| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 459,457 | Δ12 bp | coding (570‑581/2355 nt) | lon → | Lon protease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 459456 | 2 (0.040) | 50 (0.940) | 26/126 | 0.2 | 97.1% | coding (569/2355 nt) | lon | Lon protease |
| ? | NC_000913 | 459469 = | 1 (0.020) | coding (582/2355 nt) | lon | Lon protease | |||||
ATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/459392‑459456‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTC > NC_000913/459469‑459527 agTGCTGCACATATGCGGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAA < 1:3706700/63‑1ATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAA > 1:341403/1‑65ATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAA < 1:1403664/65‑1 GCTGCACATATGCCGCTGAAACTGGCTGACAAACAGCCTGTTCTGGAGATGTCCGACGTTAAATA > 1:2559708/1‑65 TGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATC > 1:1275100/1‑65 TGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATC > 1:2743377/1‑65 TGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATC > 1:426372/1‑65 TGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTCAAATctg > 1:2326699/1‑62 ACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGA > 1:1068981/1‑65 ACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGA > 1:2422876/1‑65 ACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGA < 1:1957561/65‑1 ACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGA < 1:1585693/65‑1 ATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATG > 1:2495178/1‑65 ATATGCCACTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATG > 1:704984/1‑65 TATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGG < 1:2626977/65‑1 TATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGG < 1:2583464/65‑1 ATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGC < 1:3594928/65‑1 ACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAAT > 1:468084/1‑65 ACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAAT > 1:403267/1‑65 ACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAAT > 1:4179635/1‑65 ACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAAT < 1:1344977/65‑1 CTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATC > 1:151701/1‑65 CTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATC > 1:1348611/1‑65 GCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGA > 1:1945192/1‑65 GCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGA > 1:803059/1‑65 AACAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGAT < 1:1789772/65‑1 CAGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCT < 1:1478663/65‑1 AGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTG > 1:3791054/1‑65 AGTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTG > 1:1600794/1‑65 GTCTGTTCTGGAGATGTCCGACGTTAAGTATCTGATGGCAATGATGGAATCGGAAATCGATCTGC < 1:2538268/65‑1 GTCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGC < 1:2880055/65‑1 TCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCT > 1:4336261/1‑65 TCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCT > 1:441218/1‑65 TCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCT > 1:1194062/1‑65 TCTGTTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCT > 1:2943450/1‑65 TTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAG > 1:3908773/1‑65 TTCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAG > 1:4048937/1‑65 TCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGG > 1:3845725/1‑65 TCTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGG > 1:2164827/1‑65 CTGGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGT < 1:4052755/65‑1 GGAGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTG > 1:2660556/1‑65 AGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAG > 1:3165098/1‑65 AGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAG > 1:128885/1‑65 AGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAG > 1:1339102/1‑65 AGATGTCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAG > 1:2108103/1‑65 TCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACG > 1:912868/1‑65 TCCGACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACG > 1:4330332/1‑65 TCCGACGTTAAATAGCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACG < 1:2381774/65‑1 GACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCAT < 1:4335758/65‑1 GACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCAT < 1:3292988/65‑1 GACGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCAT > 1:3258763/1‑65 CGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTC > 1:223530/1‑65 CGTTAAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTC > 1:2354603/1‑65 ATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/459392‑459456‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTC > NC_000913/459469‑459527 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |