| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,185,993 | Δ18 bp | coding (644‑661/4224 nt) | rpoC → | RNA polymerase subunit beta' |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4185993 | 4186010 | 18 | 80 [0] | [0] 78 | rpoC | RNA polymerase subunit beta' |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4185992 | 0 (0.000) | 74 (1.470) | 30/108 | 0.1 | 100% | coding (643/4224 nt) | rpoC | RNA polymerase subunit beta' |
| ? | NC_000913 | 4186011 = | 0 (0.000) | coding (662/4224 nt) | rpoC | RNA polymerase subunit beta' | |||||
GAGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4185919‑4185992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTT > NC_000913/4186011‑4186072 GAGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAA < 1:2420948/65‑1 AGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAAg > 1:3431906/1‑64 AGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAAC > 1:2668101/1‑65 AGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAAC > 1:2716965/1‑65 AGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAAC > 1:4491402/1‑65 AGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAAC > 1:2907713/1‑65 AGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAAC > 1:2296377/1‑65 AGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAAC > 1:3538757/1‑65 AGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAAC > 1:1562793/1‑65 ATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAA > 1:3418135/1‑65 ATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAA > 1:1580684/1‑65 ATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGT < 1:310967/65‑1 ATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGT < 1:156294/65‑1 TCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTA > 1:4306431/1‑65 TCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTA > 1:3220877/1‑65 AGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAc > 1:1657079/1‑64 AGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAA > 1:1082615/1‑65 AGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAA > 1:814457/1‑65 AGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAA > 1:3593721/1‑65 AGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAA > 1:3106206/1‑65 AGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAA > 1:1282966/1‑65 AGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAA > 1:4087195/1‑65 AGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGCATCAAA > 1:2782085/1‑65 AGCAAGAGCGCGAACAGCTGCGTGAAGAGCTGAACGAAACCCACACCGAACCGAAGCGTATCAAA > 1:3639758/1‑65 AGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGC < 1:2142475/65‑1 AGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTG > 1:1413185/1‑65 AGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTG > 1:1183541/1‑65 AGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTG > 1:3286592/1‑65 AGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTG > 1:2231093/1‑65 AGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTG > 1:3213454/1‑65 GAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAGCCAAGCGGATCAAACTGCTGGAAGC < 1:2376130/65‑1 GAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGC > 1:4648846/1‑65 AACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCG < 1:3489249/65‑1 AACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCG < 1:818539/65‑1 AACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCG < 1:4322362/65‑1 AACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCG < 1:2353196/65‑1 ACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGT > 1:28976/1‑65 ACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGT > 1:410196/1‑65 CTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGT < 1:4656426/65‑1 TGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTT > 1:2896231/1‑65 GTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAG > 1:137826/1‑65 TGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGT < 1:2798740/65‑1 TGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGT < 1:3923340/65‑1 TGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGT < 1:2331879/65‑1 TGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGT < 1:3315469/65‑1 GAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATGAAACTGCTGGAAGCGTTCGTTCAGTC > 1:4118917/1‑65 GAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTC > 1:1419656/1‑65 GAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTC > 1:2247487/1‑65 GAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTC > 1:4051829/1‑65 GAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTC > 1:4213513/1‑65 GAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTC > 1:566284/1‑65 GAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTC < 1:4251503/65‑1 AGAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTG > 1:1281871/1‑65 GAGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGG > 1:1292173/1‑65 AGCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGT > 1:176376/1‑65 GCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTA > 1:3597413/1‑65 GCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTA < 1:3531792/65‑1 GCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTA > 1:2424575/1‑65 GCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTA < 1:4586762/65‑1 GCTGAACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTA < 1:2091679/65‑1 AACGAAACCAACTCCGGAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAA < 1:3198104/65‑1 ACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAGGCGTTCGTTCAGTCTGGTAACAAc > 1:3977755/1‑64 ACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAA < 1:1035088/65‑1 ACGAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAA < 1:177643/65‑1 GAAACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACC < 1:3325486/65‑1 ACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGA < 1:3493204/65‑1 ACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGA < 1:3492602/65‑1 ACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGA < 1:536113/65‑1 ACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGA < 1:2493561/65‑1 ACCAACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGA > 1:2569021/1‑65 ACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGG < 1:4603038/65‑1 ACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGG < 1:4502871/65‑1 ACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGG < 1:1254631/65‑1 ACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGG < 1:4458772/65‑1 ACTCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGG < 1:3246937/65‑1 TCCGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGCGGAT > 1:2854502/1‑65 CGAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGA < 1:335917/65‑1 GAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGAT < 1:759004/65‑1 GAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGAT < 1:4788725/65‑1 GAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGAT < 1:784995/65‑1 GAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGAT < 1:1178033/65‑1 GAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGAT < 1:1007449/65‑1 GAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGAT < 1:3739219/65‑1 GAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGAT < 1:2166364/65‑1 GAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGAT < 1:238137/65‑1 GAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGAT < 1:2394104/65‑1 GAAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGAT < 1:336647/65‑1 AAACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATC < 1:3739918/65‑1 AACCAAGCGTATCACACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCC > 1:1243117/1‑65 ACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCT > 1:835020/1‑65 GCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCG < 1:3187217/65‑1 CGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGT > 1:4363149/1‑65 GTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTT > 1:394057/1‑65 GAGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4185919‑4185992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTT > NC_000913/4186011‑4186072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |