| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,815,828 | T→G | intergenic (‑60/+35) | pyrE ← / ← rph | orotate phosphoribosyltransferase/truncated RNase PH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,815,828 | 0 | T | G | 100.0% | 59.7 / NA | 19 | intergenic (‑60/+35) | pyrE/rph | orotate phosphoribosyltransferase/truncated RNase PH |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (6/13); total (6/13) | |||||||||||
TTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAG > NC_000913/3815763‑3815892 | tttCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGaa > 1:1153607/1‑68 (MQ=255)tttCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGaa > 1:1305874/1‑68 (MQ=255)tttCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGaa > 1:2375359/1‑68 (MQ=255) aTGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAAt < 1:423062/68‑1 (MQ=255) tGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATc > 1:2080635/1‑68 (MQ=255) gCCTTCGCTCCTCATCTTAGTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCa < 1:2963357/68‑1 (MQ=255) gCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCa > 1:463416/1‑68 (MQ=255) tcctcATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCa > 1:72926/1‑68 (MQ=255) cctcATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAg < 1:536072/68‑1 (MQ=255) tACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCt < 1:2816597/68‑1 (MQ=255) tACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCt < 1:407095/68‑1 (MQ=255) tCTACAGACAAAAAAAAGCGGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCg < 1:3234275/68‑1 (MQ=255) aCAGACAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCg < 1:1711096/68‑1 (MQ=255) aCAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTAc < 1:421933/68‑1 (MQ=255) cAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACa < 1:3352195/68‑1 (MQ=255) aaaaaaaGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAt < 1:1558287/68‑1 (MQ=255) aaaaaGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATgg < 1:1129132/68‑1 (MQ=255) aaaaaGGCGACTCATCAGTCGCCTGAAAAATCAGTGTGCCAGCGCCGCCTTCTGCGTCGCTACAATgg < 1:3356410/68‑1 (MQ=255) aaGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgatt > 1:3098039/1‑68 (MQ=255) catcaCTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTcccc < 1:909207/68‑1 (MQ=255) gTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCggg < 1:123226/68‑1 (MQ=255) tCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGc < 1:2658148/68‑1 (MQ=255) cGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGcc > 1:2249306/1‑68 (MQ=255) ccTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCag > 1:1096359/1‑68 (MQ=255) | TTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAG > NC_000913/3815763‑3815892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |