BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,940,196	T→C	intergenic (‑3/+117)	lpxM ← / ← mepM	myristoyl‑acyl carrier protein‑dependent acyltransferase/peptidoglycan DD‑endopeptidase MepM

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,940,196	0	T	C	100.0%	1577.7 / NA	366	intergenic (‑3/+117)	lpxM/mepM	myristoyl‑acyl carrier protein‑dependent acyltransferase/peptidoglycan DD‑endopeptidase MepM
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (189/177); total (189/177)

Only 100 of 374 total aligned reads displayed.

CGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACC  >  NC_000913/1940098‑1940293

 gctgctACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCcttt                                                                                                >  2:3551251/1‑101 (MQ=255)

 gctgctACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCcttt                                                                                                <  1:3550790/101‑1 (MQ=255)

   tgctACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTcc                                                                                              >  1:3551253/1‑101 (MQ=255)

        cGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGttt                                                                                         <  1:3550575/101‑1 (MQ=255)

          cccAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCg                                                                                       <  2:3550708/101‑1 (MQ=255)

          cccAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCg                                                                                       >  2:3551260/1‑101 (MQ=255)

           ccAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCgg                                                                                      <  2:3550718/101‑1 (MQ=255)

              gCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATa                                                                                   <  2:3550760/101‑1 (MQ=255)

               ccATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATaa                                                                                  >  1:3551263/1‑101 (MQ=255)

               ccATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATaa                                                                                  <  2:3550798/101‑1 (MQ=255)

                cATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAg                                                                                 <  1:3550877/101‑1 (MQ=255)

                  tGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGc                                                                               <  2:3550783/101‑1 (MQ=255)

                  tGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGc                                                                               >  2:3551267/1‑101 (MQ=255)

                   gCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCa                                                                              <  2:3550865/101‑1 (MQ=255)

                    cTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCaa                                                                             >  2:3551271/1‑101 (MQ=255)

                     tCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAgg                                                                                <  1:3550775/97‑1 (MQ=255)

                     tCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCaaa                                                                            <  1:3550630/101‑1 (MQ=255)

                      ccccAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCaaaa                                                                           <  1:3550639/101‑1 (MQ=255)

                        ccAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAaat                                                                         <  1:3550326/101‑1 (MQ=255)

                         cAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAaatc                                                                        >  1:3551276/1‑101 (MQ=255)

                         cAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAaatc                                                                        >  2:3551275/1‑101 (MQ=255)

                           gTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAaatcaa                                                                      >  2:3551282/1‑101 (MQ=255)

                             aGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAaatcaatc                                                                    >  1:3551284/1‑101 (MQ=255)

                              gcgcGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAaatcaatat                                                                   <  1:3550902/101‑3 (MQ=255)

                              gcgcGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCt                                                                   >  1:3551288/1‑101 (MQ=255)

                               cgcgGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTg                                                                  >  2:3551289/1‑101 (MQ=255)

                                gcgGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTgg                                                                 <  1:3550935/101‑1 (MQ=255)

                                 cgGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGt                                                                >  2:3551295/1‑101 (MQ=255)

                                     tGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATa                                                            <  2:3550688/101‑1 (MQ=255)

                                        cGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAgtg                                                         >  2:3551301/1‑101 (MQ=255)

                                        cGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAgtg                                                         <  1:3550923/101‑1 (MQ=255)

                                         gAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTg                                                               >  1:3551306/1‑94 (MQ=255)

                                         gAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAgtgt                                                        <  2:3550996/101‑1 (MQ=255)

                                         gAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAgtgt                                                        <  1:3550843/101‑1 (MQ=255)

                                          aaaGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTa                                                       <  2:3550628/101‑1 (MQ=255)

                                          aaaGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTa                                                       <  2:3551111/101‑1 (MQ=255)

                                            aGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAgc                                                     >  2:3551309/1‑101 (MQ=255)

                                              gATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAgcgg                                                   >  1:3551313/1‑101 (MQ=255)

                                              gATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAgcgg                                                   >  2:3551314/1‑101 (MQ=255)

                                               aTTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAgcggc                                                  <  2:3550484/101‑1 (MQ=255)

                                                 ttATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGgcgc                                                >  1:3551318/1‑101 (MQ=255)

                                                  tATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCa                                               <  1:3550797/101‑1 (MQ=255)

                                                  tATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCa                                               >  1:3551321/1‑101 (MQ=255)

                                                    tCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAAc                                             >  2:3551325/1‑101 (MQ=255)

                                                     cAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACt                                            <  1:3550746/101‑1 (MQ=255)

                                                      aaaCTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACtt                                           <  2:3550939/101‑1 (MQ=255)

                                                      aaaCTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACtt                                           >  1:3551332/1‑101 (MQ=255)

                                                      aaaCTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACtt                                           <  1:3550526/101‑1 (MQ=255)

                                                       aaCTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTg                                          >  2:3551334/1‑101 (MQ=255)

                                                         cTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGcc                                        >  2:3551341/1‑101 (MQ=255)

                                                          tCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGccc                                       >  2:3551344/1‑101 (MQ=255)

                                                            aGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCg                                     >  2:3551348/1‑101 (MQ=255)

                                                            aGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCg                                     >  1:3551349/1‑101 (MQ=255)

                                                              gAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCa                                   <  2:3550836/101‑1 (MQ=255)

                                                              gAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCa                                   >  1:3551355/1‑101 (MQ=255)

                                                               aaTGTATTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTGGCCCCGCAc                                  >  2:3551357/1‑101 (MQ=255)

                                                                  gTATTCGCTATTATTTTTTTTCGTTTCCAAGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCaa                               >  2:3551363/1‑101 (MQ=255)

                                                                    aTTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAAt                             >  2:3551366/1‑101 (MQ=255)

                                                                    aTTCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAAt                             <  1:3550892/101‑1 (MQ=255)

                                                                      tCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaa                           <  1:3551000/101‑1 (MQ=255)

                                                                      tCGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaa                           >  1:3551370/1‑101 (MQ=255)

                                                                       cGCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaa                          >  2:3551372/1‑101 (MQ=255)

                                                                        gCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaaa                         >  1:3551377/1‑101 (MQ=255)

                                                                        gCTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaaa                         >  2:3551379/1‑101 (MQ=255)

                                                                         cTATTATTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaaaa                        >  2:3551383/1‑101 (MQ=255)

                                                                          tattatTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaaaaa                       <  2:3550974/101‑1 (MQ=255)

                                                                          tattatTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaaaaa                       <  2:3550875/101‑1 (MQ=255)

                                                                          tattatTTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaaaaa                       >  1:3551387/1‑101 (MQ=255)

                                                                           attattTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaaaaaa                      <  2:3551012/101‑1 (MQ=255)

                                                                           attattTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaaaaaa                      <  1:3550955/101‑1 (MQ=255)

                                                                           attattTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaaaaaa                      <  1:3550982/101‑1 (MQ=255)

                                                                              attTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGcc                                        >  1:3551396/1‑80 (MQ=255)

                                                                              attTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGcc                   >  1:3551392/1‑101 (MQ=255)

                                                                              attTTTTTTCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGcc                   <  1:3550678/101‑1 (MQ=255)

                                                                               ttttttttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCg                  <  2:3550908/101‑1 (MQ=255)

                                                                               ttttttttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCg                  <  2:3550740/101‑1 (MQ=255)

                                                                               ttttttttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCg                  <  2:3550806/101‑1 (MQ=255)

                                                                               ttttttttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCg                  >  2:3551398/1‑101 (MQ=255)

                                                                                tttttttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCgg                 >  1:3551401/1‑101 (MQ=255)

                                                                                tttttttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCgg                 <  1:3551019/101‑1 (MQ=255)

                                                                                 ttttttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGt                <  1:3550695/101‑1 (MQ=255)

                                                                                  tttttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTa               >  1:3551408/1‑101 (MQ=255)

                                                                                  tttttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTa               <  2:3551189/101‑1 (MQ=255)

                                                                                   ttttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaaaaa                       >  2:3551409/1‑92 (MQ=255)

                                                                                     ttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTactg            <  1:3550945/101‑1 (MQ=255)

                                                                                     ttCGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTactg            >  2:3551413/1‑101 (MQ=255)

                                                                                       cGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTactgac          >  2:3551418/1‑101 (MQ=255)

                                                                                       cGTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTactgac          <  2:3550563/101‑1 (MQ=255)

                                                                                        gTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTactgact         <  1:3551077/101‑1 (MQ=255)

                                                                                        gTTTCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTactgact         >  2:3551423/1‑101 (MQ=255)

                                                                                         tttCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTactgactg        >  1:3551425/1‑101 (MQ=255)

                                                                                         tttCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTactgactg        <  1:3550727/101‑1 (MQ=255)

                                                                                          ttCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGc       >  1:3551429/1‑101 (MQ=255)

                                                                                          ttCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGc       <  1:3550652/101‑1 (MQ=255)

                                                                                          ttCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGAACTGACTGc       <  1:3550829/101‑1 (MQ=255)

                                                                                           tCCATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCg      >  2:3551432/1‑101 (MQ=255)

                                                                                            ccATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGt     >  1:3551437/1‑101 (MQ=255)

                                                                                            ccATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGt     <  1:3551171/101‑1 (MQ=255)

                                                                                             cATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTa    <  2:3551068/101‑1 (MQ=255)

                                                                                             cATGCCTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTa    >  2:3551441/1‑101 (MQ=255)

CGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACC  >  NC_000913/1940098‑1940293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`