQ=255) cAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCggttcggg > 1:565958/1‑101 (MQ=255) cAGAGCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCg > 2:565960/1‑94 (MQ=255) agagCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCggttcgggt < 2:565662/101‑1 (MQ=255) agCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCggttcgggttc > 1:565967/1‑101 (MQ=255) agCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCggttcgggttc > 2:565965/1‑101 (MQ=255) gCCACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCggttcgggttcg < 2:565524/101‑1 (MQ=255) cACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGc > 1:565972/1‑101 (MQ=255) cACTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGc > 2:565974/1‑101 (MQ=255) acctCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCAt < 2:565039/62‑1 (MQ=255) aCTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGcc < 1:565464/101‑1 (MQ=255) aCTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGcc < 1:565278/101‑1 (MQ=255) aCTTCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGcc > 1:565977/1‑101 (MQ=255) ttCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGa < 1:565016/101‑1 (MQ=255) ttCGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGa > 2:565983/1‑101 (MQ=255) cGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGata > 2:565986/1‑101 (MQ=255) cGCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGGATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGata > 1:565987/1‑101 (MQ=255) gCAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGatat < 1:565245/101‑1 (MQ=255) cAGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATg > 1:565992/1‑101 (MQ=255) aGGTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATgg > 1:565996/1‑101 (MQ=255) ggTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGgt > 2:565999/1‑101 (MQ=255) ggTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGgt < 1:565685/101‑1 (MQ=255) ggTTTTATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGgt < 1:565452/101‑1 (MQ=255) ttATTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGgttgtt > 1:566001/1‑101 (MQ=255) aTTGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGGTTGTTaa > 1:566007/1‑101 (MQ=255) ttGCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGGTTGTTAAt > 2:566009/1‑101 (MQ=255) gCCACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGGTTGTTAATcc < 2:565498/101‑1 (MQ=255) ccACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGGTTGTTAATCCg > 1:566012/1‑101 (MQ=255) cACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGGTTGTTAATCCGt > 2:566019/1‑101 (MQ=255) cACTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGGTTGTTAATCCGt > 1:566018/1‑101 (MQ=255) cTGCAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGGTTGTTAATCCGTGc < 1:565117/101‑1 (MQ=255) | CCCACGATGAGAGGCCGCTGCAGACCACATCACCGACCCAGACGGCACCGCGCGCCTGGTTGAGTTCCAGAGCCACTTCGCAGGTTTTATTGCCACTGTAGCGAAAATCGATAGTGGGGTATTTCTTATCCACGTCCATGACAAACTCGCCGTTTTCATCGGTTCGGGTTCGGCCGATATGGTTGTTAATCCGTGCG > NC_000913/306845‑307041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |