| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,625,502 | Δ204 bp | coding (608‑811/969 nt) | serB → | phosphoserine phosphatase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4625502 | 4625705 | 204 | 24 [0] | [0] 24 | serB | phosphoserine phosphatase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4625501 | 0 (0.000) | 21 (0.450) | 15/108 | 0.7 | 100% | coding (607/969 nt) | serB | phosphoserine phosphatase |
| ? | NC_000913 | 4625706 = | 0 (0.000) | coding (812/969 nt) | serB | phosphoserine phosphatase | |||||
ATCTGCCGCTGATGCCAGGCTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4625430‑4625501‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcgattgGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGCTGGGGATTGCCTACCATGCCAA > NC_000913/4625706‑4625769 ATCTGCCGCTGATGCCAGGCTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGag > 1:4039886/1‑63 CTGATGCCAGGCTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGG > 1:3254757/1‑65 ATGCCAGGCTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGA < 1:2897403/65‑1 GCCAGGCTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATc > 1:3086039/1‑64 CCAGGCTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGG < 1:2085576/65‑1 CAGGCTTAACGCAACTGGTGCTCAAGCTGGAACCGCTGGGCTGGAAATTGGCGATTGGCGATGGA < 1:1294472/65‑1 GGCTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGC > 1:4130659/1‑65 GGCTTAACGCAACTGGTGCTCAAGCTGGAAACCCTGGGCTGGAAAGTGGCGATTGGCGATGGAGC < 1:906025/65‑1 CTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGCCA > 1:970265/1‑65 CTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGCCA > 1:1778798/1‑65 CTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGCCA > 1:540227/1‑65 CTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGCGGCGATTGGCGATGGAGCCA > 1:2856398/1‑65 CTTAACGCAACTGGTGCTCAAGCCGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGCCA > 1:4078394/1‑65 TAACGCACCTGGTGCTCAAGCTGGAGACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGCCAAT < 1:1477884/65‑1 GCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGCCAATGACC > 1:4098838/1‑65 ACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGCCAATGACCctg > 1:3144736/1‑62 ACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGCCAATGACCTGC > 1:2730589/1‑65 CTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGCCAATGACCTGCC > 1:3897856/1‑65 CTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGAT > 1:3616361/1‑65 CTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGAT > 1:2701688/1‑65 GCTGGAAAGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGCTGGGG > 1:2245364/1‑65 AAAGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGCCGGGGATTGC > 1:148284/1‑65 GTGGCGTTTGGCGATGGAGCCATTGCCCTGCCGATGATCAAAGCGGCAGGGCTGGGGATTGCCTA < 1:2926292/65‑1 CGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGCTGGGGGTTGCCTACCAT > 1:1820395/1‑65 GGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGCTGGGGATTGCCTACCATGCCAA > 1:2860152/1‑65 ATCTGCCGCTGATGCCAGGCTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4625430‑4625501‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcgattgGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGCTGGGGATTGCCTACCATGCCAA > NC_000913/4625706‑4625769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |