BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	664,090	G→A	intergenic (‑127/+12)	dacA ← / ← rlpA	D‑alanyl‑D‑alanine carboxypeptidase DacA/rare lipoprotein RlpA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	664,090	0	G	A	100.0%	1560.6 / NA	375	intergenic (‑127/+12)	dacA/rlpA	D‑alanyl‑D‑alanine carboxypeptidase DacA/rare lipoprotein RlpA
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (174/201); total (174/201)

Only 100 of 375 total aligned reads displayed.

TTAAAAAAGTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATGCCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTCGGCTTTGCTGGCGA  >  NC_000913/663992‑664187

ttAAAAAAGTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATAcc                                                                                                 >  1:1231981/1‑101 (MQ=255)

ttAAAAAAGTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATAcc                                                                                                 <  1:1231499/101‑1 (MQ=255)

  aaaaaaGTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTg                                                                                               <  2:1231473/101‑1 (MQ=255)

  aaaaaaGTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTg                                                                                               <  1:1231831/101‑1 (MQ=255)

  aaaaaaGTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTg                                                                                               >  1:1231987/1‑101 (MQ=255)

  aaaaaaGTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCACGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTg                                                                                               >  2:1231984/1‑101 (MQ=255)

     aaaGTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCtt                                                                                            >  1:1231994/1‑101 (MQ=255)

     aaaGTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCtt                                                                                            <  2:1231429/101‑1 (MQ=255)

      aaGTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCttt                                                                                           >  2:1231996/1‑101 (MQ=255)

        gTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTAc                                                                                         >  1:1232000/1‑101 (MQ=255)

         tGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACg                                                                                        <  2:1231668/101‑1 (MQ=255)

           cccTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCt                                                                                      >  1:1232004/1‑101 (MQ=255)

           cccTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCt                                                                                      <  1:1231270/101‑1 (MQ=255)

              tactaTAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACt                                                                                   >  2:1232009/1‑101 (MQ=255)

                 tataGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTgcg                                                                                >  1:1232015/1‑101 (MQ=255)

                 tataGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTgcg                                                                                <  2:1231446/101‑1 (MQ=255)

                 tataGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTgcg                                                                                >  2:1232017/1‑101 (MQ=255)

                    aGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCgg                                                                             <  1:1231576/101‑1 (MQ=255)

                     gCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGgt                                                                            >  1:1232026/1‑101 (MQ=255)

                      cAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGgta                                                                           >  2:1232028/1‑101 (MQ=255)

                        aaTGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGgtagt                                                                         >  1:1232033/1‑101 (MQ=255)

                         aTGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGgtagta                                                                        <  1:1231172/101‑1 (MQ=255)

                         aTGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGgtagta                                                                        <  1:1231526/101‑1 (MQ=255)

                           gCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGtaat                                                                      >  2:1232039/1‑101 (MQ=255)

                           gCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGtaat                                                                      >  1:1232038/1‑101 (MQ=255)

                             aCTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGtaataa                                                                    <  1:1231809/101‑1 (MQ=255)

                              cTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATaaa                                                                   <  2:1231203/101‑1 (MQ=255)

                               tACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAAt                                                                  >  2:1232044/1‑101 (MQ=255)

                                 ccGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGa                                                                >  1:1232048/1‑101 (MQ=255)

                                 ccGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGa                                                                <  1:1231307/101‑1 (MQ=255)

                                  cGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGAc                                                               >  2:1232050/1‑101 (MQ=255)

                                   ggcaggcaTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACt                                                              <  1:1231550/101‑1 (MQ=255)

                                     caggcaTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGt                                                            >  1:1232056/1‑101 (MQ=255)

                                      aggcaTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTa                                                           <  2:1231515/101‑1 (MQ=255)

                                      aggcaTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTa                                                           >  2:1232058/1‑101 (MQ=255)

                                      aggcaTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTa                                                           <  1:1231405/101‑1 (MQ=255)

                                       ggcaTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTaa                                                          <  1:1231644/101‑1 (MQ=255)

                                       ggcaTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTaa                                                          <  2:1231738/101‑1 (MQ=255)

                                         caTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCttt                                                                                           <  2:1231551/66‑1 (MQ=255)

                                         caTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAAtt                                                        <  1:1231230/101‑1 (MQ=255)

                                         caTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAAtt                                                        <  2:1231130/101‑1 (MQ=255)

                                         caTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAAtt                                                        >  1:1232064/1‑101 (MQ=255)

                                          aTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTg                                                       <  1:1231731/101‑1 (MQ=255)

                                          aTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTg                                                       >  2:1232067/1‑101 (MQ=255)

                                          aTCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTg                                                       <  1:1231490/101‑1 (MQ=255)

                                           tCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTgg                                                      <  2:1231361/101‑1 (MQ=255)

                                           tCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTgg                                                      <  2:1231594/101‑1 (MQ=255)

                                            cTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTggg                                                     <  1:1231741/101‑1 (MQ=255)

                                            cTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTggg                                                     <  2:1231626/101‑1 (MQ=255)

                                             tGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGc                                                    <  1:1231512/101‑1 (MQ=255)

                                             tGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGc                                                    <  2:1231640/101‑1 (MQ=255)

                                              gACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCt                                                   >  1:1232071/1‑101 (MQ=255)

                                              gACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCt                                                   <  1:1231377/101‑1 (MQ=255)

                                              gACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCt                                                   >  2:1232072/1‑101 (MQ=255)

                                                cTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTc                                                 <  2:1231340/101‑1 (MQ=255)

                                                 tttCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCg                                                <  1:1231475/101‑1 (MQ=255)

                                                  ttCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCgg                                               >  1:1232078/1‑101 (MQ=255)

                                                  ttCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCgg                                               <  1:1231591/101‑1 (MQ=255)

                                                    ccGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGtt                                             <  2:1231570/101‑1 (MQ=255)

                                                     cgcgTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGttt                                            <  2:1231586/101‑1 (MQ=255)

                                                       cgTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGc                                          >  1:1232083/1‑101 (MQ=255)

                                                        gTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCa                                         <  1:1231289/101‑1 (MQ=255)

                                                         tGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCaa                                        <  2:1231489/101‑1 (MQ=255)

                                                         tGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCaa                                        >  1:1232087/1‑101 (MQ=255)

                                                          gACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCaaa                                       <  2:1231350/101‑1 (MQ=255)

                                                           aCTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAAc                                      >  2:1232089/1‑101 (MQ=255)

                                                           aCTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAAc                                      <  1:1231660/101‑1 (MQ=255)

                                                           aCTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAAc                                      >  1:1232091/1‑101 (MQ=255)

                                                            cTTTGTTAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACg                                     >  1:1232095/1‑101 (MQ=255)

                                                                 ttAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTtgct                                <  2:1232006/101‑1 (MQ=255)

                                                                  tAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTtgctg                               <  2:1231609/101‑1 (MQ=255)

                                                                  tAACGTCATTTACAGAAATTGACACATCAGATACCTGCTTAACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTtgctg                               <  2:1231754/101‑1 (MQ=255)

                                                                   aaCGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTtgctgc                              >  2:1232102/1‑101 (MQ=255)

                                                                   aaCGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTtgctgc                              <  1:1231441/101‑1 (MQ=255)

                                                                     cGTCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCaa                            >  1:1232104/1‑101 (MQ=255)

                                                                       tCATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAgg                          <  2:1231303/101‑1 (MQ=255)

                                                                        cATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGt                         <  2:1231711/101‑1 (MQ=255)

                                                                        cATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGt                         >  1:1232111/1‑101 (MQ=255)

                                                                        cATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGt                         <  1:1231566/101‑1 (MQ=255)

                                                                        cATTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGt                         >  2:1232110/1‑101 (MQ=255)

                                                                         aTTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAg                           <  2:1231696/98‑1 (MQ=255)

                                                                         aTTTACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTa                        >  2:1232114/1‑101 (MQ=255)

                                                                            tACAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTg                     <  1:1231695/101‑1 (MQ=255)

                                                                             aCAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTgg                    <  2:1231418/101‑1 (MQ=255)

                                                                             aCAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTg                     >  1:1232120/1‑100 (MQ=255)

                                                                              cAGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGc                   >  2:1232122/1‑101 (MQ=255)

                                                                               aGAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCt                  >  2:1232126/1‑101 (MQ=255)

                                                                                gAAATTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCtt                 <  1:1231613/101‑1 (MQ=255)

                                                                                 aaaTTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTc                >  2:1232131/1‑101 (MQ=255)

                                                                                  aaTTGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTCg               <  1:1231093/101‑1 (MQ=255)

                                                                                     tGACACATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACt                      >  1:1232133/1‑91 (MQ=255)

                                                                                       acacATCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTCGGCttt          <  2:1231531/101‑1 (MQ=255)

                                                                                        cacaTCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAgg                          >  2:1232138/1‑84 (MQ=255)

                                                                                         acaTCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTCGGCTTTGc        >  1:1232140/1‑101 (MQ=255)

                                                                                            tCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTCGGCTTTGCTgg     <  1:1231750/101‑1 (MQ=255)

                                                                                            tCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTCGGCTTTGCTgg     <  1:1231630/101‑1 (MQ=255)

                                                                                            tCAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTCGGCTTTGCTgg     >  2:1232146/1‑101 (MQ=255)

                                                                                             cAGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTCGGCttt          >  2:1232150/1‑95 (MQ=255)

                                                                                              aGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTCGGCTTTGCTGGCg   >  1:1232153/1‑101 (MQ=255)

                                                                                              aGATACCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTCGGCTTTGCTGGCg   <  1:1231970/101‑1 (MQ=255)

TTAAAAAAGTGCCCTACTATAGCAAATGCACTACCGGCAGGCATCTGACTTTCCGCGTGACTTTGTTAACGTCATTTACAGAAATTGACACATCAGATGCCTGCTTTACGCTACTGCGCGGTAGTAATAAATGACTGTAATTGGGCTTCGGTTTGCAAACGTTGCTGCAAGGTACTGGCTTCGGCTTTGCTGGCGA  >  NC_000913/663992‑664187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`