| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 1,619,100 | Δ20 bp | intergenic (‑192/‑1) | marC ← / → marR | inner membrane protein MarC/DNA‑binding transcriptional repressor MarR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1619099 | 2 (0.050) | 69 (2.020) | 29/110 | 0.0 | 97.4% | intergenic (‑191/‑21) | marC/marR | inner membrane protein MarC/DNA‑binding transcriptional repressor MarR |
| ? | NC_000913 | 1619120 = | 2 (0.060) | coding (1/435 nt) | marR | DNA‑binding transcriptional repressor MarR | |||||
GCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1619027‑1619099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTA > NC_000913/1619120‑1619183 GCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTG > 1:1754086/1‑65 CAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGC > 1:2452332/1‑65 cagACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCA < 1:1565318/62‑1 AAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCA > 1:231063/1‑65 AAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTACCCCCTGCA < 1:2557020/65‑1 AAAACGTGGCATCGGTCAAGTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCA < 1:332076/65‑1 ACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACT > 1:3154395/1‑65 GGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATG < 1:1567889/65‑1 ATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGA > 1:265342/1‑65 ATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGA > 1:2681024/1‑65 TCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGT < 1:2553805/65‑1 TCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGT < 1:2344190/65‑1 TCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGT < 1:1216596/65‑1 ATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACC < 1:2944117/65‑1 TCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAG > 1:1743883/1‑65 TCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAG > 1:530187/1‑65 CATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGC < 1:18859/65‑1 TTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGA > 1:2370000/1‑65 TTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGA < 1:1854109/65‑1 TTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGT < 1:1390507/65‑1 TTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGT > 1:1071698/1‑65 ACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCA < 1:3159643/65‑1 CTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAA > 1:2888631/1‑65 TACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAA < 1:2528829/65‑1 ACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAA > 1:3060802/1‑65 ACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAA > 1:1705155/1‑65 ACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAA > 1:816075/1‑65 CTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAAT > 1:2502930/1‑65 TTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATT < 1:2864216/65‑1 GCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTAT < 1:2916541/65‑1 CCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATT > 1:1658614/1‑65 CCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATT > 1:765824/1‑65 CCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATT > 1:97896/1‑65 TGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCC < 1:2967690/65‑1 GGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCA > 1:3091905/1‑65 GCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATT > 1:104577/1‑65 GCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATT > 1:3242156/1‑65 GCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATT > 1:2124040/1‑65 ATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTC > 1:2302749/1‑65 ATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTC > 1:2977185/1‑65 ATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTC > 1:1225265/1‑65 ATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTC > 1:1691757/1‑65 ATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTC > 1:709245/1‑65 ATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTC > 1:1756391/1‑65 ATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTC > 1:866219/1‑65 ATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTC > 1:1985084/1‑65 ATTATCCCCTGCAACTAACGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTC > 1:1926341/1‑65 TTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCG < 1:2287874/65‑1 TTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCG < 1:555193/65‑1 TATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGC < 1:1927092/65‑1 TATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGC < 1:1335493/65‑1 TATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGC < 1:810983/65‑1 TATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGC < 1:570230/65‑1 TATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGC < 1:1705289/65‑1 TATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGC < 1:1761505/65‑1 TATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGC < 1:2549823/65‑1 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:747877/1‑65 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:422479/1‑65 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:1131630/1‑65 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:1061161/1‑65 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:144568/1‑65 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:478395/1‑65 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:1127577/1‑65 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:2997831/1‑65 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:1648030/1‑65 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:2659387/1‑65 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:1968763/1‑65 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:1993099/1‑65 CCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAAT < 1:1362286/65‑1 CCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAAT > 1:361752/1‑65 CCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAAT < 1:231746/65‑1 CTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC < 1:1259499/65‑1 TGCAGCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCC < 1:633769/65‑1 TGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCC < 1:1263425/65‑1 TGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCC < 1:1706919/65‑1 TGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCC < 1:2543209/65‑1 AACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATA < 1:1745918/65‑1 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATG > 1:3002043/1‑65 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATG < 1:1056011/65‑1 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATG > 1:611806/1‑65 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATG < 1:3153745/65‑1 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATG > 1:129795/1‑65 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATG < 1:2917088/65‑1 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATG > 1:2374545/1‑65 TGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTA > 1:39514/1‑65 TGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTA > 1:344743/1‑65 TGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTA > 1:1033130/1‑65 GCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1619027‑1619099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTA > NC_000913/1619120‑1619183 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |