Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 589,295 T→C T554A (ACC→GCC)  nfrA ← bacteriophage N4 receptor, outer membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913589,2950TC82.5% 992.6 / 174.7 355T554A (ACC→GCC) nfrAbacteriophage N4 receptor, outer membrane protein
Reads supporting (aligned to +/- strand):  ref base T (29/33);  new base C (152/141);  total (181/174)
Fisher's exact test for biased strand distribution p-value = 4.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 359 total aligned reads displayed.

GCATGCAGCCACCAGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTGATACGCCTGA  >  NC_000913/589195‑589395
                                                                                                    |                                                                                                    
gcATGCAGCCACCAGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGt                                                                                                      >  1:1094446/1‑101 (MQ=255)
  aTGCAGCCACCAGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCAt                                                                                                    <  1:1094021/101‑1 (MQ=255)
     cAGCCACCAGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTgg                                                                                                 >  2:1094461/1‑101 (MQ=255)
     cAGCCACCAGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTgg                                                                                                 >  1:1094460/1‑101 (MQ=255)
      aGCCACCAGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGgc                                                                                                >  1:1094465/1‑101 (MQ=255)
        ccaccaGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGgcag                                                                                              >  2:1094468/1‑101 (MQ=255)
         caccaGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGgcagc                                                                                             >  1:1094472/1‑101 (MQ=255)
          accaGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGgcagca                                                                                            <  1:1094215/101‑1 (MQ=255)
           ccaGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGgcagcag                                                                                           <  2:1094013/101‑1 (MQ=255)
            caGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGgcagcagc                                                                                          <  1:1093986/101‑1 (MQ=255)
            caGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGgcagcagc                                                                                          >  1:1094480/1‑101 (MQ=255)
            caGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGgcagcagc                                                                                          >  2:1094481/1‑101 (MQ=255)
            caGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGgcagcagc                                                                                          <  1:1093832/101‑1 (MQ=255)
             aGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGgcagcagca                                                                                         >  2:1094486/1‑101 (MQ=255)
             aGTAGAGGGCATTGCTTCCCAGTCCACGTTGTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGgcagc                                                                                             <  1:1094006/97‑1 (MQ=255)
              gTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCagcaa                                                                                        >  1:1094487/1‑101 (MQ=255)
              gTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCagcaa                                                                                        <  1:1094160/101‑1 (MQ=255)
               tAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCagcaag                                                                                       <  1:1093851/101‑1 (MQ=255)
                  agGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAg                                                                                    >  1:1094494/1‑101 (MQ=255)
                     gCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATc                                                                                 >  2:1094498/1‑101 (MQ=255)
                       aTTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCt                                                                               <  1:1094123/101‑1 (MQ=255)
                       aTTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCt                                                                               >  1:1094505/1‑101 (MQ=255)
                       aTTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCt                                                                               >  2:1094503/1‑101 (MQ=255)
                         tGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCa                                                                             <  1:1093997/101‑1 (MQ=255)
                           cTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCAtt                                                                           >  2:1094508/1‑101 (MQ=255)
                            ttCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTg                                                                          <  1:1094185/101‑1 (MQ=255)
                            ttCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTg                                                                          >  2:1094513/1‑101 (MQ=255)
                            ttCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTg                                                                          <  1:1093446/101‑1 (MQ=255)
                               ccAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTc                                                                       >  2:1094519/1‑101 (MQ=255)
                               ccAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTc                                                                       >  1:1094517/1‑101 (MQ=255)
                                 aGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCAt                                                                     >  2:1094525/1‑101 (MQ=255)
                                  gTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATg                                                                    >  1:1094527/1‑101 (MQ=255)
                                      aCGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTc                                                                       <  1:1094030/94‑1 (MQ=255)
                                       cGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTg                                                               >  2:1094532/1‑101 (MQ=255)
                                       cGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCAt                                                                     <  2:1094063/95‑1 (MQ=255)
                                       cGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTg                                                               <  1:1093929/101‑1 (MQ=255)
                                        gTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGgca                                                                                               <  2:1094246/68‑1 (MQ=255)
                                        gTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCACACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGa                                                              >  1:1094534/1‑101 (MQ=255)
                                         tttttCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGt                                                                <  2:1094205/98‑1 (MQ=255)
                                         tttttCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCt                                                                               <  2:1093862/83‑1 (MQ=255)
                                          ttttCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAg                                                            <  1:1093909/101‑1 (MQ=255)
                                           tttCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGa                                                           >  2:1094539/1‑101 (MQ=255)
                                           tttCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGa                                                           >  1:1094542/1‑101 (MQ=255)
                                             tCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACt                                                         >  1:1094548/1‑101 (MQ=255)
                                              cTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTg                                                        >  2:1094549/1‑101 (MQ=255)
                                                 ccTTTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCAt                                                                                                    <  2:1093884/54‑1 (MQ=255)
                                                 ccTTTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACt                                                         <  2:1094159/97‑1 (MQ=255)
                                                  cTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGAttt                                                    >  1:1094554/1‑101 (MQ=255)
                                                   tgttgtAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGAtttt                                                   <  2:1093925/101‑1 (MQ=255)
                                                   tgttgtAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGAtttt                                                   <  2:1094086/101‑1 (MQ=255)
                                                   tgttgtAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGAtttt                                                   <  1:1093940/101‑1 (MQ=255)
                                                    gttgtAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTc                                                  <  1:1094139/101‑1 (MQ=255)
                                                    gttgtAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTc                                                  >  2:1094557/1‑101 (MQ=255)
                                                    gttgtAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTc                                                  <  1:1093782/101‑1 (MQ=255)
                                                     ttgtAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCt                                                 <  2:1093973/101‑1 (MQ=255)
                                                     ttgtAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGAtt                                                     <  2:1094277/97‑1 (MQ=255)
                                                      tgtAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTg                                                >  2:1094562/1‑101 (MQ=255)
                                                       gtAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGc                                               <  1:1093967/101‑1 (MQ=255)
                                                          gCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAg                                            >  2:1094566/1‑101 (MQ=255)
                                                            cAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGgc                                          >  1:1094568/1‑101 (MQ=255)
                                                             aGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTgg                                                                                                 <  1:1094038/45‑1 (MQ=255)
                                                                gATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGgccgcc                                      >  2:1094577/1‑101 (MQ=255)
                                                                gATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGgccgcc                                      >  1:1094573/1‑101 (MQ=255)
                                                                gATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGgc                                          <  2:1093946/97‑1 (MQ=255)
                                                                  tCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAg                                    >  1:1094581/1‑101 (MQ=255)
                                                                   cgcgAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGgcagcagca                                                                                         <  1:1093947/47‑1 (MQ=255)
                                                                   cgcgAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGt                                   >  2:1094582/1‑101 (MQ=255)
                                                                    gcgAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTg                                  >  2:1094586/1‑101 (MQ=255)
                                                                     cgAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTg                                                               >  1:1094590/1‑71 (MQ=255)
                                                                      gAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGc                                 <  2:1094074/100‑1 (MQ=255)
                                                                      gAGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCg                                >  2:1094594/1‑101 (MQ=255)
                                                                       aGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGAt                                                                                  <  2:1094003/50‑1 (MQ=255)
                                                                       aGCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCgg                               >  1:1094596/1‑101 (MQ=255)
                                                                        gCCGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGt                              >  2:1094599/1‑101 (MQ=255)
                                                                          cGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTgg                            <  2:1094177/101‑1 (MQ=255)
                                                                          cGCACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTgg                            <  2:1094039/101‑1 (MQ=255)
                                                                           gCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGc                           >  1:1094603/1‑101 (MQ=255)
                                                                            cACCATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCg                          <  2:1094187/101‑1 (MQ=255)
                                                                              ccATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTa                        <  2:1094395/101‑1 (MQ=255)
                                                                              ccATTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGAtt                                                     <  2:1093904/72‑1 (MQ=255)
                                                                                aTTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGt                      <  1:1093921/101‑1 (MQ=255)
                                                                                aTTTCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGt                      >  2:1094607/1‑101 (MQ=255)
                                                                                  ttCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTcc                    >  2:1094614/1‑101 (MQ=255)
                                                                                  ttCCTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTcc                    >  1:1094613/1‑101 (MQ=255)
                                                                                    ccTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTc                  <  2:1093813/101‑1 (MQ=255)
                                                                                     cTGCCGCCTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCa                 >  2:1094620/1‑101 (MQ=255)
                                                                                         cgccTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCt             <  2:1094133/101‑1 (MQ=255)
                                                                                          gccTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTg            >  1:1094623/1‑101 (MQ=255)
                                                                                           ccTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTGa           >  2:1094626/1‑101 (MQ=255)
                                                                                            cTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTGAt          >  1:1094629/1‑101 (MQ=255)
                                                                                            cTGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTGAt          <  1:1094098/101‑1 (MQ=255)
                                                                                             tGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTGATa         <  1:1094056/101‑1 (MQ=255)
                                                                                             tGGGCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGCCCTCAACCTGATa         >  2:1094631/1‑101 (MQ=255)
                                                                                               ggcggcATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTGATACg       >  1:1094639/1‑101 (MQ=255)
                                                                                               ggcggcATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTGATACg       >  2:1094638/1‑101 (MQ=255)
                                                                                                gCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCg                                <  1:1094273/75‑1 (MQ=255)
                                                                                                gCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTGATACGc      <  2:1093970/101‑1 (MQ=255)
                                                                                                gCGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTGATACGc      >  1:1094643/1‑101 (MQ=255)
                                                                                                 cGGCATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTGATACGcc     <  1:1094089/101‑1 (MQ=255)
                                                                                                   gTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCTGTGGCGTAGTCCTCAACCTGATACGCCTg   <  2:1094023/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
GCATGCAGCCACCAGTAGAGGGCATTGCTTCCCAGTCCACGTTTTTCTGCCTGTTGTAGCCAGCGATCGCGAGCCGCACCATTTCCTGCCGCCTGGGCGGTATTGGCAGCAGCAAGCAGATCCTCATTGCTCATGTCGTGAAGACTGATTTTCTGCCAGGCCGCCAGTGCGGTGGCGTAGTCCTCAACCTGATACGCCTGA  >  NC_000913/589195‑589395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑