| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 458,790 | IS186 (+) +6 bp :: Δ1 bp | intergenic (+90/‑93) | clpX → / → lon | ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 15387 = | NA (NA) | 33 (0.890) | 21/120 | 0.2 | 90.8% | noncoding (1/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | = 458795 | 3 (0.090) | intergenic (+95/‑93) | clpX/lon | ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease | |||||
| * | ? | NC_000913 | 458790 = | 3 (0.090) | 40 (1.060) | 22/122 | 0.2 | 92.3% | intergenic (+90/‑98) | clpX/lon | ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease |
| ? | NC_000913 | = 609350 | NA (NA) | noncoding (1344/1345 nt) | IS186 | repeat region | |||||
AGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/15454‑15387‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggaTGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGATAAAATCCCCCCT < NC_000913/458795‑458733 AGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATG > 1:969335/1‑65AGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATG < 1:2545282/65‑1AGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATG < 1:2770563/65‑1 GTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGG > 1:2214629/1‑65 gAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG < 1:1939827/64‑1 TAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG < 1:2620917/65‑1 TAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG < 1:1478529/65‑1 TAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG < 1:789286/65‑1 TAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG < 1:2746854/65‑1 TAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG < 1:2907381/65‑1 TAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG < 1:2102503/65‑1 AATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGA < 1:1068754/65‑1 AATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGA < 1:2892752/65‑1 AATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGA > 1:842397/1‑65 TTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATG < 1:73417/65‑1 TCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATGT < 1:793585/65‑1 TCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATGT < 1:1848130/65‑1 CGGCACATTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCC < 1:1340870/65‑1 TTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACAT < 1:404031/65‑1 TCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAAC > 1:279237/1‑65 TCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAAC > 1:2691111/1‑65 TCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAAC > 1:408153/1‑65 TCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAAC > 1:2638964/1‑65 TCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAAC > 1:1705516/1‑65 ATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGC < 1:197185/65‑1 AGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGA < 1:1794575/65‑1 CGTAACACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATA > 1:1478365/1‑65 TACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGA > 1:2399763/1‑65 ACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCGCATTCAACGCCGAGAATAGAGGAA > 1:2559235/1‑65 ACCACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAA > 1:1302587/1‑65 ACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACGTTCAACGCCGAGAATAGAGGAAAAA < 1:1802561/65‑1 ACAACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAA > 1:2648080/1‑65 ACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTA > 1:1285813/1‑65 ACCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTA > 1:628033/1‑65 CCCTTAAGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAA > 1:2239938/1‑65 TTAATTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGG < 1:2342143/65‑1 AGTTAGCGTTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGA > 1:890080/1‑65 AGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGA > 1:1792463/1‑65 AGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGA > 1:960980/1‑65 AGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATAAAAGGGGA > 1:2986373/1‑65 AGTTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGCAAAAATTAAAGGGGA > 1:224033/1‑65 TTAGCGCTTATGTGATGTTTCCCCCACCTTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGA < 1:3100981/65‑1 TTAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGA > 1:151166/1‑65 TAGCGCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGAT < 1:335001/65‑1 GCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGATAAAA > 1:597862/1‑65 GCTTATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGATAAAA > 1:294639/1‑65 TATGGGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGATAAAATCC < 1:2029908/65‑1 GGATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGATAAAATCCCCCC < 1:2705973/65‑1 GATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGATAAAATCCCCCCT > 1:352305/1‑65 GATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGATAAAATCCCCCCT > 1:2991563/1‑65 GATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGATAAAATCCCCCCT > 1:1832399/1‑65 GATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGATAAAATCCCCCCT > 1:271848/1‑65 GATGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGATAAAATCCCCCCT < 1:2340336/65‑1 AGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/15454‑15387‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggaTGTTTCCCCCACATTCAACGCCGAGAATAGAGGAAAAATTAAAGGGGAGATAAAATCCCCCCT < NC_000913/458795‑458733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |